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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0190700 |
| Transcript ID | LotjaGi4g1v0190700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Purine permease; TAIR: AT4G18210.1 purine permease 10; Swiss-Prot: sp|O49725|PUP10_ARATH Probable purine permease 10; TrEMBL-Plants: tr|K7MLS8|K7MLS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0190700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:43678661..43679889) extracted from Lotus japonicus Gifu genome v1.2.
ATAATCATTTTCCAGGACTTCAGTATCCTTCTGAACTTTGAATTAGTTCAAGTTATATCAAATAGTGAAATAATCTCTTC AAATTTTTGTAATGTATTCTTTCAGATGACAGGAAAGTGCCCAACTCAGAGAAAAACACTATAGTCACTCAGCAACTTCA ACATCCAAGATTCTGGTGGTGGTTTCGTGTATCCCTCTATATAATCTTTCTTCTTGTAGGCCAATCTGCAGCCACTCTTT TGGGAAGGTTATACTATGACAAGGGTGGTAATAGCAAATGGATGGCAACATTTGTTCAATCAGCTGGATTTCCTGTACTA CTTCCACTCCTTTTTACTTTCCAAAAACATGCCAAATTAACTAACATACTCACCAATGACCCATCCAAAAGGACCAAAAC CAAACCAAAAGTTTTCATTCTAGTTTCTCTATATATAGCTTTTGGGTTGCTTTTGGCCGGGGACAACTTGATGTATTCCT ATGGACTTCTATATCTCCCTCTTTCCACATATTCTCTACTATGTGCTACCCAATTAGCCTTCAATGCAATATTCTCTTAT TTTCTAAATTCACAGAAGTTCACAGCGTTCATATTCAATTCAGTAGTCCTCCTTACCATATCAGCTTCCCTGCTTGCAAT CAATTCCAATTCTGATGACGACTCAACTGATCTTCCAAGAGAAAAGCATGTACTTGGGTTCTTCCTCACCCTTGGTGCAT CTGCCACATTTTCATTATACCTATCTCTCGTGCAGCTTTCTTTTGAGAAAGTTATAAAAAGTGAAACCTTTTCTGCTGTC TTGAACATGCAATTTTACCCTTCTTTCATTGCTACATGTGCTTGTGTTGTTGGGTTGTTTGCAAGTGGAGAATGGAAAAG TTTGGACAAGGAGATGAAGGGATATGAGAAGGGAAGAGTGTCATATATAATGACTCTGCTTTGGACTGCTGTGACATGGC AAATAGCTTCTATTGGCATGCTGGGGTTAGTTTTTGAGGTATCTTCATTGTTCTCAAATGTAATAGGTACTGTGGTATTG CCTGTAACTCCAATCCTTGCTGTAATATTCTTCCATGACAAGATCAATGGGGTGAAGCTTATGGCCTTGTTGTTAGCCGT GTGGGGCTTTCTTTCCTATATTTATCAACATTATATAGATGACAAGCAAGCTAAGTTAGATAAGAGTCATAGACTTGAGG TTTCAAAGGGTGAGGTAGAAATATGTTGA
CDS sequence (LotjaGi4g1v0190700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACATTTGTTCAATCAGCTGGATTTCCTGTACTACTTCCACTCCTTTTTACTTTCCAAAAACATGCCAAATTAAC TAACATACTCACCAATGACCCATCCAAAAGGACCAAAACCAAACCAAAAGTTTTCATTCTAGTTTCTCTATATATAGCTT TTGGGTTGCTTTTGGCCGGGGACAACTTGATGTATTCCTATGGACTTCTATATCTCCCTCTTTCCACATATTCTCTACTA TGTGCTACCCAATTAGCCTTCAATGCAATATTCTCTTATTTTCTAAATTCACAGAAGTTCACAGCGTTCATATTCAATTC AGTAGTCCTCCTTACCATATCAGCTTCCCTGCTTGCAATCAATTCCAATTCTGATGACGACTCAACTGATCTTCCAAGAG AAAAGCATGTACTTGGGTTCTTCCTCACCCTTGGTGCATCTGCCACATTTTCATTATACCTATCTCTCGTGCAGCTTTCT TTTGAGAAAGTTATAAAAAGTGAAACCTTTTCTGCTGTCTTGAACATGCAATTTTACCCTTCTTTCATTGCTACATGTGC TTGTGTTGTTGGGTTGTTTGCAAGTGGAGAATGGAAAAGTTTGGACAAGGAGATGAAGGGATATGAGAAGGGAAGAGTGT CATATATAATGACTCTGCTTTGGACTGCTGTGACATGGCAAATAGCTTCTATTGGCATGCTGGGGTTAGTTTTTGAGGTA TCTTCATTGTTCTCAAATGTAATAGGTACTGTGGTATTGCCTGTAACTCCAATCCTTGCTGTAATATTCTTCCATGACAA GATCAATGGGGTGAAGCTTATGGCCTTGTTGTTAGCCGTGTGGGGCTTTCTTTCCTATATTTATCAACATTATATAGATG ACAAGCAAGCTAAGTTAGATAAGAGTCATAGACTTGAGGTTTCAAAGGGTGAGGTAGAAATATGTTGA
Protein sequence (LotjaGi4g1v0190700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATFVQSAGFPVLLPLLFTFQKHAKLTNILTNDPSKRTKTKPKVFILVSLYIAFGLLLAGDNLMYSYGLLYLPLSTYSLL CATQLAFNAIFSYFLNSQKFTAFIFNSVVLLTISASLLAINSNSDDDSTDLPREKHVLGFFLTLGASATFSLYLSLVQLS FEKVIKSETFSAVLNMQFYPSFIATCACVVGLFASGEWKSLDKEMKGYEKGRVSYIMTLLWTAVTWQIASIGMLGLVFEV SSLFSNVIGTVVLPVTPILAVIFFHDKINGVKLMALLLAVWGFLSYIYQHYIDDKQAKLDKSHRLEVSKGEVEIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 310 | 310 | 6.2E-166 | ||
| Phobius | 1 | 43 | 43 | - | – | |
| PANTHER | 1 | 310 | 310 | 6.2E-166 | – | |
| Pfam | 1 | 295 | 295 | 5.6E-112 | – | |
| SUPERFAMILY | 44 | 123 | 80 | 6.28E-7 | – | |
| Phobius | 44 | 65 | 22 | - | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Phobius | 66 | 76 | 11 | - | – | |
| TMHMM | 76 | 95 | 20 | - | – | |
| Phobius | 77 | 95 | 19 | - | – | |
| Phobius | 96 | 101 | 6 | - | – | |
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 102 | 120 | 19 | - | – | |
| Phobius | 121 | 139 | 19 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 140 | 161 | 22 | - | – | |
| Phobius | 162 | 172 | 11 | - | – | |
| TMHMM | 172 | 194 | 23 | - | – | |
| Phobius | 173 | 194 | 22 | - | – | |
| Phobius | 195 | 213 | 19 | - | – | |
| TMHMM | 214 | 236 | 23 | - | – | |
| Phobius | 214 | 236 | 23 | - | – | |
| Phobius | 237 | 242 | 6 | - | – | |
| TMHMM | 243 | 265 | 23 | - | – | |
| Phobius | 243 | 264 | 22 | - | – | |
| Phobius | 265 | 269 | 5 | - | – | |
| TMHMM | 270 | 292 | 23 | - | – | |
| Phobius | 270 | 288 | 19 | - | – | |
| Phobius | 289 | 315 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Purine nucleoside transmembrane transporter activity | Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0190700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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