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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0190300 |
| Transcript ID | LotjaGi4g1v0190300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tobamovirus multiplication protein 2A; TAIR: AT1G32400.1 tobamovirus multiplication 2A; Swiss-Prot: sp|Q9C5W7|TOM2A_ARATH Tobamovirus multiplication protein 2A; TrEMBL-Plants: tr|I3SIX7|I3SIX7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0190300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:43606103..43614384) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTACACCCAAAATTCTAGTGTCTACTATTTCCTTCAAGTGCGTGCGTGCACAAACGACATCCAAAGCCGACGTCGT ATTGTACCACAAGAATCTGTTATGCGGTGAAGGGCATTAATGTCATTTGACATGTTTCTTTCTTTCTTTTTCGATTTTCC TCAGTGATGTCCATTTTGTTCCAGTCACGGTTACTTTTTCTTCCCCTTTCTATTTGGCTTTCGGTGATCCCAAAGGGTAT CGATCACTGTACAAATCTTCGATTCTCTCTGTGAGTAACTGCACTTTCTTCCTTCTATGCATCACAGCTCTCTTCGTCAT TTTTTTTCAATTTTCTTACCTTTTTTTTCTACCTTGCCTGTTTTGCATTTTGATTTTCAGTTGATCAATTTATTTATTTG TTTTTGCTTGAATTAATGAATCCTCAGTTGATTTTCTGTGGTAGATTTTGTTGCAGGTTCTGGTCAATTGCATTATAAAC ATCATGATCAATATGAAATAAATAAATAAATAATATTTTTGAGGGGAGACATACTTTGTATTGAATATTGACAGAACTGA TTGCTTTCATTAACAGAACATTTTTATTTCTTAAGCTTTCAATTGGGTTTCTTAAAAAATTGTTTTTTTTTTTTGGAATT TTTGAGGTTATATTCATGTGTAAATCAAAAGACTAACTTGTTTGGTGTTTTTTACTAAGGTTGTGAATGGAGAATAAGTT TAGTATCTCTCTTGAAATTGAACCTGAATTGCAGGTGTTATTGTTGTTGTGATAGTTTCCTGTTATTACTGATGTTTTAT GGAAGTGTTTTTTTTTTGTGTGCAGAGAACATATTGGGCATTGGCCAATCTGGTTGAGGGATTGAAGTGGAATTATAGGT AGAGGAGGATGGCTTGTGCTTGTAGGGGTTGCTGGGAGTGCCTTTTGAAGCTTTTGAACTTCTTATTGACCCTTGTTGGT CTGGCCATGGTGGGCTATGGGATTTACCTGCTGGTTGAATTCAGTAAAGCTTCAGATAACACTCTCAGTGTTTCTACTGT CAGTGATGATCAAACTCTAGTTCAACTTGGCCGCCCCATGCTTATGGCTGTGTCTCTGTCCAACAGTTTCTTTGATGATT TGCCCAAGGCCTGGTATAAGTGCTGCTCTACTCAGCCGAATTTTTGGTGTATAGTAGTATGAATTGTTTGTAGCCTTATC GGGTATTATGTAAACTGTAACACTGTTGTTTTTATAAGGAGTTTGCCACTGCAACAGCTTGCTGAATTTTATCTATTAAT GAAATTTGTGCTGAAATTAGAGCCTGCCCTTTTTGGGGGGCTGGGGCTGGGTCAGTTTTCTCTAACATAGTACATCCAAG AGAAACTTTCAGCTTTCTGCCAGAGTTTGATAGGTAACCCCTTTTTTGAGTAGTTAGTTAGTTGTAGATTGTTTGTGAGG ATTAGTTAGAGAGTGAGAGAGGGAATTTTATAAATAAAAGAGTTAGAAAGTATGATTATCTTTGGGATCATTTGTACCAA AAAAAATCTTCGGGATCATTTGCAATTGGGCTCGAAAGATCTCTTGAATATCCGGGAATTTTAATTGTTTTGTCCTTCTT