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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0238500 |
| Transcript ID | LotjaGi4g1v0238500.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT5G62890.1 Xanthine/uracil permease family protein; Swiss-Prot: sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6; TrEMBL-Plants: tr|A0A151SN55|A0A151SN55_CAJCA Nucleobase-ascorbate transporter 6; Found in the gene: LotjaGi4g1v0238500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:55448456..55453216) extracted from Lotus japonicus Gifu genome v1.2.
CTGATGGCAGGGGGCGGTGGCGGAGGAGCTCCGGCGCCGAAGGCTGATGAGCCACAGCCACATCCACCGAAGGATCAGCT ACCCAATGTTTCTTACTGCATTACAAGCCCTCCTCCATGGCGTGAGTTTGATTCCTTTTCTGAGCACTTTGTTGTTTTGG AACCTGATTCCTCTTGAAGCTTAACTCATACACTGGAATATTGAAGAGTGTTTATTATTGTAACTTCATTTATTTGCGCT TGATTACTTTTTATCCATTTGTCTAAAGTGGCTTTCTATTAAAATCTTTCCTTATTATGAAAAAGATAAGATTCTATTTT TGTTAATTAACTCTTAAGCTGATTATAATTCTATGTTTGGGGGAGGGGGTACTGAATAGGGGAAAAAGGGTTTTGTATGG TTTAATTCACTGGTCATGCCTCATAAATTTTCGCTTTCAAAGTAATAATAGGGGAAATAAGGGTTCTGGTTTATGCAAAT GGCATGATTAGATTTTGAACCAATTTGAAGTACTAATTTCAAAGTAATAATTGAAGTCCTGTTTCCAATTTAGTGAGATT CTTTTGAACTTCTTGCTTTCCCTTCTGTTGTATTTCTACATTCATATTGAGGTTCTTGCCGATTATTTCCTGATTTGGAT TGGGAAAACTACTTCACATTCCATTTTCATAAACTCTGTCCCCTGACCTGATGTAATCATTTTAGTAGTTTACTAATTTA ATAATAAGATTTTTTTTAAATATATTATTGAATTATTGAATTTTGGAACATTTTACGATACCGCTGAGTTTATGTGGTCA ACAACTTCTGATTGAACAATCAACAATGTCGATTTCATGGTTAAAACTAAATACCATTTCTGGTCATCATACTAAGTAGT TTGTATTTTAAAATTTAAGGACCCCTCTTCTTCCTTGGGCTTTATGTTGTTGAAAATATGACTAAGGCGTCTGCTTTTCT TTTTCTTTCCTAATTTGATGAGAAACTTGGGGGCATTCTGATGCAGCTGAGGCCATACTTCTTGGTTTTCAACATTATCT TGTGATGCTCGGCACAACTGTGCTAATTCCAACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGTAAGCATTAACCAAT TAAATTCACTCAAAGAAACCATTTTTGATGTGTAATGATTTTTTTCTGAGGGATATCTGATAATCTGATTGAAGCTGCAC TTTTCTCCTGCCAAAAATTATTTTTTATTAAAAAAATAGAAGAATTGAAAGTCCATTGTTTTGCAGGATGAGAAGGCCAA AGTTATCCAGACACTACTATTTGTGGCTGGAATCAACACATTACTGCAATCTATGTTTGGAACTCGTTTGCCGGCTGTAA TTGGCGGGTCATATACCTATGTTCCAACAACAATCTCAATTATTCTTGCTGGTCGGTTCAGTGATGAGCCAGATCCTATA GAGGTCACAACAGTTCTTGCTATAAATTGTGCATTGTTCATATGCTTGCTCTGTTAATTTACATTGTAAGAAAATGAGAT GCAAGCTAAACAAAGATTATCATATGAATTGTTATTACTTTCAATCCAGCCATTGTATTTTTAATTGTCATCAGAAAAAC TAACAACCATGCTTTCAATTGCATGGATTTACCAATGAGGGTTCGGTTAATTGGTAGGATAGAACTATGTCAACGCAGAA GTCTTGGGTTGAATTCCTAGTTTCCTTGTAGCATGCCTTGACCTAATGGCCTTGGAATGGGGCAATTTAAGAGGGGAGGG