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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0233600 |
| Transcript ID | LotjaGi4g1v0233600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Poly [ADP]-ribose] polymerase; TAIR: AT5G62520.1 similar to RCD one 5; Swiss-Prot: sp|Q9FJJ3|SRO5_ARATH Probable inactive poly [ADP]-ribose] polymerase SRO5; TrEMBL-Plants: tr|I1MTH3|I1MTH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0233600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:54656452..54660623) extracted from Lotus japonicus Gifu genome v1.2.
TTCCTTTCTTTTCTCTCAAACCAAACAACTAAAATAATCCTCTCACTTTCCTTTCACCTTCTTTCCTTTCACCTTCTTTC CTTTCTCTTTCTTTCTTCTCTAACCAAACACACCATAAATGAAAAGAGTTGCAAAAATTGACCTCTTTAACTTATTGCCC AAGCATATCACGCCACGCACGCATCCAACAATGCTCTTCTTCAAATCCCATATTGCCACAACTTGTTCTTCTTCTTCCAC CGCCTCAACTAACATCTCTTTTCTTTCATATATGGCGGTTTCCGTTGCCGTTATACCTGAAACGACACCACTTTTCGCCG CACCTCCAGAATCACTCACGCTTTTATTCCCGATTACTCTTTTCTTTTCTTCTCCTAGTTTTCCATCCTAGTCACCATCA TTCATCATCATCTTCATTCCTTTTCTGTGTTTTTTTCTATCAACCCTTTTTCTTACTCTCCAAGTTTTCCCTCTTTTGTT CAAACATGACCCCTTACAAATTCAAATTCAATTTCCTCTAGTTCATTCACACACTACTACTCACTCATTCTTTGATTCCT AAAATCCTCTTTCTCTTCTTCTCTTCTTTCTGCCGCCATGGATCCAAGGGGTAACACTTCGTCGCCACCGTTGCCTCGTG ATTTCTCCGGCGACGACACCGACGATTCGATGGCTTCCGATTGCGAGAGCGGAGTTTCCGGCGGCGAGGTGATCGTCCGG GCGGATGTGCGCAGCTTGGAGTCGGTTGGAAGAAGATTCATTGACGGACTTGGTCCTCTCGCTTCGAGAATCCAGGTTGT ATCGATTCGGAGGAATAAATTCCCTACCGTGATTTCGCAAGCGCGTGTTGACTCGTTTCAGATCTTCGCGCGTGCCACCG CCCAGCTCCGTCACGGGAATGCCAACGTCAAGCACGCTTGGTATAGCGTTTCTGGCATGGAGGAGATTCTCGAGATTCTT CAACACGGTTTCGGGCATGACCATCATCGTGGCCTGCGTCTCTCTCCAGAGGATTCTCCTCACCTCAGGCACGTGCCAAT TTCATTATCTTAATTTAATCTAATCATTATGCATTTTTTTTTTTTTACTTTAATTCGTGATTAAATGAGTTAATTACTAG TAATTAGAATATCTTAATTTTGTATCATTATCTTAATTTTATGTAGTGTGTTATGATTTTGAATGTTGGTTTGGTTCTAA GATTTTATTGTTGTTGTTTGGTTTATGTGATGTGGGCTTTATATAGTGTGAGAAGGTCTGTTGCTGACAAAGATGGTTTG AGGCACTTGGTGCTGTGCCGTGTTATCCTGGGAAGGATGGAGGTGGTGTCTCCCGGTTCGGATCAATGCCGGTCGATTTC CGACGAGTATGATTCCGGGGTGGATGATGTTTCGTCCCCGAAGGAGTACTTCATTAGGAGTAACAGGATGAACACACATG TCTTGCCTGAATATGTTTTGAGTTTCAGGATTCCCCCCACAGGTTTGTTTGGTTGGGTGTGTTCTTTGTGTTGGAGTAGC TATTGCTTTATAATTTGTGCTAGTGTTGTCAAAATTCTAATAATTTTTTCGATTTTTGTAGGTCGTGCTGTGAATGTTGC TGCTGCTCGCGAGCCTTCGAGGCCGAAATCCCCTTGGGTTCCATTCCCAGCACTGATTTCAGCGCTGTCCAAGATTTTGC CTCAGCATGATATGGCCATCGTTTTGAAGCTTCAAAAAGATTATAGAGTAAGTGCTTCTGACTTGCTTCTCTGGAGTTTG