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LotjaGi4g1v0238600.1

Overview

Field Value
Gene ID LotjaGi4g1v0238600
Transcript ID LotjaGi4g1v0238600.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description WAT1-related protein; TAIR: AT5G40240.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240; TrEMBL-Plants: tr|G7JNU3|G7JNU3_MEDTR WAT1-related protein; Found in the gene: LotjaGi4g1v0238600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:55470851..55479693) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTTTTTTCAACTCGTGTCTATTTTGTTCTATCATCACTTCCTCATGCGAAAAGTAGGTGCCAATGCAATGGCAATGC TATAGTCAGTCGTACAGGAAAGGAAAATATCTGAATCCTTGCTTTGTGGATGGGGGGGTAGCTACCAGTATTACCTACTG AGTCAACAACACTCAAGACTTTAATTGCTTAGTTTTATTTCAATTTTCAGTATTGAAATCTCTTAATACCCAATTCAGTG TCCAAAGTATCTGTGTAGAAAGATCAAATGGGAGTAAGAAGCTATTTGATGGAATCAGCTCCATTTGCAGCCATGGTGAT TGTGGAGTTCCTCGATGTGGGATTAACCACATTGAGCAAAGCAGCCATGTCTAGAGGAATGAGCCACTTTGTCTTTGTTG TCTACTCCAATGCTCTTGCCACTTTGATCCTCCTCCCTTCCTCTTTCCTCATCAACAGGTCTCATTACCTTCTTCTCACT CTTCCTCCTCAGTCAGTCCTCACTATCATCATCAATTTTCCATTCCTCTTGTTTGCAGAACAACAAGACCACCCCTTTCT TTCTCGCTTCTCAGCAAATTCTTCCTCCTTTCACTTGTTGGGTATGTAACTGTGTATGCAATTGCATTATTTATATATAT TGTTCTTAATCCTTTATGTGGTAGGAAAAAAAGTCAACTGCACTGAACAGAAATGAAGAACCTTGTTCATTTTGTGCAGC ATAACTGTGATGCAGAATTGTGTGTTCACTGGCGTAAACTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGAC TCCAGCAATCACTTTTGTGCTAGCCATCATCTTTAGGTAATTGGGTTTTTATTTGTATAGATAAATTGTTCTCCAAACAT GTTGTAAGATAGAGTTTACACTTATAGCTTGGGTTTTATCAAATTTATGTTTGTATTTAGGTTATTAGGACAAGGTAAAC TTAGAATAGTGCATAACTTATTGGATTATTGGATTACTTTACTTCCTTAAAAACCCTTCTAGGATGGAGAAGTTGGACAT TAGAAGCTCAGTAAGCCAAATCAAAATTGTGGGCACAGTGCTATCAATCTCAGGAGCATTACTTGTTACCCTTTACAAGG GCGCTCCCATTGGCAGCTTCAAAATTCAACTCACTCCGTTGGAAACGTTCCCATTTCTGTTGGCAGAAACCAGTAACTGG GTCATTGGGGGGCTCTTCTTTGCTGCTGCATCTTTATCTCTTGCGCTCTGGAATATTGCTCAGGTAAGTGAGATGCCTTT GATTGATTAGATAGACTACATGACTTAGTAGATCTTCAACTCTACTGATAATGAATGAGAAATTGACAATGTGTCTGTAT AATTTGGTTGAACATGTTTGCAGGCAGCAATTCTTAAAGGATATCCTGCTCAGTTGACTATAGTAGCTTTTTACTGCTTG