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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0204800 |
| Transcript ID | LotjaGi4g1v0204800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein; TAIR: AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein; Swiss-Prot: sp|Q8I1F6|PPO3_DROER Phenoloxidase 3; TrEMBL-Plants: tr|I1K0N8|I1K0N8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0204800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:47554266..47558772) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAAGTTCTAAAACTCATCAATCCATGATGCATATCTTTGAATTTTGAAAGGATGCGTTGTCATGATAAATCTCCTT ACTTCCTACTTCTCCATGGAAACATGGAGGATCAATTTCTTCCTCTCTACTTGGGAGATAAAGGGAGTTCAACTCTCCAT AATATAATATCTACTCGCCAAAAAACCCACGAAAAAATACTAGTATAGGGAATGAATGAAATTACTAAACTACCCTCTCT AACTCCAATTCATTTTCTCTCATTTAAGAGTAAAGTTGTCCATTTACATTGATGCCCTCATACACCATATTCACTTTTAT CAATCTTATACAAAATTGATAGACGACAAGAACTGGAAGGAGGAGCACGACGCAGCCATTGATTTCTGAGTTGTGAACAA AACTCGGCGCGAAGCAATGAAAACGGAAGAAGCCATGGCTGAGTTGGAGCGAGTCCAAACCCACCTCCTCCAACGCATCT CAAAGCTCGAGCATTCTCTTCTCACCGACGACCCTAACACTCACACTGACACTAACACTGACGACACCGTCGCTCGCCTT TCTTCCATTCTGCGCACCAACGGCGTCGACGACTTCTCCTTCAAGAGGGTCCCATCCGACTACTACGATTCGCCGCTCGA AGTCCGCCGCGATGCCCTCGCCGCCGCCTCCATTCACCACCTCTGCAAGAGCATCGTTCTGGTCAACACGCAAGCCCCAT CAAACGTTGTTGATTGCAGCGATCGGAAAAATTCAAAGTACTATGTTGTTATTGTTCAGGTCCCATTGCTTTTGCTTCTT ATCTTTTTTCATTTTCTTTCTTCTCGTCTTCATGTTGCTCTGGTAACTCTATTTGCTTGAATTTGCAGTACACTGCTCGG TTCAATGCTGAGGCTGTGAAGAGCTTTCTGTTCTCGCTCAACAATGGAAGTATAGCCAAGAAGAAATTCAATTGTAAGCT ATTTGGTTCATAGTTTGTTCATAGCTATTTATTGATGTTGTATTGAATCCCTGAGTTTTTTTAGAATTGGGTAACCGTGA TTAATGATAATATGAAATTCTGTTGAGCATTGTGGCATTGAAAGAACTAGGAATTCCGTTTGTTCGTGATTCGTGAAGTA ATGGTGGTGGCGGAAGAACTGAATATAGTGCTTGGGATATGAGACCCTTCTCACAGTTGCTACACTTAAGAAATTGGCCT GTGTGTGTGTGTGCATTTGTTGTTTCTTAAGTTATGATTTTAATGGAGAGTCCAGGTAGAGTTGGTTAAGGAGGTTTCCC TGCTACATATGAGTTTTCCTGTCTTAGTACTTTGAGTCCATGAGCTTCTTTGAATTGAGCATAATAGGGGAACATTATGA CTTGCACATGAGTTGAGTGGGATTTTCCAACACTGAAGCCTCCCCTGCCGTCTTGTTCGCAACAGCTTACAGCACGGATT GCTTGCTTGTCAAGATAAAACCTAACAGCTATCCTTGCTTCGTACTGCCTGTTTCCCATGGCAACGGTCTTCCCTTTCTC TTGCTATCTCAATTTCACTGCCCACTATTGCTGTAATGCCAATTATCAATTCATTGATTAAATTAAGAAACTAACTTATG CAGGATTTGTCTTTGACTCATTGCTGTTATGTTGAAACTGGGTCAGGGTCAAGGAAAGCCCTCAAGATTTGTGATGTGAG