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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0194200 |
| Transcript ID | LotjaGi4g1v0194200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin B-like protein; TAIR: AT4G17615.1 calcineurin B-like protein 1; Swiss-Prot: sp|O81445|CNBL1_ARATH Calcineurin B-like protein 1; TrEMBL-Plants: tr|I3SVY0|I3SVY0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0194200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:44687927..44694507) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAATACTAGTCCTTGCCTCCGCCGCCCGCCACACCAACCTCGCCGTTAACGTTTCCTACTTTACTTTCCCTTGGG AGATTTTCACATTCACTTTTCCACAACCACATCGTCAATCTCTCTCTCCCACTAGAACTAGAATCTTTTATCTTTTATTT TATATAAAACCAAACCCGAACTCAACAAACTACACAATCACATCACTTTTTCGATTCTCTCTCAATAACTCCGCGTCTCT CTCTCTCTTCATCCTCCTTCTACTTCTTCTTCCTCGCTTGCTTTCCATCGCCCTCTACTCACTCCAATGGCAACTTTCTA GAAACCCACACCTTTCATCTGGGTGAGTTTCTTTCATTCCTAGCCCTGCTTCTTGCTTCGGATTTTGGATTCTACTCATG TCTTTGATTTTTCCACTTTCCTTTTTCTGTGTTTGATTCAGATGTTGTTTGATTTGGGTAGGGTTTATGGGAGAGGGAAA TTTGATAACAATGTAGGCTTAATTTATCTATTTCTTTTTGCTGATTCGTTGTTTGTGTGCTTTGATTGGGATCTCCATAG GATTCTCTGATATTGACTGTTTGAAGATTACTTCATCTTCGTGATGGGTTGAAAAATCTGAATCCTGGGTCATGTTTTTA TGTTTTTTTAATTATTGAGCATGTTTATTATTTGTCCCATTACCATCTCATGCACCAATTTGTCTGGAAAAGTCAAACTC AATAATTACATAAACTATGTTTTTTTCTGGCTTGAGCTCTATTGCCATCTTTTATTGATTGATGGTCATTGGTCAATTAT TGTTTTCTAACATAGTGTTGGAAATCTCCATACTCCAGCCTTTATTTTAATTTTTTGTTTGAAATTTTAAAGTTTTTATT TGTGCCCTGTCAATTTTGTACCACTAAAATCATGTAGGGTTGATTTATTTGTTTATTATTATATGTTTTGTCTTTTAAAT TTTTTTGGGTTTGAATTATAAGGATAATGTTATTTTGATGATATATATTCAGGGAAACTCGAGCACAGGTCCTGCACCGT GCTACCCTTGCATTTCCTCCATAAATGGGCTGTTTCAACTCTAAGGCAAGAAAGCAGTTTCCAGGGCAAGAGGATCCAGT AATTCTTGCATCACAGACAGCTTGTAAGTTGATTAATTTTGTCAATGAAATGATATGAAGCTGTAATTCTTGTACAATAA TAATACTGGTTTATTGTGATGTTCTTTTTTTGTTGTTGAATTCTGACTGTAAAAGCTTCTGAGGAGTAGCTTATTGTGAA TTTGCTTCTAGTGTTGCACTCTTGCAGTCTGAATCTTAAAGTATAATATTTGTTAAACAAAGTTATATTGTTTTGTAAGG GCCTGCAATTATGTACATGTTTCTTGGGATTTGTGCATTCACGCGCATTTCAAGCCGTCCGATCATATGATCTGATGAAA ATCATTCCGATTTACAATTCTAACTCATTAACTTAAAATGTGTATGTCCTACCAAGATCTGATAGCTAAAAATACTTGCT TGCGTCGTATTTCCTCGACTGCGGGGAATCTTAATCCATTTATACCTGTAGGGTTTATGGAAAGGGAAGTTTTGCGAGTT TGCAACAAGCAAAACACAGTTCACTTCGTATGTATGCTATTAAAAGTAGGCAAAGGTGGATCTATCCAAAGTAGGCACTT CCTCTTGGGCCTACCCTTAATCTACCTTATTTTGGTCTACATGGATGAAACTGATTTCACCATGCTTTATCAACATAGGC