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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0206200 |
| Transcript ID | LotjaGi4g1v0206200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NADH dehydrogenase 1 beta subcomplex subunit 8; TAIR: AT5G47570.1 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit; Swiss-Prot: sp|Q9FGK0|NDUB8_ARATH NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; TrEMBL-Plants: tr|A0A1J7HAG4|A0A1J7HAG4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0206200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:47728696..47733880) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGAAAGATCCAACTTAAATTGGACCAAGAACAAACAAAAAAGGCAGAAGAAAATGATCCAAAACGATGTCGTTTAGT CTCTGGGTGACTGTAACAATAGGCTCAGCTGGAAGAATAGGAAGAACAAAGAACCGAGAGAGAAGATAATCGAATCGATC ATGGCAGGAAGATTGACGAACTCAGCATCAAGGATCTTGGGTGGAAACGGCGTCGTTCTCCGATCTGTAGCTTCCTCTCT CCGCCTCCGTTCCGGCATCGGTCCCCCCGTCGGCAAACACATCGTCCCTGACAAACCCGTAAGCTTCTCTCTCTTAACCT ATCACATTCCATTCTGAAAATTTTCCAGAATCCTAAAAATTTCCATTTTTGAATTTGGGGTTTGTTTCAGCTTCCTGCGA ATGATGAACTTGTGTGGGATAATGGTACTTCATTACCCGAACCCTGTATAGATCGCATTGCTGATACTGTTGGAAAGGTA ACTGTTTTTTCATTATCGAAATTTCTGGGTAAAATTGAAAGCATAAGATAATTGGGTTTTTTTTTGTTAATTTGAAACCA GTATGAAGCATTGGCCTGGCTCTGTGGGGGATTGAGTTGTTTTGCGTCTCTGGGATTGTTGGCAGTGTGGAATGATAAAG CCTCCAAGATTCCATTTGTAAGTTTATATGTGTGTTCCTGCTTAGTTTTAGACTGGGATTTGGTGATATTTAGCTAGGTA TGGTTATTGCTGATTTCAATTTTGTGATAGTTGTTCATCAAATTGAAATGTTATGTTATGAGGTCAATGAGTGTTGGAAG TTTTTTACTGTTTATAGTTATCATTCTCAGTTAGTGGTGCAAAGTGGCCATCCTCGAAAATGCTATGACGGTATGGCTGC TGCACTGAAGATTATAGATGCAAGACTAAATTTATATTTCACACACGCATAAATGCTAAAAACTAAAGGAATATTCAAAA TTAAAGGCATCCATGGTTAAAGTCCTAAACTCTCTATCACCATAAAAATGGAAAATGATGGACTTAATTAGTAAAAAGGT ACAAAGAGAGGTTATGAGTGTGAAGAACACAACACAAACAAAAATTGAACACTATGCAGTATGCAACACAGCAACAACAA CAAAAACCTTATCCCATTAAGTGAGATCGGCTATATGGATCTCACCATGACATTGAGCTCAATCAAAAACCAGATTATGA GAAATGTTATTGATAATAAATATCATTTTTAACAATATCTTCCCAAGTTCTTTTTGGCCTCTCTCTACTTCTCTTCACTA GACTAAGAACCATGTTATCAACCGTGCCTCCAAAGGTTTTCTTTGTACATGTCCATACCACCTTAATTGATTTTCTGTCA GCTTCTCCACGAGAGGTGTCACCCCACACCTTTCTAGTGTGACATTCTCATTTCTGCTACTCCAGCTTTGTTCTCATGTT GCCCAATATATCTTCGATAGAGAATACCAGGTCTTATAGCGGTTTGGTAAAACTTTCCTTTGAGTTTGATAGGTTCTTTG CGGTTCTCCACTTTAACTTCCAGTTTGAACTCTGTGTGTAATATCTTTGTCAATTTCCCCATTATTTTGTATAATCGGTC CAAGGTAACCCTGAAACTTTTGGTATGATGTCGTTTCCATATTTTACTTCTAGATTTCTTCCAACATTAGTCTTACTAAA