AGGTACAAAGGCTGAATCTTCTCTTATAGTTGTAAAGCATGAAATGTCATTGAAGGTAGAGACTTGGAATTGGCGGTTTT CCCAGAAACAAAATTTGAAGTTTTTCTTTACGGTGCTGGGTGGATTCCATGAGTTGTTAGGAGTGTGTTGCAGCAACTGT TAGATGCATGTGATGGGATTTTGGCATGATTAGAAGATCACTGAGGTTAGGCGAAGTAGTTCAAATCCCTTAACATGGGA GGAGGGTATTTGGCAGCTTAGTGGTTACAGTTTTCAGTTGCTATCAAATCCAATGTATGAAAGTTTCAATTTTGAGTTGT CTACTGTAAATACTAACTAGCAATAGCTGGAGTGAATATTCTCACTCATTGAATTAGCTTTTAATGAGCTACATTGTCTC AGTTGACACTGGAGGGGAACTGAGACCAGAAACCCTCGATATGTAATGGTTTTTGCATGAAAATTCTAAGTGGGTGATAT GTGAAAACAATATATGAGAAGTGAAAAGTATGGGAGGTCCACCATACTTGCTGATACCCATCACTTTGTTGTACTGCTTC CACTTCTCTGAACTCAGTATATTTTCCTTGTTAAATTTTTATTTTAAATAATGTAATCTCTGTGTTCTTAAGGACATTCT ATCTCTCCTTATTAATCCTTTATCTTTTATTCCTTTTGTTAATATTTATGGAAAATTCTAATGCTTTCTATTTTCCCTTT TTAGATTTTCTATTTATTATATTTTTAACTTGACATTGATTAGAAGGTAGTAATTATTATTATTATTAATTGCAGTGAGG CTAGCTCCTGAGGAGACATCAACGGAGTTAACTGGATTTGGGCACAATGCAGTGACTTGTGTCGGCATGAAAACAGACAT TCCGGTAAAGACTGGACCTGTGAATTAGTATAGGAATCTTAATCATGTGATATATGTAAATAACTAAATATTGCATCTTG ACAAGAACTCTGTCACAAGTCCTTATTAATGCTGAAATGGTCATTTTCTTTTTAGCTTAGTGTATACAGATTATGTGATC TTTCTGATTACATCTATCATTTACGAAGTTTTTTTCCTGACTTATCTTCACATGTTCTGTCCTTTTTGATATCTTGTACT GGCACTTAAACCTTCTTTTTCCGCAATCTACAACTGGACACAACCACTTTTTCCCTGATGTTACGTTCTGACTGAGGGTC CATCATTCTTTTGAGAATGTCCCCTAGGATCTATATCGTCATGGAGCATCTGTGTAAAGTCTGAAGTCGTCCTTCCCATC TTTGTTCCAGCTTTTTCGCTGGTCCATATCTCTTTCTCTGTCTTTCCTTCTAAACTTCAGGTCTGGAGAGACTGGAAAAG GTATGTGATGGAGTACACTGAATTGTTTTATTCTTGAACTCAGAAGTCACCCATAATACAACAATAAACTGGCTGTTCCA GAGACCAAGGTGTCTGACATAGAGTGCCCTCTGTCCATAATACAGATTAACAACAGAACATGCATAATTACGCACCCTAC TACCGCATATACTCCTAATTAGTAATTGCCAGTAGTTATTTTTAATCATAACTACTACTCAGGAGTTCAGCCACTAACTG CTGTCACTAATTAACTCTAATTATTTCCTATGATGGAGGCATGATACTCATTTAAGCTTAAGTACTTGAAACATGTCGAG CATATGACCTAACTAGAATGGAATGAATGTAAAACCAGACATTTCCTCCTAAGACAGGTCAAATTTGAGAGATACCTTAC CACACACACACACCCTTTTGTGAATAATGTTCAAGGACTCAAGGTCCGCTTATTAATTAAAACATTTCTTCTGTTATTGC ATTATATTCAAATCATAATTCATTCTCTTCTCGAGTTATATACCATTGTGGCTTATCTATAGTAATGTAGCCTTCAGCTT CTTCCTTAATTGATTGGATATCATGGATTGATTCAGGTGATTCTGGATGAAGCTATTGTAAAACTAACTCCAGATTTCTT TTGGTTGGGTGGCGGTGAGGTTGATCTGAAGCTAGGGATCCGAACATCTCAATTAATCAGATTTATCAACCCATTCATCG TCAATTGTAGCAGTGGTTGATTTTGTTGGTTAGAATGTGGTCAGGATGATGAGTTTACGAGGCTGGCTGTCATTTGCAGC TTATTTTTATACGATTTGAAGTTGAATTGTCGTCCATGAGGAATATATTTATTTGTCATAGCGAGTTTTAAGCTCTGCTT