TGTGCTATATCTTTGGGTATCTGGATGTTAGGTTATATTATAAATTGCATTGCTTCTGCTTATTGTGAAGTAAACCTAAC CAAAGATAATATTGCTTCCAGTCTATTCCATTCTGTCACCAAAGCAAAAAATGGCTCTTTTTCTCGCTCATACTGCAAAA CTTTTCTCTTTTCTGGCACACAATTTCATACCCATGCATTCAGCAAGCTCTACTAATTTAAGAAACAACTCATATGTGTT GGCATCTCAATGGAAATGGATAGAGGATTATTGTGTTTGTGTCTCAGTACTGGTTAATTATTAAGAAAAATGTTTCCATA TAGCGATGCATCATGCTTTTGTTATTCAGCAAGCTCTGCTGATTTGAGAAACAAAATCAAGTTTGTATGTGTAAGTGTCT CAAATGAAAATGGATAGGATGATCGTGTTTGGGTCTCGTTACTGGTAAAATATTAAGTAAAATGTTTCTAAATAGCTATG CATAATGCATAATGCTTTTGTTATTGTATTACTCTATGTGTTTAACCTTGTGATAATTTTTTGGTTTCAGTCACTGTCAG TGAGGTCGAAGCATTATTCGAGCTTTTTAAGAGCATAAGCAGCTCTGTTGTTGATGATGGATTAATAAGCAAGGTACTAC ATCACAAATTCTTTTTGTTTTTCTGTTTTTCAGAAGTTGGTCTCTGATAAATTCTGCTTTTACATGTTGCTGTCTCTTCA CTCATTCCTTTTAAGTATCTTCGCCCTATCTTTAGTTTTTCACATGTATCTTGTGCCATGTGAAATTATGCTATTAGCTT TACCTGTGTATTTTTGTCTCAAGAATTTAGCCCATAACTACGGTGTGCAATGCATTTATTTGGAATATTCCAGATAATCC ATTGTGAAATACAAAACATAATTGTTTTTAATATTTTCAACATTGCTTCCATACATGAGTGATCTGCATTAAATGATATC TTTTTTCTCACTTTTTTATATTTATTTTTCTTATTGCTCTGTTATATACTTGTTCATAAATTATTCTCTGTCCTAATCCA GTTAACCTTTTTGTTTTTTATGGTTATTTGTTCTTCACACGGAACTCGTAGCCCATAATGTGGTTATGTGCATTCTTGCT TTGCAGGAAGAATTTCAGTTGGCAATCTTCAAGAATAGGAAAAAAGAAAATATCTTCGCAAATCGGGTATTAAACACCAT ACCTTTTCTTTCGTAGTGATAATTATTGTGCCGTAATTGTTTGCTTCTTGCAAGTATGTTTGAATGTCTTTAAGCGTCTC AATGTGCTTTTAGATCAGCAATTTGCAATTTGCAATTCAAGTAGGTTATTGAATAAATTCACTGTTTCACTCTATTTTTC TAGAAGAAACTCAATTTATTATTCTCCTAACATAAGTCTGTAGCATACTTATTGTGAACACAGGATATACTTCTGATTGA AATAGTTTTTCCAATTCCTACAAATTTTGACTTTTTGGACCTTGATCAAATTGGATCCTTTTGATTTCTCTATCAAAAGT ATACTTAAATTTCTTCTTCACTAATCTTAGATACTTGCCCCTAAAAATGAATCATCTCGAGCTCCATCATGTACCCCCAA ATAATGGGCTCTAGTGGAATAGAAGAAACGATGTCAAACCAAGAGCACCCTGATTTCTATATACTGCTAGAAAAAAATGG AGGATGTTAGAATCTGCAGCTAATCGGATCATGACTTTCAAGTACTATGTACTGCTTACATTTTGCCATACCATTCTTTA AATTTTGACCCGATATGTAATTGATTCATTAAATGGGTCCATTACTCTGACAAAATGTATATGCACATTATTATTCTTAT TTCCTGGTTTCCTTTTGAAATAGAAAGAAATCAACATTTGATTACCTTTGCAACTTTCATATTAATTTATTTCTCTACAT TCATTCTTGTGGTGTCTCCTTGAAGTAACCATTATTAATTGATTGGATATCTATTGATATGATTTCAGAATTTTTTTACA TGCAGATCTTTGATCTATTTGATGTCAAGAAGAAGGGAGTTATTGATTTTGATGACTTTGTTAGATCTCTCAATGTCTTC CACCCAAATGCAGCGCTAGAAGACAAGATAGATTGTAAGTTAAAAAATCCTTGACTCATTGTGGTTTACCTTTGATTCCT TTCTGCGATCTGGCTGTACTGATCCATTAGGTTTGGGATTTTCCTGCAGTTTCATTTAGGCTCTATGATTTGGACAGTAC