TAGTGATTTTTCCTATCAAATTGGAATTAGAGCCCCATCTAGGTGCTATTGGGTGAATTGTAGTCGATGGTGGGCAAGAA AATAGAAGGGAGACTTGAATCTTTGGAGAAATCATTAGAATCTCTAAACGAAAAATAGGGATAACGACCTGCATATTCAA GCCCAGTGGTTTAAGGTGCTTGAAAGGTGATTTCAGGTACAAGACCAGCTATTCCAGTAATTAGAATCAATGCCGGGAAT TCTGCTTCATGGGAATAAGCCTAACCTCAATCTTGGGGAAAGATCATGGAGTTCTGGGAAGCAGTAGGGAAAGGCGTGCA GGTCGATATGGTTAATGAAGAAAAGGGAGAAGCAGGAATCAGAAGAAAGAATGAAGCTTCCGAGAACCAAGGCATCAACC TTTTGGGTCAACAAAAGACAACAACCACACACTGGGACAAAGCTTTGGGTTGGTGGTATGTCGTCCAAGCAGCCCCCGCT GAAGGCAATGGATGCCAACCCACATGGTAAGGCCTTGTTCCTTGTCAGGGTTGCCGTGGGCTGCAGCTTCTCTTTGGGCA GAGTTGCTAGTAGTGTGCGAGAAACATTTCAATGGCATCTCTGGGTCAAGAAGAACGAGAGGTGCGAGACTGGGATTGCT GATCAAGCGCCCACCGTCAAAACCGCCTTAACCGCCTATGGTGCGAGTACAATGGGTATTGCTACTCCGGTGACAAAGTC AAGGTGAGGAGGGATATGGCCCTGACACTCTTAAAACAGGAAGCTAATTTGTAAGAGGATTCGAGCACATGTGGGAGTGA CGTCATATCAGCTGACCAAGCGGCCACCACCAAAACTGCCTGATGTGAAGGCTTATACACCGGTTGTGTGACGTCATTAG CAACGATCACAAAGGGGACTGTTCGTTGAGGCAGAGAGACTCGTATAACAACTAGGGTGAGTTCCTTGGCAGAGAGGATT ACAGGAGAAGAACTACAGCTTGCGTGTATGACGACCCAACTTCTCCCACTAGAGCGACCAAACCCAAGTCATGGTGCGCA AGAGAAGTGTAATGTGGCGGCCGATAAGACACTTATAATTATGGAGCAATCAAATCTGGGGAGAACATATAGAAGAGGCG CCCATGACCAAATTTCAGACATCAGGTCAGTTTGGCCCATACTTAACTAAGAAGCTTCAAACCCAAGACCGACCTTGGTT CTATTTCTATTCCATGAGTTGCTTCTGCACTTCGGGAGATGACACTGTATGCAATTTCACAAATTGGTCATTGGTGGAAG ATTGTAGGCAGGAATTGCAATACAGATAGGCCTCTTATTCTCAAATCTTAGCCTTGAGACATGGTGAATGTTCAAGTGGG AGAGTATTGGTAGGTAACCCCTTTCTTGCTTATTTAGTCCATTAGTAGATAGTTTGTGGGAGTTAGTTAGAGAGTGAGAG GGGAAATATTATAAACAAGAGCGTTAGAGAGTACGATCATCTTTGGGATCAATTTGTAACTGTGCACTTCAGAGAGACCT CGATCTCTCGAATATCCTGTAGTTTTAATAAATTTTCTTCAAGAAACAGTTCATACTTCTTCTTTAGTGCCTGTTCCTAC CAGAGTTACTTAGGCCATAGGTATTAGACCTCTTAAATTTTAAATAACCTTTATTTCTTCCCCATGTACTGATTTTGGAC CTACTGATGACATCTAGTTTTTTGTGTGACAGAGACAATCACTGACACGGCTACATGTAGTATTTTTAACCTGATAGTTT CTGTCTGCATTCATCCTGATGGAATATTGTCTATTACACATTGCAGTATATTTTACCTGCTAGTTTCTATCTGCATTCAC CCTGATGTAATATTTGCCTCAATACACATTGTTACTTTTACAAGACGCTTACACAGCTCATACTGTTGTCTTTGTACTTT TTTACACTTTGTGTATTTCACGTTTTGCAGGTTTATTTACTTATTCATTGGAATAGGGGTAGTTCTCTTTGTCATTTCTT GTTTTGGTTGTATTGGAGCTATGACGCGGAGTGGCTGCTGCCTGAGCTGTGTATCCTTCCAGAATGTCTTATGCTATAGC TAAATAATTTTGTTCGGCTCATAATTTTTTTACTAGTATGCAAAAGCATCACTTCCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCACACACACACACACACACACACACACGCACACGCACACACACACTCTCACTCAGCGCTTTTCTGTA