TTTGGAACGGTCCAATGTGCAATACTTTCTCTGATTGCAGTCAGAGATACAAATGCCTGGATTATTACACCTGGCATTGA GCTCATCTCCATATTCTATTCAGTAAGCACAAAAATAGCAACCAAAATAAAAACTAAGAAAGAAACAACTTGAAGTTTTG ACTCATCGAGGGTTTATTGCAAAAGCTAATTCATTTATGAAAAACGATATTGCAGGCAATTTTCGGAAGTGTGGTGACAT TTTCTGTACTGACGTGGTGTATAAATAGGAAAGGACCTGTATTTGTTGCCATGTTCAAGCCTGTGGGGATTGCCGTTGCT GCGTTTATGAGTTCTTTCTTCCTTGGTGATACACTGCATGTTGGCAGGTAATTCTCACTTTGAAAATATCCTTTGCTATG TTCACTCATGATGGGAATTTCTTGTCAAATGTCAAGTTGTCAACAATAGAATGCATTAAGTGTTAGAAATGTAGTTGCAT AGAAAAGATGCAACACAAACTACACAATGGCATCACCACACTCCTTTGATTCCACCGACAGCTCTCACTGATTCTGTGTT GTGTTTGAAATTTTAGTGTAACTAACATTTCTCTCTTTCTTTTAACACTCCCAGTGTCATTGGCATTCTGTGTGGTGTTT GAAATTTTAGTGTAACTAACATTTCTCTCTTTCTTTTAACACTCCCAGTGTCATTGGCGCAGTAGTGATCGCCATCGGAT TTTACAGTGCTGTGGGCACAATCCAAAGAGACAAATGTGAAAAGCCTCGAAGCTGATAGACTCTCATCCCCGTCACAGAC AAGCCCTCTACTAGAATCGCCATGAAAAGCAACCATTGACAGGAGTATATTAGTAATCTAGTCAATATATTAAAGTGAAC AGACACCAGATATGAAATTCTTAAGAGTTGTGTTTTGTATTCCTTGCTCTGGGCAAGTATATAAGATACCACCACATTGG TGAAAGTAATGGAAACTCTTTACATTGCTCATTTGCCCCCAAAATTCAATAACGGAAGATAAATAAGTGTGAATCCTGCT TAGCTATCTGTCATTCCTTTCAAAATGTGGAATAACCAGTTCCCAATAAGTTAAAGCACAAAAAAGAAACATTACATAAC TCCCAATACCATGTCAGGACATAATCTAACAAAAAAACTCAAGTCAAGCCTACCCAGCTGCAACTTCTTTGACCGGACAC TGCATGAAACAGCGATCTACCTGTAGAATCTATCTACATTAAGATCCAGGTCATGACTTAAGATCATCAGACATTGCGGA TGGAATGCAGTGTGTTGCAAGAATGTCTAAAGTAGCTGCTTTTGCAGTCTTTGTGCGAAGGACCACTATCTGCATAGAAG ACGATTAGTTAATAAAGGGCCTAATTTCACGTTCGCATAAGCACACAAAACAGAGTGAGGGATAAAGAAGGCACCTGATC ATATTCTAGATTAAATTTTAGATATTCATCACGACAGCTCTCTACCATAGCGGCCAAGCTTTTGAGATTTTTCACAGGTT TACCATTGAAAGCGAGGACCTTCACAAATACACAGAATAGAAGGCAGTAAATTAAGTGGTTAAGCCAATAAAGTTATCAG CAAGGAAAGCAATAATATGAAAACCATTATCAACCTGAGTGTTAACAATATCTTCATATCCAATGTTGATATCAGCCACC AGCACCTTGAATGTGTCAAAAAAAAAGAGATATCAGACTTGATAAGACACCTGAGACAAACAGAAGAAGGAAAAATTAAT AGAGAGACTTTACCTGAGAGATCACAACAAGTTGTTCATCTGGTGATTGTGGCATTGAATGCAGCAGTTTATCCAAAAGC TTGACTGGAGCTTCAAACTCATAATCTTTTCCATACTGTTCATACATGACAAAATGAGTTGGAAAAGAATGGCTCCACAA GAAAGCATAGCAAATGGACGTTGTATTAATAAATTTACAAATTAATGCCAAAAGTACAGCAAATCATAAAGTTACAAGCT