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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0221100 |
| Transcript ID | LotjaGi4g1v0221100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT4G23060.1 IQ-domain 22; Swiss-Prot: sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31; TrEMBL-Plants: tr|A0A072UPT6|A0A072UPT6_MEDTR Calmodulin-binding protein; Found in the gene: LotjaGi4g1v0221100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:52086137..52090343) extracted from Lotus japonicus Gifu genome v1.2.
GAACGAGGTTAGTAGGGCAATTAATTAACACACATGATTGAGCTTATAATCCCCAAGCAATAAAAAAAGAGTTAAATACT AGTTGGTGTGGGTTATGATGGTCCAAAAGGGGACACTTTTTCCTATCATTCCTCTGTTTCCTCATCCCCATAGCTTCTTC ATTTCTCTCACTCCCTCACTCTCTCGTGTCCATATTAATTTACACATTCTTCTTCTCTTCAAGTGAAGACAAAACCATTT GCTTCTTAGAACAACAACAACAACAAGAAATGGGAAAAGCATCGAAGTGGTTACGCGGGATTCTCGGTCTCAAGAAATCA GAACGCAGTTCAAGTTCAACTCCCAAGCCACCGAAAGAGAAACAACGACGATGGAGCTTCGTCAAATCATACAGAGAAGA ACAACAACAACAACATAGCCACCCTCATTCTACCGGTAACTCTCCGGCCACGTTCCAAACGGAACACAGTGACAACAAGC ACGCCATCGCAGTCGCTGCGGCCACGGCAGCGGCGGCGGAGGTGGCTGTTGCTGCCGCTCAAGCGGCTGCGGCTGTTGTG AGACTTACAAGCAGCAGCAACAACGTCAGGATCCGTGAAGAATGGGCGGCCGTTAAGATCCAAGCCGCTTTTCGAGGAAG CTTGGTTCGTTTCCATTAACAATTTCACTCCTTTCTTCTTCATCATTAGTTTTAATTACTTCTATCCTTGTCTGTGTGTT TGAATGCTTTTTTGTTCTCTCTGTTTTCTTATAATCCTGTTTTCTAGAAACTTAGTATACTAATAATCCTGTTTTCTATT CTGGTCAGTTTTTGGTTGTTGAAGAAGATGATTCCTATAGAATTATAGCCCAAAGATTTTATTACTATTATTTATTATCA TTACTATATTATTCATGTTTATGTAACATATTTTCAATTTGGCCAATGTTGGTTATTTAATTAAAAGATGACATCTTCAG TGGGAAATCAAGCATATTTGACATTTTTCTAGTTTTCACACTGAAGGGGCCAACTTGTCTGTGCAAAGCTGATTGGGCAT GGTTCAATGCTTCTTGTATCCTGTTCTATGAGATATTCTGTGCCCTTTTGGTTAAATAATGACATTGGACTTTAAGACTT TTGATTTTGTGGGGACAGATTGTGGGGATTTATTTCATGTTCCCTTTGGTGGGGTTGTAACAAAAAGATGGAATCATTTG ATTTGCATTTTGCAATCTCTTGGGTTCATGGTGGAGCCTGCCTAGCCTCTTAATCTGATGGTTTAATTAATGCTGTGTGT TCTCTTTGTGGGGCAGCTGGTATTCTATTTTTGTCTTCTCTCTTATCTGAGTACACATAAGTTTTCAAAGGAGGGCAGGG TTTTTCTTTTTCCTTTTCATTTTAAGTAATTTTTCTTTATATTTGAGAATTTTAAAAATTAAGATGAATGAACTTAGACA TGATGAATCTTTCTATCATTATCATTATCATTATTGAATATTGATTTGTTTCTATAAACATTTCATAGATTTTTTAAAAA ATAATTATTTATCAACCCAAATTCCCAAACTTATCAAAGAAATGATGTCATACTAGGCCTCTCATATTCTAATCTCTGAT GAGTGCCTGAATACAAAAGTTATTTAATTTGGCCCTTGGTAATTTTCATGGACATGATGCCATTTATCTGCACTCTAAAA TCTCACTTTCATTCTGTGCTCTTCAATTTAACCAAACAAAAAATCTGTGCTCTTCAATGAATGAATGGAGAATTTTGTTC TTATCACAAGGAAACACCTGATTGGAACATAAAAGTTAGAACTCTTTCCTGTGGTGTCTTAATAGGTTGTTCTGTTGTGC CAATATATACGTGCATTCTTTATTTAATTGTGAATGGAAACTCGGTTAATTTTCACGTTCTTGAGAGAATTGATTCCGGA AGAAGCTACTAGTTTTGGTGGATAACAAGTGATTTCTAGGAATATCAGTGGATCTAAACATGCTGTCATACTGATAAATT