TAGTGATTGTAATGTATGTTTTACAGAGATTTGAAGGCAACCAGCAGCATGACTTCATATTTTGTATTTGTTGAAAGTTA ATAATATCATCATAAAGATAAGTTAGCTCCTTTTTATTCTGATTGAACCATTTCACTTTCAGATAATGAGAGGGCTATGG TGGTATACGCCGTACTTATGAATGTCCTAGCCATGAAGAGATTTAAAATTCTAAGTCCTGGAGCATAAAGCTTTGGATAA GATAAATGTTGATGATAGAAAATAGTAATAACTGTAATTTCCCGTTTTCAGGGATGTGGATGATTAGTCAACAAATCCAT GTCTTATCTCTTCTATAAGAGAATATTTGTATTTTGTTTTCCTGAAATAATTTTCAATATCCAATTGTTTGTCAAGTTGG TATTAGAGCTACATGCATAAGAATCTAAGGACATGGATCTCTTTCATGTCTATGAATGGAAATGTGATGTAGATGCTATT CATTATAAGAACATAAGGAGGAAATAGAATCTTCAAGTTTCTTGCTGGACATGACTCTGAACTATATGAGGTGGGAAGAA GTATGATTGGTAGGATATATACCTCTT
CDS sequence (LotjaGi4g1v0204800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAACGGAAGAAGCCATGGCTGAGTTGGAGCGAGTCCAAACCCACCTCCTCCAACGCATCTCAAAGCTCGAGCATTC TCTTCTCACCGACGACCCTAACACTCACACTGACACTAACACTGACGACACCGTCGCTCGCCTTTCTTCCATTCTGCGCA CCAACGGCGTCGACGACTTCTCCTTCAAGAGGGTCCCATCCGACTACTACGATTCGCCGCTCGAAGTCCGCCGCGATGCC CTCGCCGCCGCCTCCATTCACCACCTCTGCAAGAGCATCGTTCTGGTCAACACGCAAGCCCCATCAAACGTTGTTGATTG CAGCGATCGGAAAAATTCAAAGTACTATGTTGTTATTGTTCAGTACACTGCTCGGTTCAATGCTGAGGCTGTGAAGAGCT TTCTGTTCTCGCTCAACAATGGAAGTATAGCCAAGAAGAAATTCAATTTGAGGCTAGCTCCTGAGGAGACATCAACGGAG TTAACTGGATTTGGGCACAATGCAGTGACTTGTGTCGGCATGAAAACAGACATTCCGGTGATTCTGGATGAAGCTATTGT AAAACTAACTCCAGATTTCTTTTGGTTGGGTGGCGGTGAGGTTGATCTGAAGCTAGGGATCCGAACATCTCAATTAATCA GATTTATCAACCCATTCATCGTCAATTGTAGCAGTGGTTGA
Protein sequence (LotjaGi4g1v0204800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTEEAMAELERVQTHLLQRISKLEHSLLTDDPNTHTDTNTDDTVARLSSILRTNGVDDFSFKRVPSDYYDSPLEVRRDA LAAASIHHLCKSIVLVNTQAPSNVVDCSDRKNSKYYVVIVQYTARFNAEAVKSFLFSLNNGSIAKKKFNLRLAPEETSTE LTGFGHNAVTCVGMKTDIPVILDEAIVKLTPDFFWLGGGEVDLKLGIRTSQLIRFINPFIVNCSSG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 225 | 219 | 1.2E-84 | – | |
| PANTHER | 7 | 225 | 219 | 1.2E-84 | – | |
| Gene3D | 40 | 224 | 185 | 1.6E-27 | ||
| SUPERFAMILY | 60 | 223 | 164 | 3.66E-21 | ||
| CDD | 79 | 221 | 143 | 5.11521E-20 | – | |
| Pfam | 86 | 215 | 130 | 1.5E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aminoacyl-tRNA editing activity | The hydrolysis of an incorrectly aminoacylated tRNA. |
Expression pattern of LotjaGi4g1v0204800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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