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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0199900 |
| Transcript ID | LotjaGi4g1v0199900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PPPDE thiol peptidase family protein, putative; TAIR: AT4G17486.1 PPPDE putative thiol peptidase family protein; Swiss-Prot: sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486; TrEMBL-Plants: tr|I3S5Z1|I3S5Z1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0199900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:46277048..46283059) extracted from Lotus japonicus Gifu genome v1.2.
GGGGTGCCAAATCCAGAGCTCTAAGTTTCTTCCTATCCCTTTCTCTATTCCTGTTGCTTCTTCAACCCTCATACGATCCA CCTTTTATATTCATTGTAAACCCCCCAATTTCTATTCGATTCACTTGATTCAACTCTTTCCACCAGAGATTTTAAGGGTC ATTTCATCACACAAACTTTGAACCTCACCTGCATTTTTTCTCAGTAAACCCCATTTTTGATAAACGCAGCATGGTTTCAA TTAAGCTTCTTTTTTGTTTTTTGATTTTTTTAAACCAACCCCAGATGAAAAGTTTGAATTTTTTCCCATCCCTTTTGATG TATCATGTGTGTTTGTAAATGGGTATTTTATTTTTGCGGAAAAAAATTGATTTTTATTTTTTGGATGATTTTGTAGGCTT CTCTTTGCGGCGAGAAGAAGATGGGGTGGTGAGGCTGGGAATGCAATTGGAGAATTGGGGAGAAGAGAGGGAGCAAATCA TACACGATGCCGTCGTTGCCCTCAAGCTCGGGATCGGAAAATGTAGAGGATAGCAATAAAAAGAATAGTTCTATGGTGTA TCTCAATGTGTATGATCTTACGCCTGCCAACAATTATCTTTACGTATTCGGGGTTGGAATCTTTCATTCGGGTATAGAAG GTGTGTCTGCGTGATCCTTGTACCTCATTTGCTGTCTAGTTTTAATTCTGTTGCTTGTTGTGATTACAAGAGAATTAAAT TTTGTACTTGTCATAGAAATTGCAAATGACCTTATGGTGAAATATTTGATCATTGAAAAGAAGAGGAAAAAAGGAAATTG AAAGACTAAGTTTTGTAATTTATATGAAGTTGAAGAGAGGCATGAGAATAGATTACCAGGCAGTAGGTCATCATTCCACT CATCTATTGAGGTTTTGTTGAATATTTTTACCGGAGGGTTTTTATTTATGATATGCCTTTAGAGAATACTGCATGTGCAT GATGGTGAACCTAGGAAGTAATGCTCAAAATGATCGGGATAAGGTCTCCGCTTTTAATATATTTCTGTCTTTGGTTGGAA CTTCATTTCCATGATAACCCTTTATAACAAACATGATTGAAGCCCTCAATCCCGGATAGCAGTGCGTAGCAGCCGTCCCA AAAAGCAATAGTGGTTAAGCGGTAGTGCAAAGCGGAATGGCCGCTATGCTGAATCTGTTGTAGCGTTTATATAATTTAAA CTATATACATCTATAAATGCTAAAAATGATAAAAGAAAAATACTCAAAAGTCGAAAGTCATAACATTCATAATTAAAAGT TGTAGTTGTCCTAAACGAAACATAGTAAATACCAATAAAAGTCATTGCAACCAAGCAGTTTAAGTGTTTAAGGCTTAAAC TAAACTATCTAAAAAACATGAAAATTCAAAATAAGTTTCCTATATAGGAATTATCAATCATCCTCTTGTAAATCCAAGTC