GGAAATTGAATTCAAGAAGCAGAATATGACTTAGATTCTGGTTACTTGATGGAATTGATTAGTTGCTTTTTTTTGGCGTA CATGAACTGTTTGATCACTTTCTTCTCCTTCTTTTTGGCTTTGTTTTTTCCCTTGTAATCAGAAATTCAAGAGGATAATG CGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACCCTTCAAATAGTACTGGGCTTTAGTGGTCTGTGGCGCAATGTTGC AAGGTTGGTCTCAAGTTCTTAGTAAGTTGTTGTGTTGTACTTCACATGTCTGTATGTATGGCATGAAAATGTCTAAGCAA AAGTTTAAACTTTATATGAATCTCTTTGCCACATATGCTCGTTGTCAGTTGTTACTCCAATCTGAAGTGATGTTTAGAGT TCATCTAATGCACTTGAGTGATTTATGCAATGGAGTTTGTATTTGACTATAATTCCAGAATTTGAAAAGGTTGAGTATAA ATTTTCCCAAGTGACCTAAGTTCAACTTCTTTCTTCAGGTTCTTAAGTCCACTTTCAGTGGTTCCTTTGGTATCTCTTGT TGGTTTTGGACTGTACGAGTTAGGCTTTCCTGGGGTAAGCCTCATGTTACAAATTTAAGTTGCTCGTGTTCAAAGTTAAT TGATAAAAATAATTCATTATTGATGCCTGGCTTGGGTGCAGGTTGCTAAATGTGTAGAGATAGGACTGCCGGAGCTTATA ATTCTAGTATTTGTTTCACAGGTAGATTTCTTAAGCTGTCACAAACCCAGACTGATGATTTCTGTGGAAGTGAGTTTGTT ATTCACAGTTAATGGTTGTTCTGCAGTACGTACCCCATGCACTACATTCAGGAAAGCATGTCTTTGACCGTTTTGCTGTT CTAATTACAATTGCGATTGTCTGGTTATATGCTTATATCCTCACTGTTGGGGGTGCCTATAACCATGCTGCACGTAAAAC ACAGACAACCTGCCGCACTGATCGTGCTGGCTTAATCGATGCTGCCCCATGGTTAGTTGGAAATTCATTGACTGTTTACT CTCAAATGGTTTTTTTATTACAAATACCTGATATCCTTAAATAGTGGCATGCTATCTCACTATAACATTTTATGATTTGA GTTTTTTTATCATTTTATGTCTTAATAATTGATTCGTAAAATTTAAAATTTATAGAGGGGTATTATGGGGATTTTTTTCT TGTGAATTCCATTGGAGTATACTGTTTTTGTGAGTGATGCTTTGTGGACATGTCACATGTGGTTAATGGAGAGATTTATC TTAGTTGATTCCATCAAATTTCACATTTGAGTTTCAAATGTGAAGAACCTCTTGATGCTTTGACTTTGATTTGTCCATCA CCCATTGGGTTACTTTTTTTTCCTTCCTCTATTCTGTTGTCAAGATAGTAGTTTCTTATTCAGTGAGATTTTTGGTTTGC AGGATACGAGTTCCGTATCCATTCCAATGGGGAGCACCTTCATTTGATGCAGGTGAGGCCTTTGCCATGATGATGGCATC CTTTGTTGCTCTTGTAGAGGTAATTTCTTTCTTTAGATCTTCTCTATTTCTTTTTAAGTTTGAATGAGAACTCTTTCCTG CAATTGATATGTAATTATACTGAAATTCAGCCTGTCGCATAATAATGTTGCTATGGCCTTTATACTTGTTCATGAACTGA GAAGTAGTGTGATCTGCAGTTTCTCATTTGTATTTTCATTTAGTAGTACTACTTCACTAGATTTAAGTTATAAACTCATG TTTTATTTTTTACAAGCAGTCCAGTGGAGCTTTTACTGCTGTTTACCGATTTGCAAGTGCAACACCATTACCCCCATCTA TTCTTAGTCGGGGTATTGGTTGGCAGGTACAATAATAGCTAGTACTTTTAAATTTGCATGTCTTTGATTGAAATTTATTG AATTTATAAATAATAGTGGTTTAAAGCCAAAATCGATGATACTAATGGCTGCGCATTGTCTCGTTCTTCAGGGAGTTGGC ATACTGTTATCAGGATTGTTTGGAACCGGCAATGGATCCTCTGTATCTGTGTAAGACTGAAATCATTCTGTTTCTATACT CTGCTTCTATTAAGAGGAAACAACTTCCATGTTGATAAAAGGTATTTGGTTGGTTTCCTTGTAGAGAGAATGCTGGTCTT TTGGCTTTGACTCGTGTTGGCAGTCGAAGAGTGGTGCAAATAGCTGCTGGGTTTATGATCTTCTTTTCAATTCTAGGTGA GTTGAAGTATGGAGCTAAGTTCAATGTTTGTAATTTGAATATCTACTTTGCCTTAACATTTCTTCTGTTCAACACCACCG