TGGCTTTATTGAACGCCAAGAGGTAAGGCGGTCATTATTTGTTCATATACTTTCAAGGAAAATAAAGTGTTCTGTTTGAC GAAACAAATGAAGTTCAAATCTACATTCTTATGTCTTTTGTTCAAATTGATGATTTTCATTTTGGTTTTGTTTTTCTCAT TGTTCTTCAGAAAAAAGATATTTTATTTTGGTGTGCCGTTCATATCTTTTTGGTGATTTCTGACAGGTCAAGCAAATGTT AATTGCACTTCTTTGTGAGTCAGAAATGAAGTTGGCAGATGAGGTGGTAGAAACAATTATTGACAAGGTGAGTATTCCTG GATAATGTAGTATATTAGATATGAAAGTTCGGAGGAATTTACGGTGCACAATTGATTGTTTGTGTAAGGTTACACAAGCT ACTTTTAACCTGCAATAGCAGGTTTTTCCGGTTTTTTTTAAAAAATAAAAATTACAGATTTATTAATTATAACAATTAAC CTGTGATAATTTTACTTAAGTTAAATAGATCTATTAAATCATTCATCTTCATCTCTCTTTCTTCCCCAACCCTTCCCCTC AATCTACCAAAATCCACCTCCACCAACCTTCGACCAGAACCCACCCCATCAACCAATATCCATGCCACCACCACCACCAC CAACCCAGAACCCACCACCTATTTCCATGCCATCATGCCGGAATCCTTCTGCCGTCGCGTTGTCGCACCCAATCCTTCCC TCTTCGTTCCCTCAACTCCACCTACGTTTTCCTCTCCCAACCCAGATCTCCTTCCCAAAAACCACCACGAGCTGATCCGA CGGCAAGCTGATCTTGAGGAAAACTGCCAGATCTATCTTTAGTGTGGTCGCTTGGACGCGGAGGAGGATGAATCGTTGAT CTAGAGAACCAGAAACCAGTGAAGATAAAAACCCAGATCTGTGTTTGAATCCCTGAAACCAGATTTTTAAGAAAACAAAA AAAAAAACCCCAGATTTTAGTGGGCTTTGCCGGTGCGCCAACGTGCTTCATCAGAGCGGGCTTCGAGGTGAGAAAGTTCG GGATTTGCAAATGGGTTGAGAAATGATCGAATACATCAGAAAAAGGCACGATTGAATTCAAGAAGAATGTGTATCCTTCC CTACAAAAACATGCAAACACAAGATGAATGTCGGTTTAAGATTTGACTTCCATTTCTTGATTTTGGCCTTGAACTTTCAG ATCCCATTGATTGTCCTTTGGTTTAATGAATATGATATATGCATGCTATGTTGATGGAAATGCAATTATGTATAATGGAT TCAAAAAAAAATTCATGGTTTTTAATTTAGTGATTAGGGAGAGAGAAGAGAAACAGATTAATTAAGAATATTTTTTTAAA AAAAATTAATTAACAATAAATTTTTAATTAAGAAAATATGTTTTTTGATTATTTTTTTTAAAACCTACTATAGTGGGTCA AAATGCCAATGTGCAATCATACACAAGTTTTTACTTGTGCATGTTAAATTTTTCCTGAAAGTTCATCTACAATATGAAGA AAAATTGTGTTTTTTTAGTTGATGGTGTGTTGTGACCTCTTTTTTGTTTCTTTAATTAATTACCACAAATTAAATAGAAA GGTTTGAACTTGACATCATATTTTTTGTGGTCAGACATTCGTGGACGCTGACCAGAACCAAGATGGCAAAATTGACATTG ACGAGTGGCGAAAGTTTGTTTCTGAAAATCCATCACTGCTGAAAATCATGACTCTTCCCTACTTAAGGTTTGTGTAGAAT TATTTTTACGGTAAATGTGAATCTACTTTCATCCACATTTTGATGTTCAAACTATAATATAATTCGTTATTCTTGATACT AATGCAGGGACATCACAACTTCTTTCCCAAGTTTTGTATTTAATTCTAACGTGGATGAAATTGTTGCTTGAGAGCACACA ACTCTCAGTTATGCAATTATTGAGAGAATTGGATGTGTTTGTAAGAGCTTAATCAGAGTCTTAATTAGCTCTGCTCACGC TCAGTTAGTTGTAAATCACATTATCATTGAAATTTTCCAGTCGGGGTTAGTTAGGGCTTTGATTTTTTTTCTTTTAAATT AGTATTTTTTTAAATATTTGAAATCATTAATGAAGTACATATAATTGATATGTTCATGGTATGTTTGGATTTCAGTTAAT GTTCCTTTTGCATTCTTTGGAAAGTCATTATGTTTTTCGAGGTATCCAAAATGAAACGAGGTCAAATATTTTGTTACCAT GAAAGTTGGTTGAAGTTCAAACTGAATTAATAATCTATAAACAAATGTGTGTATGACGAGCATGATGCTAAATGAGTAAT GCCTTCAAAAACACTACGCTCAAATTAGTTGTGATATAAATTGAAAGTGCGTGTACCATATAAAGTAAGTTACCTATGAA TTTCCTTTGTCGTGAGGGACGTTGGACATGTAATCATGTGTTAACCTCCAATTCCACTTTAAAAAAAAATGTGTTAACCT CCAATTGGCATTAGGCAATAAAACCTTAGAGCATCTCCAATGCAAGGTGTTTCTAATTTTTGAGTCAATAAATAAAAACT GAGTTCTTAACTATTAGAGGG
