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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0212100 |
| Transcript ID | LotjaGi4g1v0212100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G12420.1 ACT domain repeat 8; Swiss-Prot: sp|Q9LNA5|ACR8_ARATH ACT domain-containing protein ACR8; TrEMBL-Plants: tr|I1MUV8|I1MUV8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:49418802..49420763) extracted from Lotus japonicus Gifu genome v1.2.
TACTTTTTTCTTCCAGAATGTGTTTGTGATTTCACTAACTTTGACTATTTTGCTTGATTCAGGGTTGTGATTGACAATTC TGTGTGTTCCGGTGAAACAATAGTCAAGGTAAGTTTCATAAAAAAATCATTTTTCTCCTTCACAAATTGGGGGTTTTCTA GTGTAAAATGTAAATCAGGGAGATTGGACTCTAATTTTTGTCTGATTTGGTGGAATTTGCAGTTTGATAGCGCTAGGAAT CATGGGATTCTTTTGGAAGCAGTACAAGTGCTTACTGATCTTAACCTTTCGATTAAGAAGGCATATGTTTCCTCTGATGG AAGGTGGTTCATGGATGGTAAGCTTATTTTTTCATTCTCTTTCTTTTGCTGTGCTAATTTCGATTTCGCGTACGCTGAAA TTCGGGTGTTCAATGTTCAGTTTTCCATGTAACGGATCAAAATGGGAACAAGCTAACAGATGAGAGCGTTTTAAGATATA TTGAACAGGTATTAATTGTGGAAAATTGTTGCTTTACAGGTTCTAATGCAGTTTTTTATCAAAATTGATTGAATTTCTCA CAGTTTGAATTTTCTCTGTATGTTATTTCAGTCACTTGGTGGCATTCACGATGGGATAACCATTCATAAAAATGGTTTCA CTGCTCTCGAATTAACGGGCACAGACCGTGTTGGTCTTCTCTCGGAGGTGTTTGCTGTTCTTGCTGACTTGCAATGCAAT GTGGTGGATGCTAAGGTTTGGACACACAATGGCCGGATCGCCTCCCTAATTCATGTGAAAGACTGCAATTCCGGGACCCC AATTGAGGAGGATCCTCAGAAAATTAATAAGCTTGAAGCACGTTTAAGAAATGTTTTGAAGGGAGACAATGACATAAGGG GTGCGAAAACTTCCATCTTTAATGCTGTCATCCACCCTGATAGAAGGCTCCACCAAATGATGTTTGCTGATCGTGATTAC CAGTGGAAACCCATATTCAAGGGTGCTTCTGGTACCTCATTAGTGGCCGTCCAAAATTGGGCAGAAAGGGGTTATTCGGT TGTTTATGTTCAGTGCAAGGATCGAACTAAGCTTTTGTTTGATGTTGTGTGCAATTTGACAGACATGGAATATGTTGTGT TCCATGCCACTATCAATACAACAAGTGACCAAGCATACCAGGTGATTATTATTGGACATGAGATGCATTGCCTTTTGTGC TTGCACTTGGTTTATATGTTGAATTAACATAAATAATTCGTCATCACAGGAGTTTTATATTAGACATAAGGATGGCACCC CAATTAGTTCAGAACCGGAGCGTCAACGTGTAATTCAATGCTTGCAAGCTGCGGTGGAAAGAAGGGCTTCTGAGGTAAAG TATCCTTTTTTTTCACTTTTTCTTTTGTTGAATTATTTTAACTTATAACCTTGTGATATGAACCTAAACTCACTAAGATC AATAGCATGCTCACGATCGGCTTTTCTTTAATTAGAATCAATTCCGGCACCTAGAAACTACTCGCATATGCTTATTCCCA AAATTGATTTTAGCTTCAGAATTAACTGTTTAAGATTTTCCAAACACGCCATAATTAATTGCCAATTCTTTGAATACAGG GTGTTAAGCTAGAGTTGTGCACGGAAGACAGGCCGGGGCTTCTAGCTGAGGTGATGAGAACTTTCCGAGAGAATGGGTTG AATGTGACAAGGGCTGAGATATCTACCACAGGGGACAAAGCTGCAAATGTTTTCTATGTGACAGATGCAATAGGATACAC ACCTGACCCAAAAATCATAGAATCTGTGAGGCAGAAAATTGGTTTAAGCAATTTGAAAGTGAAAGAGTTGCCATTTGTGT GTCATGAGAAGGTTGAGAGGGAAGATCAATCAGTTGGAGTTGGTGGGGCAGTGTTGTTGTGCCTGGGGAGCCTCGTCAGA AGGAACCTGTACAATTTGGGTTTGATCAAATCATTTTCTTAA