TTCATCTTTATCTCTTTCATTAGTATCACAATTGTAGTTCTCTTCCTTCTCATCCTCTTCAAACCAGACCCTTTTCAGTA TGTTCCCTAAACAAAAGCCCTGAACTGAAATATTCCCCCCAAAGTGCCCTAGAATTAAAATTTTGAGGGCATTTTGGGTT TTTGTCAGTTTCACTGATTAGCGGCAAAATAGTGCCGTGATGGCCGATATTTCCCCTGCTTTAGATGCAGTGATGGCCTC TACATTAAACTGCAATGCTATGTGGCAACCAGGAGCAGCCAGGGGTCACTGCACATTGCTTCGACACTATAATGCCCGCT AGAGCGCGCTATTGACCACCCTAATTGAATCTCACTATCAAATATGGAAGTGCAGTAAATTATGGTGGTAAACCTGGTAA GATCTGCTGATACTTACTTATAACTAAGGAATTTCTAGTTATCTTGAAGATACTCATTTTGTAATTTGCTTAATTATTTA CATATGGTTATGTGGTAATTTAAGATATATTTTTCTATTATTTTCAAGCTCTGGTTTAATTATTTAGGCATTTAATATGG TTTAGTATTATTCTAATGTACCTAAGGTTTGATTTTTATTCCTAAATAATCTTGTATATATTTGGATTACCTATACAAGG GAGCAGTTGTTTTGCTCCTTTTCTTCAACGACGTATTTATTTATTTTTCCTTTGGCTTCATATTCTCTCCCTCTGAGCTC TGTTTTTGCTCTCTTCTATCTTCTTACCTTTTTGCCTTCTTCTATTCTATTGATGTTCGTGAAAAGAATCCTTATAGTAC CCTCTGATGTGCTAGTTATTATGATTAATTATGTTCCTGATGCAGTTCAATGCTGATTTTATGATTCAAAGGGTGACTTG GCAGTTATTTTGACAATGGAATGCAAGCATTTCATTGAGCATTAATGTGACCATTATGGGTATATGTTTGTTTCATGCTA AAGGCTTGACGCACCCGCACACACATGGTTACATTTTTCTGCCTTCTAATGAAACTTATTGTCTAGCCAAAAGAGCTTTA AGTTTTGTCATTAAAGAGTTGTGGTTTCTCTACTTCATGGCTTCTTCTCTCTCTTGAGTGTTGAGACTGAGGTTTAGCTT ATGGCCCCTCAAGGATGCTCTATGCTTCTAGATAAGGCTGTGATTTAAGGTGGGGGACACCTCATGAAGAAATAACATCA TTGCATACTATAGCTGGATACAACAGTCTTTTAGATATATAAAGACACTGCTAAGGTGTTTTGAGAAAGTTAAGGACTGA TCATATATTCATATATATATAATATCTTTTTATGGCCATTTAGACTTTGGCAAGACTCGCCTCAAGAGCAAGCTTTTGGG GTTGAGTTTGGCCTAGTCTAAATTCAAGATGGTATTAGAGCCTATCTTAGATCTAATATTGGGCCATCAACCGATGTCCA AAAATCGACCCGGGTCTACGGATTTCTCAGTGCAATCTGTCTGGCCTACGACTTTCCCATTGAAATCAACCTAGTCTCGT GGATTTCTAGTGCAATAAAAAATCCTTTATAATCCCGATGCTTCATATGTCCAATTCTGAGCATGGGGGGGTATGTTAGA ATCCCACATAGAAGTTAGTCAAATAATCTCCACACTCCAAAATCCAAATGCCTAAACTGGCGAGTGTGTTGAGATCTCAC AATGACTAGAGATATGGCCAAGGTAGAGCTTATAAAGGTTTTGGCAATTCTAACCACATTAGCTAACTTTTGGGTTGATT TAGGCCTAGCCTGAACTCAAGTATATTTGTTGTCCTAACTTTTGGGTTGAGTTAGGCCTAGCCTGAACTCACACATTTGC TACTTTGAGTCATTACCCCCTTTGCTTTAATTTCTCATCTTTGGTTCCCACACTTCCAAGGATTTAATTTTCGATCTTAA TATGCAAAAAAAATAAAAAATTATTACAAGGATTTCATTTCTTCTATCAAGGACTGAGATTCTGGAATTTAAATCATTGA GCATGGTCGAGTTTTGCATTTCTGTGGGCTTGCGTCTTGCATCATCAAGTCCTGGATGGTTGGCTTAATTTTTAGGGGTT