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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0219700 |
Transcript ID | LotjaGi4g1v0219700.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, putative; TAIR: AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1; TrEMBL-Plants: tr|I3SX84|I3SX84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0219700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:51764318..51766699) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTCTCCCTTACTTTTTCTTTTCTTCATATCTCTCTCCTTATTCTACCTCTTCCACCTCAAAAAGAGGTAGAGGTGT GTAAGTAACATTATTGGCGTTATTCCATCTATTCACACATGCATATCACATCTATCGCAGAACTACCACACCTCATTAGA CTTAGAACCCCCAGCTCTTTTATTAGAAGCACCGGGCACTGCTATTCATTGAGGTGCTAGTTATCTCTCTCTCAATATGG AGGTGAAAACCACACACCAGTTAGAAGGAGGCACTTATGACAGGGAAGCTGAAGTGAAAGCCTTCGATGAAACAAAACTT GGTGTGAAAGGTCTCGTAGAGTCTGGGGTGACAAAAATCCCACGCATCTTCAACTCTGGCAAGTTGGACATCACTGAAAA TGCACCTTCTGAATCCATGTTCAGTGTTCCCATCATAGACCTCAAAGACATTCACAACAACCTGTCTCTGCGTGCAGCGA TAATTGATCAAATTCGAAGTGCTTGCGAAGAGTGGGGATTTTTCCTGGTGACTAACCATGGAATTCCAATAACTCTCTTG GATGATATGATTGATGGAATCCGTAGGTTTCATGAACAAGTTCCTGAGGTAAGGAAACAATATTACACTCGAGATTTAAC AAGTAAAACTCTGTACTTTTCAAATGCTAGCCTGTACAGAGACAAATATTCCAATTGGAGAGATACTGTTGGATGTTTAA TGGCTCCTAAGCCACCCAAACCTGAAGAATTGCCTCATGTATTTAGGTAATAATTTCTTTGAAGTATTTGATTTTCTGTC ATATGTCTAGCTGCTTTCATATCATTGTTAAAAGGAGAATATTAAACTAAGACATACATGCAGACATCTAACATATACCC AGGGTGGGACAGGATAAGAAGAGAGAGAAGTAATAGATGTTATAAGTAATTTCTTTGGCGTCAATTGGATATTTGCAACG AATATCTACGAATCGTTTTCCTTGTCCAAACACCTATAGATTAGTACAACTTTGTTAAATTTCATATATGGAATATGGTT TTTCTTAGCATTAGTTACTTCACTTGTCCATTTTAGTATGAGAAATTGTTAATTTGAATATTTTGATAAAATATATATAT TTTCTTGCAGAGACATTATAATTGAATATTCCAATCAAGTAAAGGCATTGGGTTACAAAATGCTTGAGTTATTGTCAGAG GCCCTTGGCCTTAACCCATCCTATCTCAAAGATTTGGAATGTGGTGAAGGACTATTTATGCAGGGTCATTACAGTCCACC ATGCCCTGAACCTGATTTAACTTTGGCCGCTTCCAAGCACACTGATACTGACTTCTTCACAATTGTTCTACAAGACCAAC AGGGTGGTCTTCAAGCACTTCATGCTGATCAGTGGATTAATGTTCCTGCTGTCCATGGAACTCTTGTTGTGAACATGGGT GATCTACTACAGGTAAATGTTCTATTACATCGATTTTCATGAATCATGATTTTGTTTGTATTTTTTAGATTATTTGTTTT GAGATTTTAGAAACATTTAGAAAACGTCTGTGTCTTGCCGGTTTCTTGAGTAGTTTGTTGGTTTGGAAAATATCACCTAC CAACAGATTTGGTTCGAAAACAGTGCGACGTCAAAGAAAAAAAGGCATGTGGCAGAAAATTGTGACCATATCTATCATTA TTTACCATGTTTTATTGTTGAGGCTTGAATCGCTTGATGTATATAGATCTGTATTGGGTCTGTTTAGTGTAATTATTGCC ATGTTTCTAATCACTTGTTATTGTTACAGCTTATAACAAATGACAAATTTCTCAGTGTTTATCACCGGATCTTAGCGAGT CATGGAGGGCCAAGAGTTTCAATAGCTAGCTTCTTTGTAAACCCAGTTCAAGAAGAAGGTAAACCAAAGGTTTATGGTCC TATTAAGGAATTGTTATCAGAAATAAACCCACCAGTCTATAGGGAAACGACTATATCAGAATTCTTGGCACATCATTTCG TGAAGGGACTTGATGGGAACTCTGCCTTGAAGCCTTTCAGGTTGGGAAAGGAACCAATTTCCACTCCATAAAAGAATTTG CTCAAATTGATGCCCTCTTGATTCTCATTATGGGATGGATGTAATACTTTATCTAAATAACAAGGCAGTTTGTGGCTATC CAGGATAAATGACCACCTTTGTAAAACAGTACTTGGGTTCTCAAGACTGAATTAATAAATGGACTATCTTTATGTGTTGA AAGACTTAAATATGTTTATAGTCATTACAAAATAAGATTGAGTCTAAATTGGTTCTTGTAAAATATTTGCAACGTTTTAG GTCCTCACTCAAATCTTTCCAAAATAAGATTTGGAAGAAGATGAATCTAAGAGTGAATCTAG