CDS sequence (LotjaGi4g1v0212100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTTTTCCATGTAACGGATCAAAATGGGAACAAGCTAACAGATGAGAGCGTTTTAAGATATATTGAACAGTCACT TGGTGGCATTCACGATGGGATAACCATTCATAAAAATGGTTTCACTGCTCTCGAATTAACGGGCACAGACCGTGTTGGTC TTCTCTCGGAGGTGTTTGCTGTTCTTGCTGACTTGCAATGCAATGTGGTGGATGCTAAGGTTTGGACACACAATGGCCGG ATCGCCTCCCTAATTCATGTGAAAGACTGCAATTCCGGGACCCCAATTGAGGAGGATCCTCAGAAAATTAATAAGCTTGA AGCACGTTTAAGAAATGTTTTGAAGGGAGACAATGACATAAGGGGTGCGAAAACTTCCATCTTTAATGCTGTCATCCACC CTGATAGAAGGCTCCACCAAATGATGTTTGCTGATCGTGATTACCAGTGGAAACCCATATTCAAGGGTGCTTCTGGTACC TCATTAGTGGCCGTCCAAAATTGGGCAGAAAGGGGTTATTCGGTTGTTTATGTTCAGTGCAAGGATCGAACTAAGCTTTT GTTTGATGTTGTGTGCAATTTGACAGACATGGAATATGTTGTGTTCCATGCCACTATCAATACAACAAGTGACCAAGCAT ACCAGGAGTTTTATATTAGACATAAGGATGGCACCCCAATTAGTTCAGAACCGGAGCGTCAACGTGTAATTCAATGCTTG CAAGCTGCGGTGGAAAGAAGGGCTTCTGAGGGTGTTAAGCTAGAGTTGTGCACGGAAGACAGGCCGGGGCTTCTAGCTGA GGTGATGAGAACTTTCCGAGAGAATGGGTTGAATGTGACAAGGGCTGAGATATCTACCACAGGGGACAAAGCTGCAAATG TTTTCTATGTGACAGATGCAATAGGATACACACCTGACCCAAAAATCATAGAATCTGTGAGGCAGAAAATTGGTTTAAGC AATTTGAAAGTGAAAGAGTTGCCATTTGTGTGTCATGAGAAGGTTGAGAGGGAAGATCAATCAGTTGGAGTTGGTGGGGC AGTGTTGTTGTGCCTGGGGAGCCTCGTCAGAAGGAACCTGTACAATTTGGGTTTGATCAAATCATTTTCTTAA
Protein sequence (LotjaGi4g1v0212100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVFHVTDQNGNKLTDESVLRYIEQSLGGIHDGITIHKNGFTALELTGTDRVGLLSEVFAVLADLQCNVVDAKVWTHNGR IASLIHVKDCNSGTPIEEDPQKINKLEARLRNVLKGDNDIRGAKTSIFNAVIHPDRRLHQMMFADRDYQWKPIFKGASGT SLVAVQNWAERGYSVVYVQCKDRTKLLFDVVCNLTDMEYVVFHATINTTSDQAYQEFYIRHKDGTPISSEPERQRVIQCL QAAVERRASEGVKLELCTEDRPGLLAEVMRTFRENGLNVTRAEISTTGDKAANVFYVTDAIGYTPDPKIIESVRQKIGLS NLKVKELPFVCHEKVEREDQSVGVGGAVLLCLGSLVRRNLYNLGLIKSFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 368 | 368 | 4.8E-206 | ||
| PANTHER | 1 | 368 | 368 | 4.8E-206 | – | |
| SUPERFAMILY | 39 | 114 | 76 | 1.76E-13 | – | |
| Gene3D | 41 | 119 | 79 | 1.6E-10 | – | |
| CDD | 42 | 116 | 75 | 3.18361E-36 | – | |
| ProSiteProfiles | 43 | 128 | 86 | 11.159 | ||
| Pfam | 44 | 92 | 49 | 1.0E-8 | ||
| CDD | 173 | 247 | 75 | 6.59611E-42 | – | |
| SUPERFAMILY | 249 | 317 | 69 | 3.15E-13 | – | |
| CDD | 251 | 322 | 72 | 7.34146E-38 | – | |
| Gene3D | 252 | 336 | 85 | 2.2E-9 | – | |
| ProSiteProfiles | 253 | 340 | 88 | 13.813 | ||
| Pfam | 257 | 315 | 59 | 1.3E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0212100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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