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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0210700 |
| Transcript ID | LotjaGi4g1v0210700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Triose-phosphate transporter family protein; TAIR: AT1G12500.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500; TrEMBL-Plants: tr|A0A0L9TPU7|A0A0L9TPU7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0210700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:49141512..49144429) extracted from Lotus japonicus Gifu genome v1.2.
CCTAACATGTGCAAATGCTGCTCATAGAGTGGAAGAGCTGGAGGCAAAGGTCTAACCTAAGCTGCTACCTTTTCCAAAGA CAAACAAGGTCCACCAATTGGCAAATGCATAATCCCCCCCAACCCCCTTTGTTTTATCCTTTTATTATCATTGGTCCATT CTCATCCACCGTCCACAAATCACAAGTGCCATCGTGCGTTCAAATATTCTCCCAAATCCACCATCATCCTCAGCTCCATT TCACTTCAGATCCAAAACATCAGAATCCACAAAACCCCAATTGGCCATGGTGGAGGCACAAAAATGGACCACCAGAAGAA TGAGCCATCCGAGGTTGTCAGCCCTCGACACCGCCGACCAACAACAAGTCCTCCTCGACATCCCTCCGACACCACCGGCA GACCAGCGTAACAACCACCACAACAACCACCTTGTGGTCACCGTGCTCATCATCGCATCATGGTACCTCTCCAACATCGG TGTCCTCCTCCTCAACAAGTACCTCCTCGCCTTCTACGGCTTCCGTTACCCAATCTTCCTCACAATGCTCCACATGATCT CCTGCGCCGTCTACAGCTATGCCGCCACCACCTTCCTCCGCCTCGTCCCCTCCCAGCAAATCCACTCCACCAAACAATTC CTCAAGATCCTCGCCCTCACCGCCATCTTCTGCTTCTCCGTCGTCTGCGGCAACACCTCCCTCCGCTACATCCCCGTTTC GTTCAATCAAGCCATCGGCGCCACCACCCCCTTCTTCACCGCCGTCTTCGCCTTCATCATCACCTGTAAGCGCGAGACCG CCGGGGTTTACCTCGCCCTCTTGCCAGTCGTCCTCGGAATCGTCGTCGCTAGCAACAGCGAGCCCCTCTTTCACCTCTTC GGATTCCTCGTCTGCCTCGGCTCCACCGCGGGGCGTGCTCTGAAATCGGTGGTGCAGGGGATTTTGCTAACCTCCGAATC GGAGAAGCTTCACTCCATGAATCTCCTTCTCTACATGGCTCCCATGGCTGCGCTGATTTTGCTACCTTTCACTCTCTACA TTGAAGGGAATGTGCTCTCTCACACCATTGAGAAGGCGAAGGGTGATCCCTTTATCGTGTTCTTGCTTGTGGGGAACGCC ACCGTTGCTTATTTGGTGAATTTGACGAATTTTCTGGTGACAAAGCATACCAGTGCTTTGACATTGCAAGTTTTGGGGAA TGCTAAGGCTGCTGTGGCGGCTGTTGTTTCGGTTTTGATATTCAGGAACCCTGTCACGGTGATGGGAATGGCGGGGTTCG GCGTTACAGTCATGGGTGTGGGGCTGTACAGTGAGGCCAAGAAGAGATCCAAAGTTACAACTCATTGATGAATACTCACA CAGATAATATACTTCTCAACATTGATTCCTTTTCATTTTTTGGATTTTCATAGAGGCATAAAGTTTTTTCTTATAATGTT GCACAATTTTGCTTTGGTTTAATTGTCCTTTTGAGGAGTTGGATCTAGTTCCAGCTATTGGTCACACTGTATAGGAAGAA ACAGAAAAGGGAAATGGTTACTTCACCTATGTTCTTTTTCTCTTGCCCATTTTGTAAAATGCTTATTGCCCTCTGGCAAC TTACATAAAGGATTCAGAGAAAAGAAAAAGCACCTTTGTGCATTTGGTGAGGGAGGAAAATTCTGCTTCCCTCCATTTTG