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LotjaGi4g1v0226600.2

Overview

Field Value
Gene ID LotjaGi4g1v0226600
Transcript ID LotjaGi4g1v0226600.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein-L-isoaspartate O-methyltransferase; TAIR: AT3G48330.1 protein-l-isoaspartate methyltransferase 1; Swiss-Prot: sp|Q42539|PIMT1_ARATH Protein-L-isoaspartate O-methyltransferase 1; TrEMBL-Plants: tr|I3S6G7|I3S6G7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0226600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:53600026..53601822) extracted from Lotus japonicus Gifu genome v1.2.

AAAACAAAAGAATCCAAACTAAATGTAATTTTGCAAATAACACAGCAATACTGGTCTGGGAGTGCTGTCAATAGAAACAA AGGGATGGTGGAGAATTTGCAGCAATATGGAGTGATCAAGTCCAGAAAGGTAGCTGAAATAATGGAAACTATTGATAGAG GTTTGTTTGTGCCCAATGGAGCTCAACCTTATGTAGACAGCCCCATGCTGATTGGATACAATGCCACAATATCTGCACCA CATATGCATGCCACCTGTCTTCAGCTGCTGGAGGAGAATTTGCAACCAGGAATGCGCGCTCTTGATGTTGGCTCTGGTAT TGTCCATGAACTATTTATGACTAGTACTCAGGCCATGAACTATGTGTAATTTGTTATTTTTTTATTTATTTTAATGTATT AAAGAGAATTAGAAAATGTGCATGCTAGTTAAAATGTTGGAGTTGCTACGCCATGTTTGATAAGATTGCTTACTAAATTC GACAGTATATTACTAGCTATTAACAGCGGCAAAGAATGTTAGAAGAGAATGGTGATATTTTTTTTTCCTTTTGCGGGATG GAGTTACAGAAGGATGATATGATGTACAACCTTGACTATGTTTGTTGACAAGATAATGGGTTTCTCCTATAGATTTGTAT GCTCCTAAGTTAGTATGGAAAGTTTTAACACCCCCAGATGCGATATACAGAATTAATGATGTCAATTGGACAGGAACTAA TGTTCTCCATATGCTCTGCAATTGATGCTCACAATTTCTATGCTTTGCCTCTTTGCAGGAACGGGGTATCTGACTGCATG CTTTGCCTTGATGGTTGGACCCCAAGGCCGGACTGTTGGTGTGGAACATATTCCAGAGTTAGTATCTTTTTCAATCCAGA ATATTGAAAAAAGTGCTGCAGCCCCACAATTGAAAGATGGATCCCTCTCTGTGTATGTTACTGGTATGGTTTCTATAATT TCTGTGGATCTGTTTTGCTCAACAAGAGTACCGTTCCGTTTACCTATTTGACCATAACAATTAAATCTAGCCCATTTGTC AGTTATGGGGAAGGAAGGCCTAGTAAGGATTAGATACATTTAATTTTAATGAGTCATGGAGACTCGCAAAAGTGTAACCT AATTGGTCGCCTGGTTGGGATTTGTGTGAACTGTGAAGGGATTGAGTCAAGTTGGGTCCGGCTCCCCTAAAATGAGGGGG TAAATTAAGTCATCACACCATTGATTGAGTTGTTTTTATTGACTTTTCAAATTAGATAATCACTATTAATGTTGTGATGA CGTACTTTACCCTCTAAAGTGAGTGGACTCTCTTGAAGGAGCCAAATCCAGTCAACTTAAGCTGGAAGTAAAGTTGATCC ATAAGCATTCTTTATGTTATGGTCTTCCAAAACGTTCATTTGTCCATTTTACAATTGCAAACTCTTACCTCTGGTCCATG GTGATAGCTGTATGGTTGGTTAATCAATGTTTCTTGAGCAGTTAAATACTTGCTTTTTAAGTTGGTTGATCAACAATTTC AAATATTTGTGTAATTGTTGTGTTAACAGATGGAAGGCAGGGTTGGCCGGAGTCTGCTCCTTATGATGCCATTCACGTTG GAGCTGCGGCACCAGAAATTCCCCAAGCACTTATTGACCAGTTGAAGCCGGGTGGTAGAATGGTTATACCCGTTGGAAAC ATATTTCAAGATTTAAAGGTTGTGGATAAGAACTCTGATGGTGCTATCAGTATCCGGACAGAGACTTCTGTTCGATATGT GCCTCTCACAAGCAAAGAAGCTCAACTGCAAGGTTAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0226600.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGGAGAATTTGCAGCAATATGGAGTGATCAAGTCCAGAAAGGTAGCTGAAATAATGGAAACTATTGATAGAGGTTT GTTTGTGCCCAATGGAGCTCAACCTTATGTAGACAGCCCCATGCTGATTGGATACAATGCCACAATATCTGCACCACATA TGCATGCCACCTGTCTTCAGCTGCTGGAGGAGAATTTGCAACCAGGAATGCGCGCTCTTGATGTTGGCTCTGGAACGGGG TATCTGACTGCATGCTTTGCCTTGATGGTTGGACCCCAAGGCCGGACTGTTGGTGTGGAACATATTCCAGAGTTAGTATC TTTTTCAATCCAGAATATTGAAAAAAGTGCTGCAGCCCCACAATTGAAAGATGGATCCCTCTCTGTGTATGTTACTGATG GAAGGCAGGGTTGGCCGGAGTCTGCTCCTTATGATGCCATTCACGTTGGAGCTGCGGCACCAGAAATTCCCCAAGCACTT ATTGACCAGTTGAAGCCGGGTGGTAGAATGGTTATACCCGTTGGAAACATATTTCAAGATTTAAAGGTTGTGGATAAGAA CTCTGATGGTGCTATCAGTATCCGGACAGAGACTTCTGTTCGATATGTGCCTCTCACAAGCAAAGAAGCTCAACTGCAAG GTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0226600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVENLQQYGVIKSRKVAEIMETIDRGLFVPNGAQPYVDSPMLIGYNATISAPHMHATCLQLLEENLQPGMRALDVGSGTG YLTACFALMVGPQGRTVGVEHIPELVSFSIQNIEKSAAAPQLKDGSLSVYVTDGRQGWPESAPYDAIHVGAAAPEIPQAL IDQLKPGGRMVIPVGNIFQDLKVVDKNSDGAISIRTETSVRYVPLTSKEAQLQG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF01135
1 209 209 2.2E-84 –
Gene3D
G3DSA:3.40.50.150
1 213 213 1.4E-78 –
PANTHER
PTHR11579:SF21
1 214 214 1.0E-136 –
PANTHER
PTHR11579
1 214 214 1.0E-136
IPR000682
TIGRFAM
TIGR00080
2 211 210 1.2E-65
IPR000682
SUPERFAMILY
SSF53335
2 180 179 9.69E-39
IPR029063
CDD
cd02440
71 174 104 1.91428E-6 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004719
Molecular function Protein-L-isoaspartate (D-aspartate) O-methyltransferase activity Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester.
Subterm of
GO:0006464
Biological process Cellular protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0226600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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