ACATGGTGAAATTATATTAGCCATGGCAACCATGACCCAAGAGGGCCAAGAAGGGGGTAAATTGGGTGATTACAAATTTG AAACCAACTTTGGAGCTATATCATATCATATACACAGCTCAGGTAGTGACACCTTATCATGGTAGTCATAACCCCAATTA ATTGCACAATCCTATGACTACGGAATTACAGTGCATCTGGGCAAATTATAATCAGTCATACAATCCTTCTTTGGCTATAT CAGACCATAATCCTGATTTTTTTGAAAGAGATCATAATCCTGATTAAAACCACATAATCACACATCAATTGCGATTATGT GATTAAGCTCTGCCCATGTGATGCAGGTTTGTCCCGTTTCCTAAATGCAACCCGGTCTGCAAAAACCCTTTTTTTTGCAA TTGAGCCCAACCCCCCCCCCCCACCACCCCACTACACCAACGGCGCTCCGACATCATCGACGAGGCTCCTCCACCGGCAA TGAAGCTCTGATCGTGAAGCTACTCTCCGGCCTCTTCCCTATTTTAGCTTTGATCCCTGTTTTAATATGGCTTCTCCTCA TGATGGCAGTCAGTCAAGTGGTGCTTCTGGGACTGTGGCTGGTACCGAAGATGGCAGTTTTATGAGTTATACTTTATGAC TTACAAGTTATGAGTACAACTTTATTTAAGTGTTTCTAGTTACTTAATGTGCTTTTAGTATTATTATTTAAGCTGCAGAT AGGAATTTTGCTAAACCTTATGATTATGCGATTTACAATTAACATCCTCTTCCCGATTAAAGGCATAACCCTGATTTTGA GTACCTTGCATGAGTTGCACCTAAAAGTGAAACCTTAACCACTAGACAGAGTAGACTTATATTAGATTAATACATGAAGT TATCTACTGAACTCATCATTTTCCCATATAATCAACTTAACCACAGGCTCCAACTTTCATACAGGACCACATCACTTGCC TAGAGCCCATTACACACTTAAATACAGCAGATAGCAGAACATAATCTATATTGCAATAAAAACTGAACCATTTCGATTTT CCATGAAAACCCAAGATAAATTCACCAATCACTAGCAAAATTCACTATATCACTACAGTATAAAAAATGTAAATATCAGA AATAATGTGAAACTTCTAAAGTCTAAACATCTCAATAACCTCCTTAGAATAATGATCATGTATTCATGTATTAGGATTCC TGCAGCAATAATGAAAAATTTCCATTTCACACAGATTATGTTTGCCAAGAATACAAGTATCAGTTTATCATGTATTTGAA TACAACTTCGAGGAAGACACATAGAAAAACAATTTATATTAAAAAAGAGTAGTAACAAAATCAATGGTATCACCCAGACA CTAAATGTTATCAAAGCGTAGGGGAATGGTAGGTTAAACACAAACCTCCGAACGAAGATAAGGAACTGAAACAGCTGAAA AAACAAATCCTGCAATAATATAATACGAGGGAGGCTTGCCCTTGCTGTGTGCTGGAATAAGCCTTCTATGGCTATTGAGT TTAACGTCAAATGTTAAAACATCAGAATTCCGCAATACTTTGATCACTGCATTATCACCAGTATATTTCTGGGATATGAG ATAACTGAAACCAATGCGCTCTCCATGACGAAAGGGAACTGAAAAGAACACCAGGAGTAAAAAGCGTTATACAACAGACT ATGAAGCTCATGCTATGTTTAATGCTGTCGACAGGAGACGTGGTTAATTACCCTAGGTCTCACTTTTGCCACTAAAACAC ATACAGAAAACAGTGCACCAAGCACATTAATCTAGACACCTAGCTGATTTTAGATATAGGACCAATAAAACAAATCTATC TTGATAGTTGCTGTCAAACTGCACCTAAACAAAAATAAGCTACAAAGAATGCATGTATAAAGAAACCGAAGGAAAACCGC TCACCTGTTCCATCATTGGCAATATTAACCCCATCAAAGCTAAGAATAACATCTGATGGTTTCAAAACCTTAGATTCAGG