GTAAATAACAATAGCTCATACAAAACTAGTTTAGGGTTTCCATTTGTCTTAGTATTTTCTATACACTGTTATTTTTCTGA TTATTTCTTAACGGATTTGATTTTGATTCATTTATTGTGTATTAGTCATTCATGTATCATGAACCCTTTTCTTTTTCTTG TTGCTGTCTTTTTCTAGTGGACCATCTTATTTTGTCATTCCAAAACATGACCATTTTATATTTTTTGCACCCTATACAGT GCTTGCAACTAATAAGTGAAGCAATTTATCTTGGATTATAGTACCGGTTTAAGTTGGATGAGTTACTAGTTTTTTATTCA AAAGTTTGATATGGCTGGATGTTTTCATTTATTTATTAGAGTGAAAGATTCCCATACGTGCTCGCATTGAGCTTGACTAG TATCGAGTGAAGGTATAACCAAAGAATGAATAAAAAATTGAGGACTTTATAAATAACACTGAGTATGTCATACTTGGGTG CCCATTTATGTAGTTGTGTTCAAGTCACAAATAAAATTCCTTTCATAAAATCTTACACAACCTTAACACTAACATTTGTT TCTGAAAGAAATCTCGTTCGTTGTTTAACATAACAACTTTGAATATTGTTTAGTTACAAATTACGACGTCTTATGATGAA GTTTCCAATTCGGATGAGAAATTTACAGAGAGAGTATATTGTAAGGGAGTAGAACTATATCCTGGGAACAAATTATTTGT CCGGAGCATGGATTAATTTTAGCCTTTTTGTTTTCATGTATAGTGCATGGTATGGAATATGGCTTTGGAGCACATGAGTA CCCAACAAGTGGTGTTTTTGAGGTGCAACCTAGAAGCTGTCCTGGCTTCATCTTCAGACGTTCAATATTGTTAGGCAGCA CTGATATGTCTTATTCAGAATTTCGATCTTTCATTGAGCGCCTTTCTGCGAAATATCATGGAGACACTTACCATCTGATT GCTAAGAATTGCAACCATTTCACAGATGAAGTTTGCCAACAACTAACTGGAAAGGCTATACCTGCATGGGTAAATCGGTT GGCTCGTGTTGGTGAGGATTCTATTTCTCTTTGCTTTGCTTAAACTGATTACAGATAAGCTGTACCTTGTCAATTTTATC TATTTTATGAAACTAACATTCAGATCTTGTATATGTTCTATTTTCAACCACTAGTTGATGTTTTAAATTAGATGTTTCTG TGTATGCACAAAAAAGTTCCATATCAGTGTGGAAATAAGTTAAGTCAGAGTTTGATGGGGATAATGACCTGCATCGCATA TAATTAGGCATTTGGGCGTTGGTTTTCTGAATCCGTTGATTGCATCTACTAGTCTAGTTGTAATCTGATCTCATTCTGTT TGAAGTTTCAGGTTCTTTCTGCAATTGTCTTCTGCCTGAAAGCCTTCAGGTTGCTGCTGTTAGACACCTTCCTGAACATC TTGAATGTTCTGGTAAGCTGTGAACTAAAGATAACTATATTAAGTATTTGTTTTACGACATTGGATCTTACAGATTGATT TTATCAGCTGTCCAAGAAATTAAAATCTAATGTGGGTGGCACATGGCTTATGATGCATCTACTATCTTTTCTACATATAA GTGCATTTTAATACTTAAGAAGGAAAAATGAAGAAAAATTGCATTCTAATGTAAGTCATGAAAACCAGAAAGAAACAGTT AACTTTGGTGCTTTTTCTTCTGTGAAAAATGAGATATTTTAGCTTTTCCTTCTCAAATACCATGAGACAAAGAACTTTGG TTAATTAACCTATGAGGTAACTAAATATGTCCTTGCAGATGATGAGGGATCAGAATCTGATGGCCTTTCGGAATCAGTTG ATAGTGAAGACGAGGGTTCAAATCACCATCTGCTAACTTCACCAACTCGTGAAGTCTCCTTTATAAGTGAAAAACCAATG ACTCTAGCGCGAGATCTCCAATGATTTTCATTTGTTGCTCCAATTATTGTTGTTGTTATTTATTAATGTTATTCTTTCTT