AGACACTTTTTTTTGTTTTTTGGCTGAAGTTTTTGGTTGTGCTTCCTCTGTTTCTCAGGAAATGAAGATTTCAAGACAGC AAATGATACAAAAGTTGAGAGTGATTGCTGGGGACAAGTTGTTGTTTCAGGTCATTAAATCTTTCAGAGAAAAGTTACAG GTATCCCTTTCTACTGATTTTGATCTTCATTAAGGTTGGGCTTTGTGACGCAATTGTTTGCCTATGATCAAGACCAGACA TACATACTGCTGGTCATGTAGGACAAATTAGAACTGCACTACTTTTTCATCAAAGTTTGTCATACTGTTATGGTTCAAAT TAAATTACACAAAGATAGGATGTCTCTGAAATTTTGGTGCATTCTTACTACATACCCAATAATCCTTTTTTGAGTTATTA TGAGCTAATGATACGTGAATTGGGCAAGAGAAATGGAAAACCTGGTTAGTGATAACAACTTTCTTCAAGTGTTAGATATT GAAGTCTTGAAAAGTGGCCCTAGTTGATATTGTCTACTTCTGAGTGCTTATTGATGTGAGTACTTTTGTTGGTGATCTCT AAATCAATGCGGGCTAGTCAATTTCACTCTCTACTGTACCAGAAAAATCAAAAAATAGAAATCCATATTCATGAAATATG AAATTTGATCTTGATTTAAGTTAGATGTGAATGTGGTTCAATATTCTTGTCTTGTTCCTACTTCTGAATTACTATGGAAA CCCTGAAGTGGACTTTGCTGATGAAATAGAAGTCTTGTTGGAACTATTTCAACATTATTCTTATGAATATGATTTGACTT GCCTATTGTGGGGTACGTGGTTTGTGCTAGTTGAATTTATTTGGTGGAAGTCACAGGCTAGTGGTTTCAAATGCATGCTT GAACTCCGCCCTCTAGAAAGAAATATCAAAAGATGATTCAAAAGAAATATGCTACTGACACTCACTTTTGCACTCTCTTT TATCGGTTAAAATCCACTTAGGGTTCACTAAATTATATAGGCCCCGCCTCTAATATGGTGGGATCTACATCAATTTTAGC CAATAAAAGAGTGTTCAAAAAGAGTGTCGAAATGAGTGTTGACAGCACTTGAAAACATAGCTAGTTTTCATTTGGTCAAG TTGATTTTGTTGTCCGATTTATGTGTAAGAACAATTGTGTGAAGTGTGCTGTTCAGAACAAGAGCTAGCATGTATCATAG GATCACAAGAGTAATATGACAAGTAGTAACATTATCTACGATAATTGCATACTCTATCTTTTATGTTTCACTTTTACTTA TCCCTCTGCTTCATTGGGTTTGTCTGCACATATATAGGTGTTCTATGTAATGGTGACTTTGCTTTTCTTGCAGAAACCAC CCCCTAGCTGTAACAAAGTGAAAGAATGGCAACAGGAAAGCCAGCAACCAACCGCTAGCTGTAACAAAGAGAGAGAATGG CAACCGGAAAGCCAGCAAAGTGGAATAAATAATTCTCTATATTGAGTTCTTTTAGTTTCTTACAAAAGTGCATTATTGTG CTTGAGTTGACACAATAATGCTCATACTAATCATTCGTTGAGGAGGAAAGCACTGTGAGGAGCAATGCTACATTCGAAAC TTTTTTCTGGGTTATACATGTTTTATGATGATGATAATGGTGGTGTACCAGAATAGTCTCTCTATATTTTAGTTGGCTAT AATACTTGGTGGAACAGATTATATATTGGAATAGTTCACTCCCGAATGGAGCATTTATCGTGGACATATTATGTTCTTTA ATATTCATTTTTTAGCTTTTAGTTAACTTGGAGAGAATTTCCAATATACTTGGAAACAAATCCTTTCGCATCTTTTATTT TCAATCTTCGTAATAACAAAAACATATACGTGCAATAGATTATTCATTATTATATGGAGATAGTATTTAGATTTTAGACA TACAATCCATAGAAAATAATGAAGTAGGCGAAACAGTAGAATCAAAGTTACTAGCTACCAACAATCAAACTAACAAAAAC TGAAATTGTTATTTGTTTACATTTTGTACTAACCCCACAAGTGAGACTATAAAAGTATGAATATGATAAAGTCCTCATGA GAGTAGGATTGTGGACTATGTAGATGGCATACTGGTTGTCGCAATAGAGAACAGCAAATTGATCAGAAGCTAAAGTAGTT AGAGCATGATATTTGGCTTTAAAGAAGGAACATGATATAGTAGATTTACAGGGCAATAGAAACACAGTATCTAGTGATGG ATTTCTCCGAATCCAAACAGGATGCCTAATTGGAGTCAATAAAATCATCAATTTTGAGGTCAGATGATGTAGAGAAAAAC AAACCTTTACCCGGAAAGACCAAAAGAGCTAGTCAACTATTAAGTACTAGTCAACCAAGGCAATATCAAGTCAAGTTGTA GTGAGATATAAG