TCAATCACAAGCTAATGTTACAAACTTTAAGTAATCAGTTTGTCCTTTATGATTTTGCAATTGTGAAACTTTTGGAGCTT TGGTTGGGTCTTGTTAGCTTTAAGTTCACTTCTGATTGATTTGTGAGCTGAGTATAAATTACTTGCATTGTTTGCCTTCT TAAGCTGATACTTGTTAGTCATCTAAGGTTGAACTCCTCAGCAACCTGCTTCATAATTACTGATGTACAAATGTTAATAG TTCAAACATGGGGTATGCACTTGTGTACTGATTGGTTTGTGCTAAGGGCTTGTATTTTGGTTTCGTATTGCTTTGCATTC CAAAGCAATTCAAAAAATTATCAATGAACTTGATTGAACAAATTGAATTGGTATGAGTTGAGCTGATTTCCATACTTTAT TTGCTGGTTCTTATGGTGAACATAGATGTAAATAACAATTCAGTTCAATCAATCAAGTTTACTGATAAATTTTTTCTTGC TATGGAGGGAAGGAACCTCAATTCGTTCAGGAACCAGCACACCAAGCTATGGAGGGAAGACTCTAGACCATTCCCATGCC AACTAATTATGTTATTTTAAGTTTTTAACATGGCACCAGAAGCTAAATATAGTTTCCTAGCACTTCCATATGCCATAGAA TGCACAATTTGCAGTCGTCCTTCCCTTCTTATTTGGTGGCTTTGCTCAGTCAATGGGTGGATGTTTAATTTGATTGAACA GGGTCATAACTGCAAAGATTGCTGTGACATGTATATTGGCAATGCTTAGTAATTTTCACACTCACCATCACACTTGTGTC CTAAACTCTAGTTTAAGTTTCAAGGTAGTTCAGAGTTCAACAACATCCACTATCCAAGACATTGAAAAATGGCATTTCGT CCATGCGTTTGGCCTAATCTCTTGGAAACTATCTGCTAGTACGCTATCTGCCTCAAGTTGGTTGACGGTTAGATTGTATC TTAATATCTTTCTCAATCTAGCTATTTGAGATCTTGGCTTGACAAATTTCCATACTTGTTAAAGGTCTAGGTAGGTATGC ACTTGTTTGAAGGTCAGTCCAATGTATTGGATTCTGGTTCCGAAAGAAGCTGTCATTCAATATTTGTCTTAGGACATATA GTATGAACTTGACTTGTGTGCTTGGGGGATGTTAGGTGTGTAACGATGTCACTAAAGAATTTTGTGAACACTTAAGAGCG TGTGACTTATTACCAAAAATTGTTAAATTGATAAAGGA
CDS sequence (LotjaGi4g1v0210700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGAGGCACAAAAATGGACCACCAGAAGAATGAGCCATCCGAGGTTGTCAGCCCTCGACACCGCCGACCAACAACA AGTCCTCCTCGACATCCCTCCGACACCACCGGCAGACCAGCGTAACAACCACCACAACAACCACCTTGTGGTCACCGTGC TCATCATCGCATCATGGTACCTCTCCAACATCGGTGTCCTCCTCCTCAACAAGTACCTCCTCGCCTTCTACGGCTTCCGT TACCCAATCTTCCTCACAATGCTCCACATGATCTCCTGCGCCGTCTACAGCTATGCCGCCACCACCTTCCTCCGCCTCGT CCCCTCCCAGCAAATCCACTCCACCAAACAATTCCTCAAGATCCTCGCCCTCACCGCCATCTTCTGCTTCTCCGTCGTCT GCGGCAACACCTCCCTCCGCTACATCCCCGTTTCGTTCAATCAAGCCATCGGCGCCACCACCCCCTTCTTCACCGCCGTC TTCGCCTTCATCATCACCTGTAAGCGCGAGACCGCCGGGGTTTACCTCGCCCTCTTGCCAGTCGTCCTCGGAATCGTCGT CGCTAGCAACAGCGAGCCCCTCTTTCACCTCTTCGGATTCCTCGTCTGCCTCGGCTCCACCGCGGGGCGTGCTCTGAAAT CGGTGGTGCAGGGGATTTTGCTAACCTCCGAATCGGAGAAGCTTCACTCCATGAATCTCCTTCTCTACATGGCTCCCATG GCTGCGCTGATTTTGCTACCTTTCACTCTCTACATTGAAGGGAATGTGCTCTCTCACACCATTGAGAAGGCGAAGGGTGA TCCCTTTATCGTGTTCTTGCTTGTGGGGAACGCCACCGTTGCTTATTTGGTGAATTTGACGAATTTTCTGGTGACAAAGC ATACCAGTGCTTTGACATTGCAAGTTTTGGGGAATGCTAAGGCTGCTGTGGCGGCTGTTGTTTCGGTTTTGATATTCAGG AACCCTGTCACGGTGATGGGAATGGCGGGGTTCGGCGTTACAGTCATGGGTGTGGGGCTGTACAGTGAGGCCAAGAAGAG ATCCAAAGTTACAACTCATTGA