AGCAGTAGGATCAATTCTTCTAATACGCACACCTTTCTGATCAGATCTCATGCCCATTGACTTTCGTAGATCAGGATTTT CCATTTTCTGCCACTCAACCCCAAGAATAGGGAAACCTAACAGCATATTAAAAAGGAGAAGTCTAAGCAGATAAAACTTC AATAATATTAAATTTTACAATGCTCAGATAACAGCTTTGGAAGTGAAATATACATCTTAGTTCACAGCAACCACATTACC AGTATAACTCCCATTCTTCTCATAATCACGGATGAAATGCATGATAACTGGCGTCGGAATGACATAACCTATATTCTCCA CATCTTCATGCTTAAGTGACTGAAATGCAATCCCCACACAGTTTCCTTTATCATTAAATGCAGGCCCACCAGAATTGCCA GAATTTATAGCAGCATCTATCTGCAAAAACGACCTTGATGAAGGGAAACCATGATAGGATGCACAGACCATAACAAAATG ATAAAGGTTGAAGGGATCAATGATTCCAGCCTAACCTGTAAACCTAGAAGCTCAGTGGAACCATGGACATACGATAGAAT CTCAATGCGTGAAACAACACCGCTGGTAACAGAGATGGTGTCTCCGCCAATTGGGTAGCCCACAACAGTGACTGCATCTT GAAGTGTGGGCAAATCCCCAAACTCTACAGGAGACATCCCTTGCCAGAACTCATCATCATCAACTGTAAGCAGGGCTGCA AAAGTGAAATAAAATGCATGACATAGAACTCATATTAGAAAGTTCAGCAAAAATTGTACTTTGTGATACTGATAGGTATT TAATAGAATAATAGTTAGTTATTTGGAATAATGAACAAGGCATGTTGCCTATATATAGAATGAGGGGTTAAGGGGGTTAG TTATTTTGAGAGAATCGGGGCCTTTGGGCCTTAGGAGGTGCAGATCCTAAATGTTCTGAATTGTAAGGGTGCCCTACCTT TGTAATTTGGATTAATCCTTATTTTCTTCTAAAACGATACCTGCTTCTATCAAATACTTTATACAGTCAATTAGTAATTC TATGACAAACCCCACCCCCCAAAAATATTCTCGGCCTAAATCTACTATCATTTATATATCATATATTATAAATCATATTT ACCAATCCTGGACAGCATAGAATATCGGCCCTAAATGTTATAGCCATAGCAAATAGCAGGATGGCCACAATATTGAATAT TATATTTTCCACCTAAATATGCTATACATGTATTAATTCTATAAAAAAAATTAAAGACATGTTCCACATAAATTAGTCAT AGTCGAAAAAGGAAGAATAGTGGGGGCTTGAGTAGCAGAACATGGGATGAAAAAAGGATCTGCAAGCTGTGACACAGGCT GAGTAACAGACTGGAAAGAAAGTGCATAGTTGAGAACTGAAATCGAGTAGCAAGGGACACAGGCAACCAGTGGGGTGCCA GAAAATGCCTACTACTGGCAATCAGTGGCATGAGCCCATGAGAGTGGAAAAGACAACAAAGGCTTGCTTCATACATGTAT GAAGGCTGGAAATGAATAGAGGGGGGTATCCAATTTTCTGATGTGGAAAGTGACAACAGTAACAAAATATTAGGGCAAGA AAAGTCAGAAAAGGGACAAAATGGGGCTTTGACCTCCATCATGCAATAACAGCATTAATCTCTGAGAATGGATGTGATTA TGGCCACGAATCACAGCGCTAAAAACATGACACAAAAACACTCACAACACACTGCAACACCACTATCTCACTGTGCCACC ACTATATCTCGCAATTAATAACCCTGTTATAGATAGATAAAAGCCAAAGCACATAATGACAAGGCACCACACAGCTTATT CTTCATATCCTCACAATTATAGTTTTGTGATTCTATAACTAATTTCATATGATACCTCTCAATATGAATAAAGTTTCTTT AACTATCATTCATTCACTTGGTAAATCCAATTTATCAATTCTTAAAGAGTTGCGATGCGGATAGAATTTAACTGAGTAAA