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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0216400 |
| Transcript ID | LotjaGi4g1v0216400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450 family protein; TAIR: AT4G12300.1 cytochrome P450, family 706, subfamily A, polypeptide 4; Swiss-Prot: sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase; TrEMBL-Plants: tr|A0A072UQP0|A0A072UQP0_MEDTR Cytochrome P450 family protein; Found in the gene: LotjaGi4g1v0216400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:50938140..50940300) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTTGCTATTTTCCATTGCATTACTTTGCTCTCACGTCACTCTGTTCATCTCTTCTCATCTTGTAATTTTCGTTGTTC AACTGTTTCCATCTGGACATTGGACAACACAATAATAGCACCAACACTAATATATATATTTGGTCATTTAATAAATGGAT GTTAAGAAAACTAATTTAGATAAGAGATAATTTATGATATTTCATTGGACAGATATTCTTTATATTACCTTATTTCCACA TCTTATGACTTATCCTTCAACTATTTCCTTTCTGACATCTAAACACCAATAGTTATTGCACCATGATTCAGCTATCAACT TTCCTTCAAAACCTGAACTTGAAGGATTGGTACAGTGACACCACAAACCTGATCATAGCAACCTTAGCCATTTCAGCCAT CACTTGGTACACATGGCTCTTCTTCCTCAAACCCAAAGCCCAGACCCCACCACTGCCACCAGGCCCACCGGGCCTCCCCA TCTTCGGAAACCTTCTCTCCCTCGACCCGGAACTTCACACTTACTTCGCCGGGTTAGCCCGTACCCATGGCCCCATTTTC AAGCTCTGGCTTGGGAGCAAGCTTGGAATCGTCGTCACCTCACCTTCCATGGCGCGTCACGTGCTCAAGGACCACGACAC CGTCTTCGCCAACCGTGATGTCCCCGCCGCCGGGAGAGCGGCAACCTACGGCGGCGCCGACATCGTGTGGAACCCGTACG GACCAGAGTGGCGGATGCTGAGGAAAGTTTGCGTGCTCAAGATGCTCAGCAACACCACGCTGGACTCCGTGTACGATCTC CGCCGCAACGAGGTTCGGAAGACGGTCGGGTACCTGCGGAGCCGGGCCGGGTCGCCGGTGAACGTGGGGGAGCAGGTATT TCTGACGGTGCTGAACGTGATTACGAACATGATGTGGGGAGGGTCGGTGGAAGGGGCGGAGAGGGAGACCTTGGGGGCGG AGTTCAGGGAGGCGGTGGCGGATATGACGGCTCTTCTCGGGAAACCGAACTTGTCGGATTTCTTTCCCGGGTTGGCCCGG TTTGATTTGCAAGGAGTGGAGAAACAGATGCATAAGGTGGTGCCGCGTTTTGATAGAATATTTGAGAAGATGATCGGTGA ACGGGTGAAGATGGAGTCGGAGGGGAAGAGGAGTGAAAGCAAGGATTTTCTGCAGTTTTTGTTGAATTTGAAGGAAGAGG GTGATTCCAAGACCCCACTTTCCATCACCCATGTTAAGGCCCTTCTCATGGTACGTTTGTTTCCATTGATTGATTTCACT TTCCAATTTTGTTTGGTGTGAATTTCTTTTTAAATTCTGAAACTTTTGGTGTCACTATTTTAAAGCTTTTACCAATGGGA AAAGAAAAATTGAAAGAGATTGAATGTATCTAACACTGTTGGAAATTGTTGGATGAGCATAAACAGGACATGCTTGTAGG TGGAAGTGACACATCCTCCAACACAGTTGAGTTTGCGATGGCGGAAATGATGCAGAAGCCAGAGGTAATGAAGAGAGTTC AAGAAGAATTAGAAGGTGTAGTTGGGAGAGATAACATGGTAGAAGAGTCTCATATTCATAAGCTTCCCTATTTGTTGGCT GTGATGAAGGAAACTCTTCGGTTGCACCCTGTGCTTCCACTTTTAGTTCCACACTGCCCAAGTGAAACCACTTCTGCAGG AGGCTACACGATCCCAAAGGGTTCTAGGGTGTTTGTGAATGTGTGGGCTATTCATAGGGACCCTTCCATTTGGGAGAACC CTCTAGAATTTGATCCTACAAGGTTTTTGGATGCTAAATGGGATTTTAGTGGGAATGACTTTAATTACTTTCCCTTTGGG TCTGGAAGAAGAATTTGTGCAGGAATTGCTATGGCAGAGAGGTCCGTTTTGTACTTTCTAGCAACACTAGTGCACTTGTT TGATTGGACAGTACCAGAAGGAGAAAAGTTAGATGTGTCTGAAAAATTTGGTATTGTTCTAAAAAAGGAAACACCTCTGG TTGCCATCCCCACCCCTCGACTTTCCAATCATGATCTTTATAAATAGAATTGAATGTAATATTCATACACCAATCAAGGG AATCTGTATTCTACACTGAAGATTATAATCGTTTGTAGTTTGTGTATCAAAGTTTTTTTCCAACATTTTATTCATTTTCT A