Protein sequence (LotjaGi4g1v0210700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEAQKWTTRRMSHPRLSALDTADQQQVLLDIPPTPPADQRNNHHNNHLVVTVLIIASWYLSNIGVLLLNKYLLAFYGFR YPIFLTMLHMISCAVYSYAATTFLRLVPSQQIHSTKQFLKILALTAIFCFSVVCGNTSLRYIPVSFNQAIGATTPFFTAV FAFIITCKRETAGVYLALLPVVLGIVVASNSEPLFHLFGFLVCLGSTAGRALKSVVQGILLTSESEKLHSMNLLLYMAPM AALILLPFTLYIEGNVLSHTIEKAKGDPFIVFLLVGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFR NPVTVMGMAGFGVTVMGVGLYSEAKKRSKVTTH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | - | – | |
| PANTHER | 4 | 349 | 346 | 3.6E-188 | – | |
| PANTHER | 4 | 349 | 346 | 3.6E-188 | – | |
| TMHMM | 48 | 70 | 23 | - | – | |
| Phobius | 49 | 69 | 21 | - | – | |
| Pfam | 52 | 342 | 291 | 3.2E-46 | ||
| Phobius | 70 | 80 | 11 | - | – | |
| Phobius | 81 | 106 | 26 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 107 | 117 | 11 | - | – | |
| SUPERFAMILY | 111 | 190 | 80 | 5.36E-6 | – | |
| Phobius | 118 | 139 | 22 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 140 | 144 | 5 | - | – | |
| Phobius | 145 | 165 | 21 | - | – | |
| TMHMM | 146 | 165 | 20 | - | – | |
| Phobius | 166 | 171 | 6 | - | – | |
| Phobius | 172 | 188 | 17 | - | – | |
| TMHMM | 172 | 189 | 18 | - | – | |
| Phobius | 189 | 193 | 5 | - | – | |
| TMHMM | 193 | 212 | 20 | - | – | |
| Phobius | 194 | 212 | 19 | - | – | |
| Phobius | 213 | 232 | 20 | - | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 233 | 250 | 18 | - | – | |
| SUPERFAMILY | 240 | 342 | 103 | 8.5E-5 | – | |
| Phobius | 251 | 269 | 19 | - | – | |
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 270 | 291 | 22 | - | – | |
| Phobius | 292 | 297 | 6 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| Phobius | 298 | 319 | 22 | - | – | |
| Phobius | 320 | 324 | 5 | - | – | |
| TMHMM | 323 | 342 | 20 | - | – | |
| Phobius | 325 | 342 | 18 | - | – | |
| Phobius | 343 | 353 | 11 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0210700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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