ATTTTTTCTTCATTGTGTAGGGAAATTCGGAGCAGTTTTTGCCTCCATTCCACCTCCCATGATTGCTGCACTGTATTGCT TGTTTTTTGGTTATGTTGGTATGTCTGGTTTAAGTTATATTCATGAAAACATATTCAGACTTTTGATTAAATTTGATATT TACAATACACAGCATGTAATATTTTGCTTTCATTCATCATTAGGAGCTGGAGGTCTAAGTTTTCTTCAATTCTGCAACCT CAATAGTTTCAGAACAAAGTTCGTTTTAGGTTTCTCTATCTTCCTGGGCTTGTCTATTCCACAGTACTTCAACGAGTACA CAGCAATTAATGGTTATGGTCCAGTTCACACAGGAGCAAGATGGGTATGGAACTATAAATATGATATATAGAACCTTGGA GTTGTTCTTAGCTTTTGTGAGGAGTCCACTTACATTACACTGCATTTTTATGTGTGTTGCAGTTCAATGATATAGTCAAT GTACCATTCCAATCAAAAGCATTTGTTGCTGGGGTTGTGGCGTATTTCTTGGATAACACACTGCATAAGAAGGAATCTGC TATTAGGAAAGACAGAGGAAAACATTGGTGGGACAAGTACCGGTCCTTCAAGACTGACACAAGAAGTGAGGAGTTCTATT CACTGCCTTTCAATCTGAACAAGTACTTCCCATCTGTGTAA
CDS sequence (LotjaGi4g1v0238500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGGGGCGGTGGCGGAGGAGCTCCGGCGCCGAAGGCTGATGAGCCACAGCCACATCCACCGAAGGATCAGCTACC CAATGTTTCTTACTGCATTACAAGCCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGC TCGGCACAACTGTGCTAATTCCAACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGATGAGAAGGCCAAAGTTATCCAG ACACTACTATTTGTGGCTGGAATCAACACATTACTGCAATCTATGTTTGGAACTCGTTTGCCGGCTGTAATTGGCGGGTC ATATACCTATGTTCCAACAACAATCTCAATTATTCTTGCTGGTCGGTTCAGTGATGAGCCAGATCCTATAGAGAAATTCA AGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACCCTTCAAATAGTACTGGGCTTTAGTGGTCTGTGG CGCAATGTTGCAAGGTTCTTAAGTCCACTTTCAGTGGTTCCTTTGGTATCTCTTGTTGGTTTTGGACTGTACGAGTTAGG CTTTCCTGGGGTTGCTAAATGTGTAGAGATAGGACTGCCGGAGCTTATAATTCTAGTATTTGTTTCACAGTACGTACCCC ATGCACTACATTCAGGAAAGCATGTCTTTGACCGTTTTGCTGTTCTAATTACAATTGCGATTGTCTGGTTATATGCTTAT ATCCTCACTGTTGGGGGTGCCTATAACCATGCTGCACGTAAAACACAGACAACCTGCCGCACTGATCGTGCTGGCTTAAT CGATGCTGCCCCATGGATACGAGTTCCGTATCCATTCCAATGGGGAGCACCTTCATTTGATGCAGGTGAGGCCTTTGCCA TGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTTACTGCTGTTTACCGATTTGCAAGTGCAACACCA TTACCCCCATCTATTCTTAGTCGGGGTATTGGTTGGCAGGGAGTTGGCATACTGTTATCAGGATTGTTTGGAACCGGCAA TGGATCCTCTGTATCTGTAAGAGTGGTGCAAATAGCTGCTGGGTTTATGATCTTCTTTTCAATTCTAGGGAAATTCGGAG CAGTTTTTGCCTCCATTCCACCTCCCATGATTGCTGCACTGTATTGCTTGTTTTTTGGTTATGTTGGAGCTGGAGGTCTA AGTTTTCTTCAATTCTGCAACCTCAATAGTTTCAGAACAAAGTTCGTTTTAGGTTTCTCTATCTTCCTGGGCTTGTCTAT TCCACAGTACTTCAACGAGTACACAGCAATTAATGGTTATGGTCCAGTTCACACAGGAGCAAGATGGTTCAATGATATAG TCAATGTACCATTCCAATCAAAAGCATTTGTTGCTGGGGTTGTGGCGTATTTCTTGGATAACACACTGCATAAGAAGGAA TCTGCTATTAGGAAAGACAGAGGAAAACATTGGTGGGACAAGTACCGGTCCTTCAAGACTGACACAAGAAGTGAGGAGTT CTATTCACTGCCTTTCAATCTGAACAAGTACTTCCCATCTGTGTAA
