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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0194800 |
| Transcript ID | LotjaGi4g1v0194800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase; TAIR: AT4G28780.1 GDSL-like Lipase/Acylhydrolase superfamily protein; Swiss-Prot: sp|Q9SVU5|GDL67_ARATH GDSL esterase/lipase At4g28780; TrEMBL-Plants: tr|V7CX22|V7CX22_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0194800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:44831394..44834189) extracted from Lotus japonicus Gifu genome v1.2.
ATTGAAATGTCTTTATTTATTTATTTCAATTCTAAAAGAAATTATATAATGTAAAAAATATTTTAAATAAACACGTCGCT AATATATAAGACCATTGAAAGTCTGTCCTAGATTTCAGAAACACTAACAAAATTGAGGTGATGATGTCCAGTATGATCAG AGTCCTCCTAGTGGTGGTGGTGGCCACCATGGCGGTGGTTGCTCCTCCAAAAGCAACAGAGGCAGCAGCTCGTGCTTTCT TTGTGTTTGGAGACTCATTGGTTGATAGTGGCAACAACAATTACTTGGCAACTCCGGCACGTGCTGACGCTGCCCCTTAT GGCATTGACTTTCCCTCTCATCTCCCCACTGGACGCTTCTCCAATGGCTTGAATTTTCCTGACATTATCTGTAAGTACTT CACTCACACCATACATATATAATGGACATATTCACATGTTCAAGTCATATTCATACTTAACTTGTGATGACTCTGAAAAT TAATTGAAAACCCCATGTTTATCTTATGATCCATGTTGCATTTGTTTCTTTATTGAGTGTTTGTTACATTACAATTACAT GTGGTGCTGACACAAACCATTTGAAATATTATCAATGTCTCTCTATATGACCAACTGATCTAAAGTGTGTTTCTTTCTTG TTCTAAAAAAAGTTGTCTTTCAGTACAAGATAGATGAGTGTGCTCCCATTGTTCACGCTTCATGTATTTTCACCCAATAG TTTCGATTTTTGTGATAGTTGGTTCATGATGGGTGACACGTGATGACGATGATATTGATTCATGTGGAATGTGAATGTTA TTGTAGGCCAGAAAATTGGGTCTGAACCCCCATTGCCATACCTGAGCCCTGAATTTCAAGGACAAAACCTCTTGCTTGGT GCCAACTTTGCTTCTGCAGGGATTGGAATCCTCAATGACACTGGAATCCAATTTGTAAGTCTCTGCTAAATATAACATTA TATTAGTCTTTTTAGTCCTTGCCAATGCTATAATTCTTTTACCTATTCTTGGAATTAGGCTGAAAGGCTGTAGTGATGAA CTTACTTGACATAAACAATGTTGTGTTATTACAAACAGGTGGACATCATCAGAATGTTCCAGCAATTTTCATATTTTGAG GAGTACCAGCAAAGGTTAAGTGCACTTGTTGGGGCTGACGAAGCTCAGAACATTGTGAATGGAGCTCTTTACCTCATGAC ACTTGGTGGTAACGACTTTGTTAACAACTATTTCTTTCTTCCTGTCACTCCAAGGTCTCACGAGTTCACAGTCCCTCAGT TCTCTCAACTCCTTATCTCTGAGTACCAAAATATTCTCATGGTGATTAATCTTTATCTTTGTTAATTTGTTACTAATTTG TATTTTCTCTATGGCTTGGATGTCTGTCACAGAGTTGGTGGTTGAAACATGGCATTCACTTCTCAAATACTTGATGTCTA TGGACATATATATGCACACCACATGTGTATTGCATCATGAAAATTTAAGTTTTGAATTTATATAGCTGGCCCCATTGAAT CTAGGACAATACCACTGAGGTTGAATTGAAAGGAATTCATTCATGTAACATCTTTAAGGTAAAAGCAACCCAAAATTCTT TAGATGGTTAATTAAACCGTCATTATCAGGCTTGAGTACATTTAGATGGTAAATTAAGTCATTACATTCTTTGATTGATC AATTAAGAGTTGAGATTTGAAAAAACTGAATACTTTATTATACATGTGCAAGTATATAATCACAATCTCAACGGTTAATA CAGAGGTTGTACGAGTTGGGGGCTCGTCGAGTACTGGTGACAGGAACCGGTCCATTAGGTTGCATTCCGTCTCAGCTTGC CGCGAGAAGTAGTGACGGTGAGTGTGTGCCAGAGATACAGGAAGCTGCAGATATTTTCACCTCTATGTTGATCCAAATGA CCAGAGATCTCAACTCTCAATTAGGCTCTGACATTTTTATTGCTGTCAATACCAACACAGTGCATGCAGAATTCGTCACC AATCCTCAAGCATATGGTCTGTTCTATTCAACATTATTCTTCTCTTCTTATTTTCTGGATGTCCTTTTCTTCTTTTTCTT CTTCATCAGTTTCTCTTCAAAATTAATTTTAATTTCATAATCACATGAAGAAAGGTTTTCAAACATACACTACTATGTGC ACGTTCGTAACACCTTCTACAATTAACAATTTTAAAATTGATTTTGGAGTCAAAATTAATTATGATGTAAAACTCATGTG