TCTTTATTCATGGATTAATCTTAAAGAAATGTGATTAGTTTTCCTTAAGCCAACAAAGTTTGCTGTTTTAGTGGTATTGT TGATCTTGGCAGAGCTGGGATGTGCAGCCTTTATATTTTTTGACAAAAGCTGGAAAAAGGCAAGCTCCGCTGGCAATGTA TAATTTGAAATTCTAGAAGTTATAATTGTCCTCTTATGGTTATTTTCTTTCAGGAAATTCCGACAGACAAAACTGGAAAT TTTGATATGATATATGAATTTCTCAGAGAGAACTGGAATATTGTGAGATGGGTCGCTCTTGGAATTGTTATATTTGAGGT AAGTAAGAACTGTTATATGATTGTCATTAAAAAAAAAGAAATATTGTTTTGGGGACATGAATCATGTATGGGTCCTTGTG CATGTACCCATAGGAGGGATTTTCAGTCCTGTCCTGCCGTAGTATGTGCTCCCCTTACAATATTACTGTCTTGACTTTGA AAGTTTCTTTCTGCTACTCTAAAAAATTTTATAGTACGATAGAGAACATATGCAATGCCATATGTTAAAATTTTAGTGGG AGGAACATATATTAGAGATGCACCAAAGATTTTTCTATACCCACAGGTAAGTTTTATATTTTTTTAGAATAAGTGCCTGC AAAGTGCCTTACCATATTTCTTGGCTTACTGTGGTATAACTTCCAGTTCTCATATGTACATTAATGTATTATCACCATCC TGCTAATAGTTTCATAGGAGTTACTTGTTGATGATAATATGATTTTTTTTCGCCAATTTTTGTAATACTTCTTTATTGAT TTAAAGTACACTTTTAGGGATATAGTTCTATAGTGATGTAACTTTTTGAACAAGAAAAATAAATTCGGATTTTTGTTGAT GCTAGGAGAAAGTGAAAATAGGAATAAGAGGGAGAGGAAAGACAGTATAGTGTTCTTCAACTTTGAAATTCAGAAATTTC AGAAACGAAGTGCCTGTCTCAAATTTACTTTACTGCATTGGACAAAATATCCTCTTACCACAGCTCACTTACCTACCACC AGGACTTAGGACTAGAGAAACCAACAGTGGAATAGCTTAGTATTTGTATGTGATACCATGAATGGGATGTGCCCATTGTT TTGTTCATGGAATTGCAGGCTCTTCTTTTTGTGTTAGCCCTTATTGTTCGGGCTGCAAATAGGCCAGCTGACTATGACAG TGATGAAGAATTCATTAATCCTAGGCAGCAAGCCCGTCAGCCTTTGCTCAACAGACCAGCAGCTCCAGCATCAGGTGTAC CAGTTGCGGGCACAATTGATCAGCGTCCAAGCAGAAATGATGCATGGAGTACAAGGATGAGGGAGAAGGTGCAATATTTT GTCTCTGTAGTACTATTTTGATGTGGAACTTTTCATCTGTTGGTCTTTACTGTGGTCTTATAGTGGTCAAGCTCTCTTAG GTGGAGGAGATTCATGGTTCACTTGTCCAGTTGTCCTTTTACATAACAAGTGCAATTGTGTATCCCCTTCTTCCACTAGG GATACCTTAGCTATTAGCTGGCTCACCTTATAATCTTTTAAAATTTAGTGATGTTTCATAGTCCTTTGAGGACTTACTTG CTATAATTTGGCCCTTTTAAAATATGTTCGAGTATCTTAAGTTTAGGTTTGGTTATCGTAAAAGATGCCATGAATGAATT AAAGGGAGCATACAAATATTTTTTTGCATTATTACAAGGTCTGAATATAATGACTTAGCTGAGCTAATTCAGTGTAGAAG TTTTTGAAAGTAGAAATCTCTGAATAAGCTTCCATTAAAAATATTCAATTAGATAGGGAAAAATCATCAAGGAAGTAACA TAATACCTTTCCCTTACTGTCTTGTGTTCCTCGATTTAATGCAAAGCGGTATATCCTGTTTACATAGATATTATGCACGA ACTGTCTTTTTGTCATCGGAGTTTTGGACCATCTCTGGTTGTTGCATAAGAGATGATTGAAGAAGTTACCATTTTATTCT TGTTCTGTAAAATGATCTTGGAATTTTTTATGGCTGTCTGACACTAATGCTGCTCCTTATGCAGTATGGGTTAGATACAT CAGAATTCACATACAACCCATCCGAGTCACAAAGGTTCCAGCAAGTGAACTCACAGCCAACTGAAGAAAGGAGCCGCTGC GCTATAATGTGATCACTTTGGATTGTTCTAAGACTACATCAGGTTGAATTTCAAGGATTGCTTTTGTGGAGACGTTGAGG