GTTATTAAGAGAAAATCATTGCTTCAGTTCATTATTACCTTGCTGGCTATAGCTTTGAATTTAAAATGTTGCAGTCAAGG TATTCTTTTGCTCACTCACAATTTGATCAATTTGATATCAAAATTGATAGGCAAGGAAAGCACTGCGAGCATTGAAAGGG TTGGTGAAGCTCCAGGCACTGGTGAGAGGTCAAATTGAGAGGAAGAGGACAGCAGAGTGGCTTAAAACAATGCAAGCACT GTTGCGAGCACAGACACGAGCCACTGCAGGAAGGACCCTGCACACCTCATATTCAAGTGCAAAGCAGCCATCTACATGCC AACTCCATTCTTCTGTAAATTGCTTCTTTCATTTGTCTTTCTCCTTTTCAATGGTTTTTTTTTTTTTGGCCTACATAGTT GTTATTCTTTACTTGAAGCTCATTTCTAGTTTTATTGTCTTCAAACTTTGATATTCTTTACTTGAAGTTCGAAGTGGAAA TATCTGTTTTGTTCATCAAAATGCTGATGCACCAATTTTTAAGTTGATACTAAATGGTTGAAATAATATCCAATATAATT TGGTTTTTAACTGTGAAGATTAAGAACCAGTGTATCATATCATATGAATTGGTTGATTGTGTTTGTGCATGTTTGGATAC ATGATGGAAAATGACGGTGAAGCCAAAATCACGGTGGACAGAAGCAACTACCCTTAGCTTTTGTGATTTGGGCACCATGA TTTTGGATTCACCAATCATGTATCCAAACATGCACATAATATGTTTGGATCAGCTAAGCTTTTTCCCATGATTGATTTTG GCTTTGGAATCAAATTCTTGAATTTACCAAACATACACTAAATTTGTTAATTAAAATGCTGTTGTTGCAAATGTACTGTT CTTGATTTGATCATTTAATTTCCCAACAGGGTCCAGCAACACCAGAGAAATTTGAAAGCCCTGTCAAATCTAAGAGCACG AAACATGATCAGCAATCACCTGTACACAAGGTAAGATCATGGCAAGGTTCTTGCCATCTCTTAATCAATAGGGGTGATTT GAATGTATTGTCAACTTATGGAGGCATTTATTGATATCATTGCAGAGAAATGGCTCCAAATCCTGTGTCCTGCTTAGTGG CAATGAACAGGGCCAGTTAGATGAACAATCATGGAAAAAAGTAAGATCACTCGTAAGAACCTACGCCAGGAACGAAGAAA AGGGCGATAGGATGCTTGAAATTGATTCTGGAAAGCCCCACTTCACCTCAAAACGCCGAAACCTCTCTTACTCTAACAGT GAGCCTCTAGGCTCAGAACATTGTTACAGTAAGAGCTTAACCACCACAAAAAGTTCTGAACATAGTTCTTCTTGTGAAGT TCAGTCCCACAACAACAACAACCCACTAAAACCATACGAGGTTGATGAGACTCCATTCTGCACTGCCAGCAACAGTCCCC AATTTTTCTCTGCCACTTCCAAAGATGATGGCTGCAAAAGAAGTCCTTTTAGTACTCCTACAAAGAGTGATGGCTCGAGA AGCTACCTTCGTGGCTATTCCGACTACCCAGGTTACATGGCGTACACCGAGTCATCGAAGGCAAAGGCGAGGTCTCTCAG TGCCCCGAAACAAAGGCCTCAACAATACGAGAGGTCCTGTTCGTCTAGCAGGTACTCGCTCAATGGATTTGAGATGTCAA GATTGGCCGCACAGAAGACTTTGCAAGCAAGCTTTACCAGCAAAGCGTATCCAGGTTCCGGTCGTTTGGACAAGCTTGGA ATGCCTGTGGGGTATAGATTCTGATGTTGAAGTTTCTGTTGAAAGGGTTTTGTTATCAGAGTCTGCCTTCACATCTGATC TTGCTAACATCACTTAGCATTAGAAATCTGTAACCAAGTTCAGAGCACACTGCCAAGACTTAAAATGACTTGATGTTCTA GGACTTAACTTCTCATCTAGTTCTTTAAATCCTTGCACTGTTATCTATATCGGTTGCATAGGAATCTTATTGCTTGGATA TTTTGATGATCTATTAAAAAGTAAATCATTTTCATATGAGTATCTTAATTACTGATTAGTTTGTTGGAATGTTAAAAGTG GATCATTTTTATAGCCTTGAAGTCTGAGGCATTTGTTTATCATTATTTAACATGGACCTTGCACACTCTATGTATGAATT GTGACTTTTATGGTAAGATGTGAAGGCATTTTGACATTGGCTGAATT