CDS sequence (LotjaGi4g1v0233600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCAAGGGGTAACACTTCGTCGCCACCGTTGCCTCGTGATTTCTCCGGCGACGACACCGACGATTCGATGGCTTC CGATTGCGAGAGCGGAGTTTCCGGCGGCGAGGTGATCGTCCGGGCGGATGTGCGCAGCTTGGAGTCGGTTGGAAGAAGAT TCATTGACGGACTTGGTCCTCTCGCTTCGAGAATCCAGGTTGTATCGATTCGGAGGAATAAATTCCCTACCGTGATTTCG CAAGCGCGTGTTGACTCGTTTCAGATCTTCGCGCGTGCCACCGCCCAGCTCCGTCACGGGAATGCCAACGTCAAGCACGC TTGGTATAGCGTTTCTGGCATGGAGGAGATTCTCGAGATTCTTCAACACGGTTTCGGGCATGACCATCATCGTGGCCTGC GTCTCTCTCCAGAGGATTCTCCTCACCTCAGTGTGAGAAGGTCTGTTGCTGACAAAGATGGTTTGAGGCACTTGGTGCTG TGCCGTGTTATCCTGGGAAGGATGGAGGTGGTGTCTCCCGGTTCGGATCAATGCCGGTCGATTTCCGACGAGTATGATTC CGGGGTGGATGATGTTTCGTCCCCGAAGGAGTACTTCATTAGGAGTAACAGGATGAACACACATGTCTTGCCTGAATATG TTTTGAGTTTCAGGATTCCCCCCACAGGTCGTGCTGTGAATGTTGCTGCTGCTCGCGAGCCTTCGAGGCCGAAATCCCCT TGGGTTCCATTCCCAGCACTGATTTCAGCGCTGTCCAAGATTTTGCCTCAGCATGATATGGCCATCGTTTTGAAGCTTCA AAAAGATTATAGAGAAATGAAGATTTCAAGACAGCAAATGATACAAAAGTTGAGAGTGATTGCTGGGGACAAGTTGTTGT TTCAGGTCATTAAATCTTTCAGAGAAAAGTTACAGAAACCACCCCCTAGCTGTAACAAAGTGAAAGAATGGCAACAGGAA AGCCAGCAACCAACCGCTAGCTGTAACAAAGAGAGAGAATGGCAACCGGAAAGCCAGCAAAGTGGAATAAATAATTCTCT ATATTGA
Protein sequence (LotjaGi4g1v0233600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPRGNTSSPPLPRDFSGDDTDDSMASDCESGVSGGEVIVRADVRSLESVGRRFIDGLGPLASRIQVVSIRRNKFPTVIS QARVDSFQIFARATAQLRHGNANVKHAWYSVSGMEEILEILQHGFGHDHHRGLRLSPEDSPHLSVRRSVADKDGLRHLVL CRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFRIPPTGRAVNVAAAREPSRPKSP WVPFPALISALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLLFQVIKSFREKLQKPPPSCNKVKEWQQE SQQPTASCNKEREWQPESQQSGINNSLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 32 | 32 | - | – | |
| PANTHER | 21 | 315 | 295 | 3.2E-109 | – | |
| PANTHER | 21 | 315 | 295 | 3.2E-109 | – | |
| ProSiteProfiles | 24 | 239 | 216 | 21.143 | ||
| Gene3D | 40 | 219 | 180 | 3.1E-15 | – | |
| SUPERFAMILY | 81 | 220 | 140 | 1.25E-12 | – | |
| ProSiteProfiles | 235 | 306 | 72 | 30.564 | – | |
| Pfam | 236 | 301 | 66 | 5.1E-24 | ||
| MobiDBLite | 305 | 348 | 44 | - | – | |
| MobiDBLite | 312 | 348 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD+ ADP-ribosyltransferase activity | Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor. |
Expression pattern of LotjaGi4g1v0233600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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