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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0212100 |
| Transcript ID | LotjaGi4g1v0212100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G12420.1 ACT domain repeat 8; Swiss-Prot: sp|Q9LNA5|ACR8_ARATH ACT domain-containing protein ACR8; TrEMBL-Plants: tr|I1MUV8|I1MUV8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:49418146..49421336) extracted from Lotus japonicus Gifu genome v1.2.
CGGAACTTTAAATTCCGTATTTAATAAAATGGGGTGCAAAGCCTAAGGGGTGGGGCACCAAACTCAATTCCCCAATCAAA GCGAGGGTTGCGGAAGAGTAGTAACTCTCTCACTCTCACAATATCACAACGCTCTACTACACAGTTTGGTAAGAAGGGTA ATGCATTAAAAGCCCACCGTTTTGAATTTTCACCAACGTCGTTTCAGAAGGTGGTGGTTATTACTACATATAACCGCAAT CTCGCTACCGTTTCCTATCAGAATTTCCCTCTTTTCTCTCCTCTCTCCGGCGAAGAAGATGGAAAGGTCTGGTTGTACGG ACGAGTATGAAAAACTCGTGATTCGCATGAGCACACCCAGGTTTGTCTCTTATCTTCAACCTTTCTCTTATTTTCAGTTT TAGTCCCTTTTGTTTGAGGTTTTTCTGTATGATAGTTTGAGATTCATCACTGAATTGCTTCATTTTTTGTTGAACTCTGT TGCTATGTTCATGGGAATGACTTTTACCCTGGTTCATGACTCATGTGTGTTGTTGTCAAAAGTCGTGAAAAATTCTCAAA AGACGGGAAAAGTGGTTTTTTCTCCTAATTCCGACCGACTTTTTCAAATTTATAACAATTTTTTGACTTTTCTGTGCTTG CATGTGAGACTCTATCTACTTTTTTCTTCCAGAATGTGTTTGTGATTTCACTAACTTTGACTATTTTGCTTGATTCAGGG TTGTGATTGACAATTCTGTGTGTTCCGGTGAAACAATAGTCAAGGTAAGTTTCATAAAAAAATCATTTTTCTCCTTCACA AATTGGGGGTTTTCTAGTGTAAAATGTAAATCAGGGAGATTGGACTCTAATTTTTGTCTGATTTGGTGGAATTTGCAGTT TGATAGCGCTAGGAATCATGGGATTCTTTTGGAAGCAGTACAAGTGCTTACTGATCTTAACCTTTCGATTAAGAAGGCAT ATGTTTCCTCTGATGGAAGGTGGTTCATGGATGGTAAGCTTATTTTTTCATTCTCTTTCTTTTGCTGTGCTAATTTCGAT TTCGCGTACGCTGAAATTCGGGTGTTCAATGTTCAGTTTTCCATGTAACGGATCAAAATGGGAACAAGCTAACAGATGAG AGCGTTTTAAGATATATTGAACAGGTATTAATTGTGGAAAATTGTTGCTTTACAGGTTCTAATGCAGTTTTTTATCAAAA TTGATTGAATTTCTCACAGTTTGAATTTTCTCTGTATGTTATTTCAGTCACTTGGTGGCATTCACGATGGGATAACCATT CATAAAAATGGTTTCACTGCTCTCGAATTAACGGGCACAGACCGTGTTGGTCTTCTCTCGGAGGTGTTTGCTGTTCTTGC TGACTTGCAATGCAATGTGGTGGATGCTAAGGTTTGGACACACAATGGCCGGATCGCCTCCCTAATTCATGTGAAAGACT GCAATTCCGGGACCCCAATTGAGGAGGATCCTCAGAAAATTAATAAGCTTGAAGCACGTTTAAGAAATGTTTTGAAGGGA GACAATGACATAAGGGGTGCGAAAACTTCCATCTTTAATGCTGTCATCCACCCTGATAGAAGGCTCCACCAAATGATGTT TGCTGATCGTGATTACCAGTGGAAACCCATATTCAAGGGTGCTTCTGGTACCTCATTAGTGGCCGTCCAAAATTGGGCAG