CTAGAAGTATGTCAGAAAAAACTTCTTCTTTTGCTTAATTTGTGTACCATTCACCCACTTCACTGGATCTTCATCACTTT CAATAACATCTTCATTTTGTTGTGTGTAACATTCTGCTGAGTACATCAAAATTTATTGTGTTGCTTCTGTTCATAGTTAT GGGTAGTAAATGCAGTGGTTAATCCTGTGATGTCAATATTGTGTCGTTTCTATCTCCCTTTTGAAATGGTGTGATCAAAT GGTGGTGCCGTGTGTCTGTGTATGTGGAGATTTTTCGCACACAAGTTAAAATTTAAATATTTATTTGATCTTCTTGATTT TTTTATGGTCTTTTTGCTTTATTGCTTTAATATTGTCAGAAGAGAAAAAAGAAAGAGTGATTCTAATTTTGAATATGATA AATTTTCTATTACAGATTAGTATTTATAGAGCTTCTTTGGCTTGTTACATAAGCAATTGCACTAATAGAATGATAACCAA GTTCTAACAAAATAATAATTAACAACTAACTGCTCAATAGAATATTAACTAACAACTTACTACTTTACTGAGATACTCAC CCTATACTCTAACATTCCTCCTATAAACTCAGATTGTGTTGTAAGAAAGCAACCTGAGTTAATCTCTTAATGTAGAGAAG TGCTGCTTGGAGAGTGCTTTAGTTAAAATATCAGCTATCTGCTCATGAGTTAGTTATGTAACAATCAAGGACTTGACAAG AACCTTTTCTCAAACAAAAATTAGGATTATAGCATATAGAACCATTATACTTCGATTATCATATAAAATAATAGTTGCTG CTCTTACTTTTAGTTCACTTAATCAGGAAGGGATCCATAAAAGTTCTGCAGCTATGAGAGCTAAACTTATGTATTCAGTT TCACTTCAACAAGCTACAGGTTGTTGCTTTTTGGACCACCAAGAAATGAGATTAGGCCCATGGAAAATGCTTGAACATTA GGTGGACCTCCTACATTGGGATTTGAGGCCTAAGCTGCATCACGAAAAACATGGATAGGCAAGGGAGTAGAAGCAATAGT TGGCTGAATAACAAGTCCAGACAGGAGTGCATAGATCCTTTAAGATATCCCAAAATCCATTTAACAGATTGCCAATAGTC TTAACTCCAAGTGGTTCAGCCATGAATTGGGAGACTATATTTACAGGATAAGCGGTCTCAGGATGAGTTATAGTAGCATA TTGTAAGTCACCTACAATAGAGCAATAAATTGGTCGGGTCGTAATAAAATCAGAACCTATTTTTTGTTAATTTGCATCCA CCAGGTAGAGGAGTAGAGTTTCCTTTGCCTCATGCATATTGGGCTTTAGTAATGATCAATGATGTATTTAGACTGATTTA AAACAAGGGATCTATCGGGAAGTTTACTGACCTAAATGCCAAGAAAATGATCAAGCTCCCCCTAGCTGTTTGAGAGCAAA AATGTCATTGAACTGAGTGATGAGGCCTTGAATTAGAAAGTGTGAATTTCCTGTATAACTCTATTGTCAATGTACATGAG CACATCGAGGCAGTAGGTTTCACGCATGAGAATCAACAATGAAGGGTCAAATTTACTAGAAATGAAACCATGGCCAATTG TTGCCTTTGTTAGCCTTCATACTATGCCATTGGAGTCTGTTTTATCCCATATTAAGCTTGCACACTAGTTTGTTAGGAGA CTCAAAACCTAGAGGTTGATTCATATATACTTTTTATTAAGGAATTTTGACATTAATTTTTTGAAGAGGCCAGCCATTAG TAAGAGCAAGAGTGAGAACAATTCACACTCTGACAGGCTTTACCACTGGTGTGAATAATCAAATCCAACTTTTTGGTGAT ATCCTTTTGCTACAAGACTGGTCTTGTACTTGTTAATAGTTCAATCTGGGTTTTTCTTTACTCTAAATACCCATTTATAT GCTTTCCTCCAATGAGGCAATGTCAAGGCATGCTATATAGTGAAGTAGGATGTTGGTTCAAGATGAGTGAATAGTGAAGT AGGATGCAATTTGGGTTTTATGATACCTGATTTGATCTAGATTGCATGGATGTGTGAATTGAGAAGATGGGGCAAGAGAT TCTAAAGAAAGTCCAGATGTACTATTGTCATGAATGGGAAAAGTGCTGGACAGAGAATCGCATGATAAAGAAATTAGGCT GCTAGACATAGAACATTGCATATTGTATGAATTTGACTGTGG