CDS sequence (LotjaGi4g1v0219700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTGAAAACCACACACCAGTTAGAAGGAGGCACTTATGACAGGGAAGCTGAAGTGAAAGCCTTCGATGAAACAAA ACTTGGTGTGAAAGGTCTCGTAGAGTCTGGGGTGACAAAAATCCCACGCATCTTCAACTCTGGCAAGTTGGACATCACTG AAAATGCACCTTCTGAATCCATGTTCAGTGTTCCCATCATAGACCTCAAAGACATTCACAACAACCTGTCTCTGCGTGCA GCGATAATTGATCAAATTCGAAGTGCTTGCGAAGAGTGGGGATTTTTCCTGGTGACTAACCATGGAATTCCAATAACTCT CTTGGATGATATGATTGATGGAATCCGTAGGTTTCATGAACAAGTTCCTGAGGTAAGGAAACAATATTACACTCGAGATT TAACAAGTAAAACTCTGTACTTTTCAAATGCTAGCCTGTACAGAGACAAATATTCCAATTGGAGAGATACTGTTGGATGT TTAATGGCTCCTAAGCCACCCAAACCTGAAGAATTGCCTCATGTATTTAGAGACATTATAATTGAATATTCCAATCAAGT AAAGGCATTGGGTTACAAAATGCTTGAGTTATTGTCAGAGGCCCTTGGCCTTAACCCATCCTATCTCAAAGATTTGGAAT GTGGTGAAGGACTATTTATGCAGGGTCATTACAGTCCACCATGCCCTGAACCTGATTTAACTTTGGCCGCTTCCAAGCAC ACTGATACTGACTTCTTCACAATTGTTCTACAAGACCAACAGGGTGGTCTTCAAGCACTTCATGCTGATCAGTGGATTAA TGTTCCTGCTGTCCATGGAACTCTTGTTGTGAACATGGGTGATCTACTACAGCTTATAACAAATGACAAATTTCTCAGTG TTTATCACCGGATCTTAGCGAGTCATGGAGGGCCAAGAGTTTCAATAGCTAGCTTCTTTGTAAACCCAGTTCAAGAAGAA GGTAAACCAAAGGTTTATGGTCCTATTAAGGAATTGTTATCAGAAATAAACCCACCAGTCTATAGGGAAACGACTATATC AGAATTCTTGGCACATCATTTCGTGAAGGGACTTGATGGGAACTCTGCCTTGAAGCCTTTCAGGTTGGGAAAGGAACCAA TTTCCACTCCATAA
Protein sequence (LotjaGi4g1v0219700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVKTTHQLEGGTYDREAEVKAFDETKLGVKGLVESGVTKIPRIFNSGKLDITENAPSESMFSVPIIDLKDIHNNLSLRA AIIDQIRSACEEWGFFLVTNHGIPITLLDDMIDGIRRFHEQVPEVRKQYYTRDLTSKTLYFSNASLYRDKYSNWRDTVGC LMAPKPPKPEELPHVFRDIIIEYSNQVKALGYKMLELLSEALGLNPSYLKDLECGEGLFMQGHYSPPCPEPDLTLAASKH TDTDFFTIVLQDQQGGLQALHADQWINVPAVHGTLVVNMGDLLQLITNDKFLSVYHRILASHGGPRVSIASFFVNPVQEE GKPKVYGPIKELLSEINPPVYRETTISEFLAHHFVKGLDGNSALKPFRLGKEPISTP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 11 | 353 | 343 | 1.1E-107 | – | |
PANTHER | 11 | 353 | 343 | 1.1E-107 | – | |
Gene3D | 20 | 352 | 333 | 6.1E-97 | ||
SUPERFAMILY | 27 | 360 | 334 | 7.55E-88 | – | |
Pfam | 64 | 163 | 100 | 3.4E-17 | ||
ProSiteProfiles | 216 | 316 | 101 | 11.788 | ||
Pfam | 223 | 313 | 91 | 3.3E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0219700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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