AAAGGGGTTATTCGGTTGTTTATGTTCAGTGCAAGGATCGAACTAAGCTTTTGTTTGATGTTGTGTGCAATTTGACAGAC ATGGAATATGTTGTGTTCCATGCCACTATCAATACAACAAGTGACCAAGCATACCAGGTGATTATTATTGGACATGAGAT GCATTGCCTTTTGTGCTTGCACTTGGTTTATATGTTGAATTAACATAAATAATTCGTCATCACAGGAGTTTTATATTAGA CATAAGGATGGCACCCCAATTAGTTCAGAACCGGAGCGTCAACGTGTAATTCAATGCTTGCAAGCTGCGGTGGAAAGAAG GGCTTCTGAGGTAAAGTATCCTTTTTTTTCACTTTTTCTTTTGTTGAATTATTTTAACTTATAACCTTGTGATATGAACC TAAACTCACTAAGATCAATAGCATGCTCACGATCGGCTTTTCTTTAATTAGAATCAATTCCGGCACCTAGAAACTACTCG CATATGCTTATTCCCAAAATTGATTTTAGCTTCAGAATTAACTGTTTAAGATTTTCCAAACACGCCATAATTAATTGCCA ATTCTTTGAATACAGGGTGTTAAGCTAGAGTTGTGCACGGAAGACAGGCCGGGGCTTCTAGCTGAGGTGATGAGAACTTT CCGAGAGAATGGGTTGAATGTGACAAGGGCTGAGATATCTACCACAGGGGACAAAGCTGCAAATGTTTTCTATGTGACAG ATGCAATAGGATACACACCTGACCCAAAAATCATAGAATCTGTGAGGCAGAAAATTGGTTTAAGCAATTTGAAAGTGAAA GAGTTGCCATTTGTGTGTCATGAGAAGGTTGAGAGGGAAGATCAATCAGTTGGAGTTGGTGGGGCAGTGTTGTTGTGCCT GGGGAGCCTCGTCAGAAGGAACCTGTACAATTTGGGTTTGATCAAATCATTTTCTTAAAGCAGAAAAGGTGGGGAAGAGA GGGAATTTTGGAGTGTGGGAGATACTTTCAACTTTTAATAGGCATAATATTCTTTGCTTCAGGTTTGGACTTTGTGTACA TAAGAAGAAAAAGGTGGAATTTGGTGATAGTTGAATTTTCACTTGGTTGTGTTGGATTTGGTAGGTGAAAACTAACTACA TATACAGCTGGAGGGATGGGGCCTCTACCATTTTAAATGCTTTGCGTGAAGAAAGGAAGAGAGTGGGGATTGCATAAGTG GTTGTTGTCCTTGGTCGTGAGGTTGTGAAATTGAAAAATATATTCTTTGGTAGATCAGGAAGTTTAGGTAGAGGCAGAAC AGATTGGGTTCATATTCACTAATATGTGTACATAACGACGTTTCATTTATTATTATTATTATTTTTTTTGTCAATATGCA TTGAGGAATTTGGGATGATCTTTCACTGGATACGCAGTGGGCCTATATTTAAAAAGACTTGTCACTTCTGGTAGACAATC CCCTACATGACCTTTGTGTTTTGGGCTTCTCTGAATAATATCATATGCAAAGCATTTATTGATTAAAAAAG
CDS sequence (LotjaGi4g1v0212100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGGTCTGGTTGTACGGACGAGTATGAAAAACTCGTGATTCGCATGAGCACACCCAGGGTTGTGATTGACAATTC TGTGTGTTCCGGTGAAACAATAGTCAAGTTTGATAGCGCTAGGAATCATGGGATTCTTTTGGAAGCAGTACAAGTGCTTA CTGATCTTAACCTTTCGATTAAGAAGGCATATGTTTCCTCTGATGGAAGGTGGTTCATGGATGTTTTCCATGTAACGGAT CAAAATGGGAACAAGCTAACAGATGAGAGCGTTTTAAGATATATTGAACAGTCACTTGGTGGCATTCACGATGGGATAAC CATTCATAAAAATGGTTTCACTGCTCTCGAATTAACGGGCACAGACCGTGTTGGTCTTCTCTCGGAGGTGTTTGCTGTTC TTGCTGACTTGCAATGCAATGTGGTGGATGCTAAGGTTTGGACACACAATGGCCGGATCGCCTCCCTAATTCATGTGAAA GACTGCAATTCCGGGACCCCAATTGAGGAGGATCCTCAGAAAATTAATAAGCTTGAAGCACGTTTAAGAAATGTTTTGAA GGGAGACAATGACATAAGGGGTGCGAAAACTTCCATCTTTAATGCTGTCATCCACCCTGATAGAAGGCTCCACCAAATGA