CATATGGTAATCTTATTCTTACCTACATATTGAGTTTATACAGTCACAAATATATTCAGATGTATCCAGTGTTATCAAAT AGCAGCTATAGCGGCGCGTGTTGCGGATTTTCGGCTAATCGTGACGCCGCTATTGCCCACTATAGCGCGCTATTCGCCGC TAAATAGCAGATTTTTGGCTCACTGTGATGGTCCGCGGTCGCGATTTGACAACACTGATGTATCCCACTTAGTCTCTATT TTCACAACTTCACTCCTCTATTCCTCATTTCTATAACATTGAATTCAAGTTAATAAATTACACAAAATGATTCCGTCTTC ACAGACGAAACTAGGCACATCAAATTTGAAAAGTTTGCGTACAACAGTAAGATTAACTAAAAAAAAATGTAACATGAAAC TCCATTGACTGTTGCCTTCCAAAAACAACTATGCACATTCAATATTCCAATGCCATGAATAAAAAAAACCGCAATTAAAT ATTGATTCCAATGCTAAAACCATTTCCAATTCGATATGCATAGGAAAAACATAAAAAGGAACTTCATAGAGAAAGAGGTT ACCAATGTCACACTCTGTTCCAATGGCAAGAACAGTAGCCAAGTACTTGGTATCAGAGCCACGCTTTTTTAGCTTAACCT GAGTGTAATGCTCTACAGAATGCGCATTGGTGAGAACCCTCCTCCCAGCAATCACAAACCCACTGCTACTGGAGCTGTAC TGCCTCTTCCTCTGCCACGGCAGCGAGAAATTCGGCTCGGTATGCACACAGAACACCTTCACCACCGGGTCCATCGCCGG CAACACTCTCGCAGCCACCCCCTCAAACACCGGGTCCGGTTCCATGATGGTTGCAACCCCAACCTCAGCCGGGACGGCAC TACCATCGACGTGACGGGGGAGGCGGCGCCCGGGGGGCTTATCGGGTATAGCAGGGGTCTTCCGGGGTCGGCCACGGCGG CGGCGGAGGTGTGGGGAGGAGGTGTCGTCGATGAGGTCGACGGAGCCGTTTGAGAAGACGTCGTCCATGCTGTTGTTGTT GTTGGCGGCGGCGGTGGTGGTGGTGGCGGGGATGTCTAGGGTTTCGGGGGCGGGGTTTTTGGGTTTGCGGCCTCTCTTAC GTTTGTTGTTGCTTCCTCCTCCCATCTCTCTGGGCATTAGAATTGAGTACGCGGAGGAAAAGAAACCCTAATCTATGTAT GGGAAAAAATGGTGTGAATTAAAATTGGTTTTAACCAGTGAGACACGGTATGAGAGGAGAAGAGGTGGGAAATGTTGAAT AGAGAAGAGAAGAAAGAATGAGGAAGGAGCCTAAAGAAAACAAACTGATTGTTCTCTCTAGGACTAGGACTAGTAGGATT TCCTTGGGGTGAGAGGAGCCTTTATAGGCAAAAAGGGTTTGGA 

CDS sequence (LotjaGi4g1v0238600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAGTAAGAAGCTATTTGATGGAATCAGCTCCATTTGCAGCCATGGTGATTGTGGAGTTCCTCGATGTGGGATTAAC CACATTGAGCAAAGCAGCCATGTCTAGAGGAATGAGCCACTTTGTCTTTGTTGTCTACTCCAATGCTCTTGCCACTTTGA TCCTCCTCCCTTCCTCTTTCCTCATCAACAGAACAACAAGACCACCCCTTTCTTTCTCGCTTCTCAGCAAATTCTTCCTC CTTTCACTTGTTGGCATAACTGTGATGCAGAATTGTGTGTTCACTGGCGTAAACTACAGCTCTCCCACTCTTGGATCTGC TATGAGCAACTTGACTCCAGCAATCACTTTTGTGCTAGCCATCATCTTTAGGATGGAGAAGTTGGACATTAGAAGCTCAG TAAGCCAAATCAAAATTGTGGGCACAGTGCTATCAATCTCAGGAGCATTACTTGTTACCCTTTACAAGGGCGCTCCCATT