CDS sequence (LotjaGi4g1v0216400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCAGCTATCAACTTTCCTTCAAAACCTGAACTTGAAGGATTGGTACAGTGACACCACAAACCTGATCATAGCAAC CTTAGCCATTTCAGCCATCACTTGGTACACATGGCTCTTCTTCCTCAAACCCAAAGCCCAGACCCCACCACTGCCACCAG GCCCACCGGGCCTCCCCATCTTCGGAAACCTTCTCTCCCTCGACCCGGAACTTCACACTTACTTCGCCGGGTTAGCCCGT ACCCATGGCCCCATTTTCAAGCTCTGGCTTGGGAGCAAGCTTGGAATCGTCGTCACCTCACCTTCCATGGCGCGTCACGT GCTCAAGGACCACGACACCGTCTTCGCCAACCGTGATGTCCCCGCCGCCGGGAGAGCGGCAACCTACGGCGGCGCCGACA TCGTGTGGAACCCGTACGGACCAGAGTGGCGGATGCTGAGGAAAGTTTGCGTGCTCAAGATGCTCAGCAACACCACGCTG GACTCCGTGTACGATCTCCGCCGCAACGAGGTTCGGAAGACGGTCGGGTACCTGCGGAGCCGGGCCGGGTCGCCGGTGAA CGTGGGGGAGCAGGTATTTCTGACGGTGCTGAACGTGATTACGAACATGATGTGGGGAGGGTCGGTGGAAGGGGCGGAGA GGGAGACCTTGGGGGCGGAGTTCAGGGAGGCGGTGGCGGATATGACGGCTCTTCTCGGGAAACCGAACTTGTCGGATTTC TTTCCCGGGTTGGCCCGGTTTGATTTGCAAGGAGTGGAGAAACAGATGCATAAGGTGGTGCCGCGTTTTGATAGAATATT TGAGAAGATGATCGGTGAACGGGTGAAGATGGAGTCGGAGGGGAAGAGGAGTGAAAGCAAGGATTTTCTGCAGTTTTTGT TGAATTTGAAGGAAGAGGGTGATTCCAAGACCCCACTTTCCATCACCCATGTTAAGGCCCTTCTCATGGACATGCTTGTA GGTGGAAGTGACACATCCTCCAACACAGTTGAGTTTGCGATGGCGGAAATGATGCAGAAGCCAGAGGTAATGAAGAGAGT TCAAGAAGAATTAGAAGGTGTAGTTGGGAGAGATAACATGGTAGAAGAGTCTCATATTCATAAGCTTCCCTATTTGTTGG CTGTGATGAAGGAAACTCTTCGGTTGCACCCTGTGCTTCCACTTTTAGTTCCACACTGCCCAAGTGAAACCACTTCTGCA GGAGGCTACACGATCCCAAAGGGTTCTAGGGTGTTTGTGAATGTGTGGGCTATTCATAGGGACCCTTCCATTTGGGAGAA CCCTCTAGAATTTGATCCTACAAGGTTTTTGGATGCTAAATGGGATTTTAGTGGGAATGACTTTAATTACTTTCCCTTTG GGTCTGGAAGAAGAATTTGTGCAGGAATTGCTATGGCAGAGAGGTCCGTTTTGTACTTTCTAGCAACACTAGTGCACTTG TTTGATTGGACAGTACCAGAAGGAGAAAAGTTAGATGTGTCTGAAAAATTTGGTATTGTTCTAAAAAAGGAAACACCTCT GGTTGCCATCCCCACCCCTCGACTTTCCAATCATGATCTTTATAAATAG
Protein sequence (LotjaGi4g1v0216400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIQLSTFLQNLNLKDWYSDTTNLIIATLAISAITWYTWLFFLKPKAQTPPLPPGPPGLPIFGNLLSLDPELHTYFAGLAR THGPIFKLWLGSKLGIVVTSPSMARHVLKDHDTVFANRDVPAAGRAATYGGADIVWNPYGPEWRMLRKVCVLKMLSNTTL DSVYDLRRNEVRKTVGYLRSRAGSPVNVGEQVFLTVLNVITNMMWGGSVEGAERETLGAEFREAVADMTALLGKPNLSDF FPGLARFDLQGVEKQMHKVVPRFDRIFEKMIGERVKMESEGKRSESKDFLQFLLNLKEEGDSKTPLSITHVKALLMDMLV GGSDTSSNTVEFAMAEMMQKPEVMKRVQEELEGVVGRDNMVEESHIHKLPYLLAVMKETLRLHPVLPLLVPHCPSETTSA GGYTIPKGSRVFVNVWAIHRDPSIWENPLEFDPTRFLDAKWDFSGNDFNYFPFGSGRRICAGIAMAERSVLYFLATLVHL FDWTVPEGEKLDVSEKFGIVLKKETPLVAIPTPRLSNHDLYK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 42 | 23 | - | – | |
| PANTHER | 25 | 502 | 478 | 2.9E-97 | – | |
| Gene3D | 41 | 516 | 476 | 1.3E-136 | ||
| Phobius | 43 | 522 | 480 | - | – | |
| SUPERFAMILY | 52 | 514 | 463 | 2.1E-130 | ||
| Pfam | 52 | 505 | 454 | 1.7E-109 | ||
| PRINTS | 79 | 98 | 20 | 1.3E-47 | ||
| PRINTS | 103 | 124 | 22 | 1.3E-47 | ||
| PRINTS | 195 | 213 | 19 | 1.3E-47 | ||
| PRINTS | 310 | 327 | 18 | 1.3E-47 | ||
| PRINTS | 321 | 338 | 18 | 1.4E-10 | ||
| PRINTS | 330 | 356 | 27 | 1.3E-47 | ||
| PRINTS | 373 | 391 | 19 | 1.3E-47 | ||
| PRINTS | 374 | 385 | 12 | 1.4E-10 | ||
| PRINTS | 414 | 438 | 25 | 1.3E-47 | ||
| PRINTS | 450 | 460 | 11 | 1.3E-47 | ||
| PRINTS | 451 | 460 | 10 | 1.4E-10 | ||
| ProSitePatterns | 453 | 462 | 10 | - | ||
| PRINTS | 460 | 483 | 24 | 1.3E-47 | ||
| PRINTS | 460 | 471 | 12 | 1.4E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0216400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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