TGTTTGCTGATCGTGATTACCAGTGGAAACCCATATTCAAGGGTGCTTCTGGTACCTCATTAGTGGCCGTCCAAAATTGG GCAGAAAGGGGTTATTCGGTTGTTTATGTTCAGTGCAAGGATCGAACTAAGCTTTTGTTTGATGTTGTGTGCAATTTGAC AGACATGGAATATGTTGTGTTCCATGCCACTATCAATACAACAAGTGACCAAGCATACCAGGAGTTTTATATTAGACATA AGGATGGCACCCCAATTAGTTCAGAACCGGAGCGTCAACGTGTAATTCAATGCTTGCAAGCTGCGGTGGAAAGAAGGGCT TCTGAGGGTGTTAAGCTAGAGTTGTGCACGGAAGACAGGCCGGGGCTTCTAGCTGAGGTGATGAGAACTTTCCGAGAGAA TGGGTTGAATGTGACAAGGGCTGAGATATCTACCACAGGGGACAAAGCTGCAAATGTTTTCTATGTGACAGATGCAATAG GATACACACCTGACCCAAAAATCATAGAATCTGTGAGGCAGAAAATTGGTTTAAGCAATTTGAAAGTGAAAGAGTTGCCA TTTGTGTGTCATGAGAAGGTTGAGAGGGAAGATCAATCAGTTGGAGTTGGTGGGGCAGTGTTGTTGTGCCTGGGGAGCCT CGTCAGAAGGAACCTGTACAATTTGGGTTTGATCAAATCATTTTCTTAA
Protein sequence (LotjaGi4g1v0212100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERSGCTDEYEKLVIRMSTPRVVIDNSVCSGETIVKFDSARNHGILLEAVQVLTDLNLSIKKAYVSSDGRWFMDVFHVTD QNGNKLTDESVLRYIEQSLGGIHDGITIHKNGFTALELTGTDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIASLIHVK DCNSGTPIEEDPQKINKLEARLRNVLKGDNDIRGAKTSIFNAVIHPDRRLHQMMFADRDYQWKPIFKGASGTSLVAVQNW AERGYSVVYVQCKDRTKLLFDVVCNLTDMEYVVFHATINTTSDQAYQEFYIRHKDGTPISSEPERQRVIQCLQAAVERRA SEGVKLELCTEDRPGLLAEVMRTFRENGLNVTRAEISTTGDKAANVFYVTDAIGYTPDPKIIESVRQKIGLSNLKVKELP FVCHEKVEREDQSVGVGGAVLLCLGSLVRRNLYNLGLIKSFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 440 | 439 | 1.2E-248 | ||
| PANTHER | 2 | 440 | 439 | 1.2E-248 | – | |
| SUPERFAMILY | 30 | 101 | 72 | 3.82E-9 | – | |
| CDD | 33 | 100 | 68 | 3.47564E-39 | – | |
| ProSiteProfiles | 34 | 111 | 78 | 8.298 | ||
| SUPERFAMILY | 111 | 186 | 76 | 2.37E-13 | – | |
| Gene3D | 113 | 191 | 79 | 2.2E-10 | – | |
| CDD | 114 | 188 | 75 | 1.3769E-35 | – | |
| ProSiteProfiles | 115 | 200 | 86 | 11.159 | ||
| Pfam | 116 | 164 | 49 | 1.3E-8 | ||
| CDD | 245 | 319 | 75 | 3.31024E-41 | – | |
| SUPERFAMILY | 321 | 389 | 69 | 4.3E-13 | – | |
| CDD | 323 | 394 | 72 | 3.90844E-37 | – | |
| Gene3D | 324 | 408 | 85 | 2.9E-9 | – | |
| ProSiteProfiles | 325 | 412 | 88 | 13.813 | ||
| Pfam | 329 | 387 | 59 | 1.7E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0212100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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