ATTGCAATGCATATACTATTACTATGTCTTACTCCTGTTTGATCTAAAACCCTTAGATTCCAAAATCTTCCTCCAAATCT CAAGTTTACTAGTAACCGCTTCCCTGGATTCTGCAATTAGAACTATATCCCTGGTAGGAATGCTCTTCTGTATATCCCTG GTAAGCATCTCCAAAACCAAATTAAAAGGTACAGGCTCAAGGCTAAGCCTTGATGTTAACCTATCTTTATTGGGAAGTGA TTAGTCACGCCCCGAGGAGTTCTCACCCCGCTGTTTCCCCCTCTTACATGTCTTGTATAGCTCGAATATATGCTACACAA ACACCTTTCTTTTCCATAGACTTCCACAACACTTCCATAGGCTCACGATCATATGCTTTTTCGAAGGGGATAAAATCTAT ATGCAAGTCTCTCTTTATACTTCGATACTTTTCCATCAGCCTTCCTAGGAGGCAGATGGCTTATGTTGTAGACCTTCCTG GCATAAAACCAAATTGATTCCCTTTTATCCTAGTCTCCTCCCTTACAGTTTTATTAATGGCGGAGAGCCAAAAACCCGCC ATACATATCAATTAATGGTGGCCTATGGCAGGATATCGACCGTGGCGGAGGCCAAAAAACCGTCGTTAGAACTCGTCATG GCGCCACCATGACCGATATTTGATAACACTGCTCCCTTAGTCAATGTTAATCACCTTTTCCTGTAATTTCATAGTCTGGC TCAAAAGTTTTATCCATCTATAGTTACTGCAATTATGAAGATTCCCTTTTTTGGTATACATAGGGACCAAAGCACTTCTC TATGCATCTGTCATATGTTTGGATGTCAAATTCTCATTGAACAACTTAGTTAGCCAATTGATACCTTGGTCTCCTACTCA TTTCCAAACTTCAATTGGCATATCATCAGGACCCACTGCTTTAGCATTGACCATGCGCTTATGAGCGAGCTTCTTGAACT TCTCCGACTTGAATTGTATGATAGTTAAATTTTGCTCATCCTCTCTCACTTCCAAGCTTTCCATGTTAATGTTTGATCCG TGTCCATCATTGAAAAGTTATCGAAGTAATTCTTCCATTTCTCTCTAATATTTTCATGAGCAACTAAATCTCTTCCATCC TCAACCTTAATACATCTCACTTGGTCCAAATCTCTTGATTTTCTTTCTATGTTTTTGGCAAGCTTATAAATTTTTTTTTC ATTTTCCATTTTTTGTTACTTGATCTCTATAAAATTCGTCATTCGCTTTGGATCGTCCCTCACTCACAGCTTTCCTTGCT TTGTTTCTAGCCTTCCAATAGTGTTTCCAATTTTCAGCGCTGTTGTATCCATGTAAAGTCTTAAAACACTCCCTTTCAAA TTTTACCTTTTCTTGCTCACTTTCTTCACCAACCAAGATTCCTTATCTCTTAATCCAAAACCATTAGATACACCCAGTAC TTCTTTGGCCACCCTCGAAATTAGCACAAACACAAACACAAACACACACAATTTGAATATACTATGCAACGCAGCACAAA CAAAATTTGAACAGAAATCTGCGTAAATAGACTTGTGAGTAAGTAGCGGCTAGCGAGCAGTGCGTGTGCCGGCTAGGGTT GGCTGGAGATGGTGCTATCCAGCAGTTGGTCACTGCTTGGTTTGCAACAGAGTTAAGCTCTTCGTGTTTTTTGTACAAAA GATGTGTGATTCCGGAAATAGGTTTCCAAACCCAATTATGTTTCTATGCCAACAATAAACGGGAAATCATGAAACCTTAA AAAAAGGTTGCAAACCTCTGACCTCAGAAAATGGGGGGGGGGGGGATCGATACTTACAACTGTTCTAGTATAGCGGCCAT GATTTTCCGTTATAATGGCAAAGATTGTTGGTGCAACAGCCTCAGGAAAGTCCCGGAACTCTGCTCTGCTCTAGGGTACT AGTACTACTAGTCATATCTTCATCTATAAAGATCTCACCTGTGTCTATTACTCTGTTTATGTGCTTTCTTTAGGATGGTA GGATATTGTTCGCCTTCCCCATTCTTCATCCTTTGTGCATTACAACCTGCAATTTTGACGGAGTGACAGCAGCAAGTTGG AAAACTTGCACCCCAGCTGCTAATGGAAGTCAACTTCTGTCTGTAGAAGAATTACAACTAACCTTAAAGGCTAAAACATG AATTTAGCTTTCTCATTACAACCATATATGATTCTATCAGAAAGACTGTTCCGGGATTCCAACTAAGTTCCATTAGAAAC