CDS sequence (LotjaGi4g1v0194200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTGTTTCAACTCTAAGGCAAGAAAGCAGTTTCCAGGGCAAGAGGATCCAGTAATTCTTGCATCACAGACAGCTTT CACTGTCAGTGAGGTCGAAGCATTATTCGAGCTTTTTAAGAGCATAAGCAGCTCTGTTGTTGATGATGGATTAATAAGCA AGGAAGAATTTCAGTTGGCAATCTTCAAGAATAGGAAAAAAGAAAATATCTTCGCAAATCGGATCTTTGATCTATTTGAT GTCAAGAAGAAGGGAGTTATTGATTTTGATGACTTTGTTAGATCTCTCAATGTCTTCCACCCAAATGCAGCGCTAGAAGA CAAGATAGATTTTTCATTTAGGCTCTATGATTTGGACAGTACTGGCTTTATTGAACGCCAAGAGGTCAAGCAAATGTTAA TTGCACTTCTTTGTGAGTCAGAAATGAAGTTGGCAGATGAGGTGGTAGAAACAATTATTGACAAGACATTCGTGGACGCT GACCAGAACCAAGATGGCAAAATTGACATTGACGAGTGGCGAAAGTTTGTTTCTGAAAATCCATCACTGCTGAAAATCAT GACTCTTCCCTACTTAAGGGACATCACAACTTCTTTCCCAAGTTTTGTATTTAATTCTAACGTGGATGAAATTGTTGCTT GA
Protein sequence (LotjaGi4g1v0194200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCFNSKARKQFPGQEDPVILASQTAFTVSEVEALFELFKSISSSVVDDGLISKEEFQLAIFKNRKKENIFANRIFDLFD VKKKGVIDFDDFVRSLNVFHPNAALEDKIDFSFRLYDLDSTGFIERQEVKQMLIALLCESEMKLADEVVETIIDKTFVDA DQNQDGKIDIDEWRKFVSENPSLLKIMTLPYLRDITTSFPSFVFNSNVDEIVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 212 | 212 | 1.0E-123 | – | |
| PANTHER | 1 | 212 | 212 | 1.0E-123 | – | |
| Gene3D | 17 | 211 | 195 | 1.9E-62 | – | |
| SUPERFAMILY | 21 | 202 | 182 | 1.06E-42 | ||
| ProSiteProfiles | 67 | 102 | 36 | 11.166 | ||
| SMART | 71 | 99 | 29 | 21.0 | ||
| PRINTS | 75 | 96 | 22 | 1.9E-7 | – | |
| ProSiteProfiles | 104 | 139 | 36 | 12.756 | ||
| Pfam | 107 | 177 | 71 | 9.3E-9 | ||
| SMART | 108 | 136 | 29 | 0.012 | ||
| CDD | 108 | 178 | 71 | 6.82512E-11 | ||
| ProSitePatterns | 117 | 129 | 13 | - | ||
| PRINTS | 122 | 140 | 19 | 1.9E-7 | – | |
| ProSiteProfiles | 148 | 183 | 36 | 11.389 | ||
| SMART | 152 | 180 | 29 | 0.028 | ||
| ProSitePatterns | 161 | 173 | 13 | - | ||
| PRINTS | 168 | 188 | 21 | 1.9E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi4g1v0194200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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