AGTATCTTTGACTTCTGACCGAAAAAACCAATTATGAGAAATATGAGCCAATTTAATTGTTTCAATTCTAAGTCAAAGTC AATTCTGATGCAGGTTTTGAAACCTCAAAGATTGCATGTTGTGGTCAAGGTCCATACAATGGGCTAGGACCGTGCACCCC CTTGTCACATGTTTGCCCTGACCGGGATGTCTATGCATTTTGGGATGCTTTCCATCCGAGCCAGCGTGCTTTGGAGTTCA TTGCTGAGGGAGTGTTTAATGGATCTAGTGACATTATCAGCCCCATGAACCTCAGCACCATCATGGCCTTGGACTCCAAG ATCTAGTTTGATTAACAGAAAGCAACAAGACTAATAATTGATTATGTGAGGGGGTTTTGGCTGAAAACAAACTAGAGGAT GGCGACTATATAGTGAGGGGTATTTTTTTTTGAAACAGAGTATTTTTTACTATGCCTATAAGATAAATGGTGTAGGTTAA GGATGTGTTTGAATAAATAAATACTAGTGCTTTTTTACCCGCGCGTTGCACGGGGAATATGTCTATTATATTTGGT
CDS sequence (LotjaGi4g1v0194800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCCAGTATGATCAGAGTCCTCCTAGTGGTGGTGGTGGCCACCATGGCGGTGGTTGCTCCTCCAAAAGCAACAGA GGCAGCAGCTCGTGCTTTCTTTGTGTTTGGAGACTCATTGGTTGATAGTGGCAACAACAATTACTTGGCAACTCCGGCAC GTGCTGACGCTGCCCCTTATGGCATTGACTTTCCCTCTCATCTCCCCACTGGACGCTTCTCCAATGGCTTGAATTTTCCT GACATTATCTGCCAGAAAATTGGGTCTGAACCCCCATTGCCATACCTGAGCCCTGAATTTCAAGGACAAAACCTCTTGCT TGGTGCCAACTTTGCTTCTGCAGGGATTGGAATCCTCAATGACACTGGAATCCAATTTGTGGACATCATCAGAATGTTCC AGCAATTTTCATATTTTGAGGAGTACCAGCAAAGGTTAAGTGCACTTGTTGGGGCTGACGAAGCTCAGAACATTGTGAAT GGAGCTCTTTACCTCATGACACTTGGTGGTAACGACTTTGTTAACAACTATTTCTTTCTTCCTGTCACTCCAAGGTCTCA CGAGTTCACAGTCCCTCAGTTCTCTCAACTCCTTATCTCTGAGTACCAAAATATTCTCATGAGGTTGTACGAGTTGGGGG CTCGTCGAGTACTGGTGACAGGAACCGGTCCATTAGGTTGCATTCCGTCTCAGCTTGCCGCGAGAAGTAGTGACGGTGAG TGTGTGCCAGAGATACAGGAAGCTGCAGATATTTTCACCTCTATGTTGATCCAAATGACCAGAGATCTCAACTCTCAATT AGGCTCTGACATTTTTATTGCTGTCAATACCAACACAGTGCATGCAGAATTCGTCACCAATCCTCAAGCATATGGTTTTG AAACCTCAAAGATTGCATGTTGTGGTCAAGGTCCATACAATGGGCTAGGACCGTGCACCCCCTTGTCACATGTTTGCCCT GACCGGGATGTCTATGCATTTTGGGATGCTTTCCATCCGAGCCAGCGTGCTTTGGAGTTCATTGCTGAGGGAGTGTTTAA TGGATCTAGTGACATTATCAGCCCCATGAACCTCAGCACCATCATGGCCTTGGACTCCAAGATCTAG
Protein sequence (LotjaGi4g1v0194800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSSMIRVLLVVVVATMAVVAPPKATEAAARAFFVFGDSLVDSGNNNYLATPARADAAPYGIDFPSHLPTGRFSNGLNFP DIICQKIGSEPPLPYLSPEFQGQNLLLGANFASAGIGILNDTGIQFVDIIRMFQQFSYFEEYQQRLSALVGADEAQNIVN GALYLMTLGGNDFVNNYFFLPVTPRSHEFTVPQFSQLLISEYQNILMRLYELGARRVLVTGTGPLGCIPSQLAARSSDGE CVPEIQEAADIFTSMLIQMTRDLNSQLGSDIFIAVNTNTVHAEFVTNPQAYGFETSKIACCGQGPYNGLGPCTPLSHVCP DRDVYAFWDAFHPSQRALEFIAEGVFNGSSDIISPMNLSTIMALDSKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| PANTHER | 5 | 365 | 361 | 6.2E-192 | – | |
| PANTHER | 5 | 365 | 361 | 6.2E-192 | – | |
| Phobius | 8 | 20 | 13 | - | – | |
| Phobius | 21 | 28 | 8 | - | – | |
| Gene3D | 23 | 350 | 328 | 4.3E-42 | ||
| Phobius | 29 | 368 | 340 | - | – | |
| CDD | 32 | 349 | 318 | 1.175E-125 | ||
| SUPERFAMILY | 33 | 347 | 315 | 1.65E-5 | – | |
| Pfam | 34 | 343 | 310 | 4.5E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi4g1v0194800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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