TACAAAAAACCATGAGGAATTACTGAAACAATTTAACGTGGGCCTGGGATTGGTTCACTCCTCTGCATAATATTTATTTG CAGTTATCCCCACACTGGCAAGGCAGGCTGGCTACTGAACCAGCCATCTCATTGCCTATAGCCTGTCCTTTTAAAAAGGA GCAGTTGCTATTACATTTGAGGTGTGTGATTACATGATATAGAACTGAACTTGTGAATGAAGTTTGAATTGGAGATTGAT AGAATGAGGGAGGGGGTAGAGTGTTGAAGCATGAACAGGTGTTATCACTTATCAGAATGTCTATTAACATCCTTCAAAAA TCACGAAACGTGGTTGTAGTTTAGCACTTTGTTCTTAAAGTTACCTATTTTATTCGAAAGGGGGGAAATGAGGAGAACAT AGATGAATATGTGGTCTGATTAATTATCCTTTTTGTACTTCGTATAATCTTCACATATCCCGATTGCACTCTTGCCTATG TTTATGGCCATATTTTCTATGATATTTTCCTTTTTTTGAAGCTTCATATGCATTGTTTCTTCTTACATATATGCTGATAA ATTCTATATTACTGTGTCAGGCACCCAAAGTGTATCCATATGACAATCTGGCAGCGAGGATTTGTAATCAACCATAGGTA TATGCAAGGCAATGATGGAATGGACTTCTTGTTTGATGAACTTGTTCTTTTTTCGTTTGTTCTCTTCTGTAGTTAAAAAT AATGGATTGTGGAAGACATGCTGAAACTAACCACAGGAATGGATGAGCCGAATCTGGTTGTTCCTTTAAATCATTCTCAT ACAGTCATACTTACGTTGGTTATTTTGAGGGGTGAAATTAATCAAATTATGCTCAAATCAAGAGCGGATATGATTCTGCC TACTGTTTTGCTATACTAGAATATCGTTTATGATTTTATTATGGTTACAATTTATTCTTCACTAGTTGCATTCTTTGCAA TTGCTATCAACTGGTAAACGTGCCCAAATTATATGATTTGGGATGTCTGTTGAATGTGTTTGAAAGAATTAAAATGAGAC TTTCATGGCCAAGTTTGAGGTTTAAAATCCGAAGCGGTTCTTATTCATTTGACATGTTTATAAGAGTAGTATGGACATTT TCAATCAAAAACATTTCTAAAGGAAAAATAAAAGTTTTTTTTTTTTTACATCGGAAAGATAATTTGCACCATTCAGGGAT CGATCACTAGATCTTTCTCTCCACAACCCATATGTCTGCCAATTTTTACCACTTCCAATTTTTAC
CDS sequence (LotjaGi4g1v0206200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAAGATTGACGAACTCAGCATCAAGGATCTTGGGTGGAAACGGCGTCGTTCTCCGATCTGTAGCTTCCTCTCT CCGCCTCCGTTCCGGCATCGGTCCCCCCGTCGGCAAACACATCGTCCCTGACAAACCCCTTCCTGCGAATGATGAACTTG TGTGGGATAATGGTACTTCATTACCCGAACCCTGTATAGATCGCATTGCTGATACTGTTGGAAAGTATGAAGCATTGGCC TGGCTCTGTGGGGGATTGAGTTGTTTTGCGTCTCTGGGATTGTTGGCAGTGTGGAATGATAAAGCCTCCAAGATTCCATT TGCACCCAAAGTGTATCCATATGACAATCTGGCAGCGAGGATTTGTAATCAACCATAG
Protein sequence (LotjaGi4g1v0206200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGRLTNSASRILGGNGVVLRSVASSLRLRSGIGPPVGKHIVPDKPLPANDELVWDNGTSLPEPCIDRIADTVGKYEALA WLCGGLSCFASLGLLAVWNDKASKIPFAPKVYPYDNLAARICNQP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 77 | 77 | - | – | |
| PANTHER | 1 | 122 | 122 | 2.2E-58 | ||
| Phobius | 78 | 98 | 21 | - | – | |
| TMHMM | 78 | 97 | 20 | - | – | |
| Phobius | 99 | 125 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0206200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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