GGCAGCTTCAAAATTCAACTCACTCCGTTGGAAACGTTCCCATTTCTGTTGGCAGAAACCAGTAACTGGGTCATTGGGGG GCTCTTCTTTGCTGCTGCATCTTTATCTCTTGCGCTCTGGAATATTGCTCAGGCAGCAATTCTTAAAGGATATCCTGCTC AGTTGACTATAGTAGCTTTTTACTGCTTGTTTGGAACGGTCCAATGTGCAATACTTTCTCTGATTGCAGTCAGAGATACA AATGCCTGGATTATTACACCTGGCATTGAGCTCATCTCCATATTCTATTCAGCAATTTTCGGAAGTGTGGTGACATTTTC TGTACTGACGTGGTGTATAAATAGGAAAGGACCTGTATTTGTTGCCATGTTCAAGCCTGTGGGGATTGCCGTTGCTGCGT TTATGAGTTCTTTCTTCCTTGGTGATACACTGCATGTTGGCAGTGTCATTGGCGCAGTAGTGATCGCCATCGGATTTTAC AGTGCTGTGGGCACAATCCAAAGAGACAAATGTGAAAAGCCTCGAAGCTGA 

Protein sequence (LotjaGi4g1v0238600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGVRSYLMESAPFAAMVIVEFLDVGLTTLSKAAMSRGMSHFVFVVYSNALATLILLPSSFLINRTTRPPLSFSLLSKFFL LSLVGITVMQNCVFTGVNYSSPTLGSAMSNLTPAITFVLAIIFRMEKLDIRSSVSQIKIVGTVLSISGALLVTLYKGAPI GSFKIQLTPLETFPFLLAETSNWVIGGLFFAAASLSLALWNIAQAAILKGYPAQLTIVAFYCLFGTVQCAILSLIAVRDT NAWIITPGIELISIFYSAIFGSVVTFSVLTWCINRKGPVFVAMFKPVGIAVAAFMSSFFLGDTLHVGSVIGAVVIAIGFY SAVGTIQRDKCEKPRS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 11 11 -
TMHMM 7 26 20 -
PANTHER 8 324 317 2.3E-156
PANTHER 8 324 317 2.3E-156
Phobius 12 29 18 -
Pfam 25 153 129 1.0E-10
Phobius 30 40 11 -
Phobius 41 62 22 -
TMHMM 41 63 23 -
SUPERFAMILY 48 156 109 3.27E-8
Phobius 63 73 11 -
TMHMM 70 89 20 -
Phobius 74 97 24 -
Phobius 98 102 5 -
Phobius 103 125 23 -
TMHMM 104 126 23 -
Phobius 126 136 11 -
Phobius 137 155 19 -
TMHMM 139 161 23 -
Phobius 156 182 27 -
TMHMM 181 203 23 -
Phobius 183 203 21 -
Pfam 185 320 136 2.8E-9
Phobius 204 214 11 -
TMHMM 215 237 23 -
Phobius 215 237 23 -
Phobius 238 248 11 -
SUPERFAMILY 241 320 80 7.59E-5
TMHMM 242 264 23 -
Phobius 249 272 24 -
Phobius 273 278 6 -
TMHMM 277 299 23 -
Phobius 279 300 22 -
Phobius 301 305 5 -
TMHMM 304 326 23 -
Phobius 306 326 21 -
Phobius 327 336 10 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Molecular function Transmembrane transporter activity Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0238600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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