GCTTCTAATGTATCTGCGATCTTAGCTCTCAGGGTGTAGCAAGTTTTCTAAACTGGAATATTGGATACCCAAGAGACATG TTTTGTATTACAAAGACGATAGCCTGTTGTATATTTCTTGTCTGTTTCAAATCGAATGGTTGTCTTCTAGATGCTATTAA TTTATGTACAAACAAAATTGTTTAAAAATGATTGTGTGGGGTGATATCTTTCTTTAGCCTAATCTATTCCTTTGTTATCA TTTAATGCTAAAACATGTTGAAGTAGGCTCCAAAAGTAAATGGTCCGTGTAAACTGCAAAATATTTTATGCCTTTAATTA CATAACATACGAGGTCAAGAGTTGTTGATAAAAAAAGCCAGGAAAATAGGCAAATTAGTTCTTGGAAGTTGGCTCTCACA ATCTGTCGAAAGAAATTGCTTGAATCCTCTGAGTGAAACATTAGTCATGCGGTTCTTTGGCTTTCCAACCGTTAGTGAAC AACAATGCACAA
CDS sequence (LotjaGi4g1v0199900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTCGTTGCCCTCAAGCTCGGGATCGGAAAATGTAGAGGATAGCAATAAAAAGAATAGTTCTATGGTGTATCTCAA TGTGTATGATCTTACGCCTGCCAACAATTATCTTTACGTATTCGGGGTTGGAATCTTTCATTCGGGTATAGAAGTGCATG GTATGGAATATGGCTTTGGAGCACATGAGTACCCAACAAGTGGTGTTTTTGAGGTGCAACCTAGAAGCTGTCCTGGCTTC ATCTTCAGACGTTCAATATTGTTAGGCAGCACTGATATGTCTTATTCAGAATTTCGATCTTTCATTGAGCGCCTTTCTGC GAAATATCATGGAGACACTTACCATCTGATTGCTAAGAATTGCAACCATTTCACAGATGAAGTTTGCCAACAACTAACTG GAAAGGCTATACCTGCATGGGTAAATCGGTTGGCTCGTGTTGGTTCTTTCTGCAATTGTCTTCTGCCTGAAAGCCTTCAG GTTGCTGCTGTTAGACACCTTCCTGAACATCTTGAATGTTCTGATGATGAGGGATCAGAATCTGATGGCCTTTCGGAATC AGTTGATAGTGAAGACGAGGGTTCAAATCACCATCTGCTAACTTCACCAACTCGTGAAGTCTCCTTTATAAGTGAAAAAC CAATGACTCTAGCGCGAGATCTCCAATGA
Protein sequence (LotjaGi4g1v0199900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSLPSSSGSENVEDSNKKNSSMVYLNVYDLTPANNYLYVFGVGIFHSGIEVHGMEYGFGAHEYPTSGVFEVQPRSCPGF IFRRSILLGSTDMSYSEFRSFIERLSAKYHGDTYHLIAKNCNHFTDEVCQQLTGKAIPAWVNRLARVGSFCNCLLPESLQ VAAVRHLPEHLECSDDEGSESDGLSESVDSEDEGSNHHLLTSPTREVSFISEKPMTLARDLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 221 | 218 | 3.2E-135 | – | |
| PANTHER | 4 | 221 | 218 | 3.2E-135 | ||
| Gene3D | 16 | 168 | 153 | 4.4E-38 | ||
| ProSiteProfiles | 22 | 159 | 138 | 61.215 | – | |
| SMART | 22 | 160 | 139 | 1.5E-58 | ||
| Pfam | 23 | 157 | 135 | 4.3E-49 | ||
| MobiDBLite | 172 | 206 | 35 | - | – | |
| MobiDBLite | 175 | 189 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0199900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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