CDS sequence (LotjaGi4g1v0221100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAAGCATCGAAGTGGTTACGCGGGATTCTCGGTCTCAAGAAATCAGAACGCAGTTCAAGTTCAACTCCCAAGCC ACCGAAAGAGAAACAACGACGATGGAGCTTCGTCAAATCATACAGAGAAGAACAACAACAACAACATAGCCACCCTCATT CTACCGGTAACTCTCCGGCCACGTTCCAAACGGAACACAGTGACAACAAGCACGCCATCGCAGTCGCTGCGGCCACGGCA GCGGCGGCGGAGGTGGCTGTTGCTGCCGCTCAAGCGGCTGCGGCTGTTGTGAGACTTACAAGCAGCAGCAACAACGTCAG GATCCGTGAAGAATGGGCGGCCGTTAAGATCCAAGCCGCTTTTCGAGGAAGCTTGGCAAGGAAAGCACTGCGAGCATTGA AAGGGTTGGTGAAGCTCCAGGCACTGGTGAGAGGTCAAATTGAGAGGAAGAGGACAGCAGAGTGGCTTAAAACAATGCAA GCACTGTTGCGAGCACAGACACGAGCCACTGCAGGAAGGACCCTGCACACCTCATATTCAAGTGCAAAGCAGCCATCTAC ATGCCAACTCCATTCTTCTGGTCCAGCAACACCAGAGAAATTTGAAAGCCCTGTCAAATCTAAGAGCACGAAACATGATC AGCAATCACCTGTACACAAGAGAAATGGCTCCAAATCCTGTGTCCTGCTTAGTGGCAATGAACAGGGCCAGTTAGATGAA CAATCATGGAAAAAAGTAAGATCACTCGTAAGAACCTACGCCAGGAACGAAGAAAAGGGCGATAGGATGCTTGAAATTGA TTCTGGAAAGCCCCACTTCACCTCAAAACGCCGAAACCTCTCTTACTCTAACAGTGAGCCTCTAGGCTCAGAACATTGTT ACAGTAAGAGCTTAACCACCACAAAAAGTTCTGAACATAGTTCTTCTTGTGAAGTTCAGTCCCACAACAACAACAACCCA CTAAAACCATACGAGGTTGATGAGACTCCATTCTGCACTGCCAGCAACAGTCCCCAATTTTTCTCTGCCACTTCCAAAGA TGATGGCTGCAAAAGAAGTCCTTTTAGTACTCCTACAAAGAGTGATGGCTCGAGAAGCTACCTTCGTGGCTATTCCGACT ACCCAGGTTACATGGCGTACACCGAGTCATCGAAGGCAAAGGCGAGGTCTCTCAGTGCCCCGAAACAAAGGCCTCAACAA TACGAGAGGTCCTGTTCGTCTAGCAGGTACTCGCTCAATGGATTTGAGATGTCAAGATTGGCCGCACAGAAGACTTTGCA AGCAAGCTTTACCAGCAAAGCGTATCCAGGTTCCGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGGTATAGATTCTGA
Protein sequence (LotjaGi4g1v0221100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKASKWLRGILGLKKSERSSSSTPKPPKEKQRRWSFVKSYREEQQQQHSHPHSTGNSPATFQTEHSDNKHAIAVAAATA AAAEVAVAAAQAAAAVVRLTSSSNNVRIREEWAAVKIQAAFRGSLARKALRALKGLVKLQALVRGQIERKRTAEWLKTMQ ALLRAQTRATAGRTLHTSYSSAKQPSTCQLHSSGPATPEKFESPVKSKSTKHDQQSPVHKRNGSKSCVLLSGNEQGQLDE QSWKKVRSLVRTYARNEEKGDRMLEIDSGKPHFTSKRRNLSYSNSEPLGSEHCYSKSLTTTKSSEHSSSCEVQSHNNNNP LKPYEVDETPFCTASNSPQFFSATSKDDGCKRSPFSTPTKSDGSRSYLRGYSDYPGYMAYTESSKAKARSLSAPKQRPQQ YERSCSSSRYSLNGFEMSRLAAQKTLQASFTSKAYPGSGRLDKLGMPVGYRF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 448 | 448 | 9.8E-120 | – | |
| MobiDBLite | 1 | 65 | 65 | - | – | |
| PANTHER | 1 | 448 | 448 | 9.8E-120 | – | |
| MobiDBLite | 22 | 49 | 28 | - | – | |
| MobiDBLite | 50 | 65 | 16 | - | – | |
| SMART | 109 | 131 | 23 | 0.0016 | ||
| ProSiteProfiles | 110 | 138 | 29 | 10.109 | ||
| Gene3D | 111 | 151 | 41 | 6.7E-7 | – | |
| Pfam | 112 | 131 | 20 | 3.6E-5 | ||
| SMART | 132 | 153 | 22 | 320.0 | ||
| ProSiteProfiles | 134 | 161 | 28 | 7.638 | ||
| MobiDBLite | 174 | 196 | 23 | - | – | |
| MobiDBLite | 174 | 226 | 53 | - | – | |
| MobiDBLite | 204 | 219 | 16 | - | – | |
| MobiDBLite | 266 | 293 | 28 | - | – | |
| MobiDBLite | 275 | 293 | 19 | - | – | |
| Pfam | 337 | 413 | 77 | 1.8E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0221100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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