CDS sequence (LotjaGi4g1v0190300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTGTGCTTGTAGGGGTTGCTGGGAGTGCCTTTTGAAGCTTTTGAACTTCTTATTGACCCTTGTTGGTCTGGCCAT GGTGGGCTATGGGATTTACCTGCTGGTTGAATTCAGTAAAGCTTCAGATAACACTCTCAGTGTTTCTACTGTCAGTGATG ATCAAACTCTAGTTCAACTTGGCCGCCCCATGCTTATGGCTGTGTCTCTGTCCAACAGTTTCTTTGATGATTTGCCCAAG GCCTGGTTTATTTACTTATTCATTGGAATAGGGGTAGTTCTCTTTGTCATTTCTTGTTTTGGTTGTATTGGAGCTATGAC GCGGAGTGGCTGCTGCCTGAGCTGTTTTGCTGTTTTAGTGGTATTGTTGATCTTGGCAGAGCTGGGATGTGCAGCCTTTA TATTTTTTGACAAAAGCTGGAAAAAGGAAATTCCGACAGACAAAACTGGAAATTTTGATATGATATATGAATTTCTCAGA GAGAACTGGAATATTGTGAGATGGGTCGCTCTTGGAATTGTTATATTTGAGGCTCTTCTTTTTGTGTTAGCCCTTATTGT TCGGGCTGCAAATAGGCCAGCTGACTATGACAGTGATGAAGAATTCATTAATCCTAGGCAGCAAGCCCGTCAGCCTTTGC TCAACAGACCAGCAGCTCCAGCATCAGGTGTACCAGTTGCGGGCACAATTGATCAGCGTCCAAGCAGAAATGATGCATGG AGTACAAGGATGAGGGAGAAGTATGGGTTAGATACATCAGAATTCACATACAACCCATCCGAGTCACAAAGGTTCCAGCA AGTGAACTCACAGCCAACTGAAGAAAGGAGCCGCTGCGCTATAATGTGA
Protein sequence (LotjaGi4g1v0190300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACACRGCWECLLKLLNFLLTLVGLAMVGYGIYLLVEFSKASDNTLSVSTVSDDQTLVQLGRPMLMAVSLSNSFFDDLPK AWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAVLVVLLILAELGCAAFIFFDKSWKKEIPTDKTGNFDMIYEFLR ENWNIVRWVALGIVIFEALLFVLALIVRAANRPADYDSDEEFINPRQQARQPLLNRPAAPASGVPVAGTIDQRPSRNDAW STRMREKYGLDTSEFTYNPSESQRFQQVNSQPTEERSRCAIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 282 | 279 | 4.7E-145 | – | |
| PANTHER | 4 | 282 | 279 | 4.7E-145 | – | |
| Pfam | 11 | 140 | 130 | 5.8E-13 | ||
| Phobius | 12 | 36 | 25 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 37 | 81 | 45 | - | – | |
| Phobius | 82 | 103 | 22 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 104 | 114 | 11 | - | – | |
| TMHMM | 113 | 135 | 23 | - | – | |
| Phobius | 115 | 136 | 22 | - | – | |
| Phobius | 137 | 164 | 28 | - | – | |
| TMHMM | 165 | 187 | 23 | - | – | |
| Phobius | 165 | 187 | 23 | - | – | |
| Phobius | 188 | 282 | 95 | - | – | |
| MobiDBLite | 216 | 236 | 21 | - | – | |
| MobiDBLite | 254 | 282 | 29 | - | – | |
| MobiDBLite | 254 | 276 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0190300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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