Protein sequence (LotjaGi4g1v0238500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGGGGAPAPKADEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNDEKAKVIQ TLLFVAGINTLLQSMFGTRLPAVIGGSYTYVPTTISIILAGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLW RNVARFLSPLSVVPLVSLVGFGLYELGFPGVAKCVEIGLPELIILVFVSQYVPHALHSGKHVFDRFAVLITIAIVWLYAY ILTVGGAYNHAARKTQTTCRTDRAGLIDAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFTAVYRFASATP LPPSILSRGIGWQGVGILLSGLFGTGNGSSVSVRVVQIAAGFMIFFSILGKFGAVFASIPPPMIAALYCLFFGYVGAGGL SFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAINGYGPVHTGARWFNDIVNVPFQSKAFVAGVVAYFLDNTLHKKE SAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 46 | 46 | - | – | |
| PANTHER | 4 | 521 | 518 | 0.0 | – | |
| PANTHER | 4 | 521 | 518 | 0.0 | – | |
| Pfam | 41 | 431 | 391 | 1.2E-55 | ||
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 47 | 66 | 20 | - | – | |
| Phobius | 67 | 77 | 11 | - | – | |
| TMHMM | 78 | 97 | 20 | - | – | |
| Phobius | 78 | 96 | 19 | - | – | |
| Phobius | 97 | 101 | 5 | - | – | |
| TMHMM | 102 | 121 | 20 | - | – | |
| Phobius | 102 | 121 | 20 | - | – | |
| Phobius | 122 | 141 | 20 | - | – | |
| Phobius | 142 | 160 | 19 | - | – | |
| TMHMM | 142 | 160 | 19 | - | – | |
| Phobius | 161 | 165 | 5 | - | – | |
| Phobius | 166 | 187 | 22 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 188 | 193 | 6 | - | – | |
| Phobius | 194 | 214 | 21 | - | – | |
| TMHMM | 197 | 216 | 20 | - | – | |
| Phobius | 215 | 225 | 11 | - | – | |
| Phobius | 226 | 248 | 23 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 249 | 290 | 42 | - | – | |
| Phobius | 291 | 313 | 23 | - | – | |
| TMHMM | 292 | 314 | 23 | - | – | |
| Phobius | 314 | 324 | 11 | - | – | |
| Phobius | 325 | 343 | 19 | - | – | |
| TMHMM | 329 | 351 | 23 | - | – | |
| Phobius | 344 | 354 | 11 | - | – | |
| Phobius | 355 | 377 | 23 | - | – | |
| TMHMM | 358 | 380 | 23 | - | – | |
| Phobius | 378 | 382 | 5 | - | – | |
| Phobius | 383 | 403 | 21 | - | – | |
| TMHMM | 384 | 403 | 20 | - | – | |
| Phobius | 404 | 414 | 11 | - | – | |
| Phobius | 415 | 431 | 17 | - | – | |
| TMHMM | 415 | 437 | 23 | - | – | |
| Phobius | 432 | 521 | 90 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0238500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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