Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0238600 |
| Transcript ID | LotjaGi4g1v0238600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT5G40240.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240; TrEMBL-Plants: tr|G7JNU3|G7JNU3_MEDTR WAT1-related protein; Found in the gene: LotjaGi4g1v0238600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:55470852..55479671) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGTTCTATCATCACTTCCTCATGCGAAAAGTAGGTGCCAATGCAATGGCAATGCTATAGTCAGTCGTACAGGAAAG GAAAATATCTGAATCCTTGCTTTGTGGATGGGGGGGTAGCTACCAGTATTACCTACTGAGTCAACAACACTCAAGACTTT AATTGCTTAGTTTTATTTCAATTTTCAGTATTGAAATCTCTTAATACCCAATTCAGTGTCCAAAGTATCTGTGTAGAAAG ATCAAATGGGAGTAAGAAGCTATTTGATGGAATCAGCTCCATTTGCAGCCATGGTGATTGTGGAGTTCCTCGATGTGGGA TTAACCACATTGAGCAAAGCAGCCATGTCTAGAGGAATGAGCCACTTTGTCTTTGTTGTCTACTCCAATGCTCTTGCCAC TTTGATCCTCCTCCCTTCCTCTTTCCTCATCAACAGGTCTCATTACCTTCTTCTCACTCTTCCTCCTCAGTCAGTCCTCA CTATCATCATCAATTTTCCATTCCTCTTGTTTGCAGAACAACAAGACCACCCCTTTCTTTCTCGCTTCTCAGCAAATTCT TCCTCCTTTCACTTGTTGGGTATGTAACTGTGTATGCAATTGCATTATTTATATATATTGTTCTTAATCCTTTATGTGGT AGGAAAAAAAGTCAACTGCACTGAACAGAAATGAAGAACCTTGTTCATTTTGTGCAGCATAACTGTGATGCAGAATTGTG TGTTCACTGGCGTAAACTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATCACTTTTGTGCTA GCCATCATCTTTAGGTAATTGGGTTTTTATTTGTATAGATAAATTGTTCTCCAAACATGTTGTAAGATAGAGTTTACACT TATAGCTTGGGTTTTATCAAATTTATGTTTGTATTTAGGTTATTAGGACAAGGTAAACTTAGAATAGTGCATAACTTATT GGATTATTGGATTACTTTACTTCCTTAAAAACCCTTCTAGGATGGAGAAGTTGGACATTAGAAGCTCAGTAAGCCAAATC AAAATTGTGGGCACAGTGCTATCAATCTCAGGAGCATTACTTGTTACCCTTTACAAGGGCGCTCCCATTGGCAGCTTCAA AATTCAACTCACTCCGTTGGAAACGTTCCCATTTCTGTTGGCAGAAACCAGTAACTGGGTCATTGGGGGGCTCTTCTTTG CTGCTGCATCTTTATCTCTTGCGCTCTGGAATATTGCTCAGGTAAGTGAGATGCCTTTGATTGATTAGATAGACTACATG ACTTAGTAGATCTTCAACTCTACTGATAATGAATGAGAAATTGACAATGTGTCTGTATAATTTGGTTGAACATGTTTGCA GGCAGCAATTCTTAAAGGATATCCTGCTCAGTTGACTATAGTAGCTTTTTACTGCTTGTTTGGAACGGTCCAATGTGCAA TACTTTCTCTGATTGCAGTCAGAGATACAAATGCCTGGATTATTACACCTGGCATTGAGCTCATCTCCATATTCTATTCA GTAAGCACAAAAATAGCAACCAAAATAAAAACTAAGAAAGAAACAACTTGAAGTTTTGACTCATCGAGGGTTTATTGCAA AAGCTAATTCATTTATGAAAAACGATATTGCAGGCAATTTTCGGAAGTGTGGTGACATTTTCTGTACTGACGTGGTGTAT AAATAGGAAAGGACCTGTATTTGTTGCCATGTTCAAGCCTGTGGGGATTGCCGTTGCTGCGTTTATGAGTTCTTTCTTCC TTGGTGATACACTGCATGTTGGCAGGTAATTCTCACTTTGAAAATATCCTTTGCTATGTTCACTCATGATGGGAATTTCT TGTCAAATGTCAAGTTGTCAACAATAGAATGCATTAAGTGTTAGAAATGTAGTTGCATAGAAAAGATGCAACACAAACTA CACAATGGCATCACCACACTCCTTTGATTCCACCGACAGCTCTCACTGATTCTGTGTTGTGTTTGAAATTTTAGTGTAAC TAACATTTCTCTCTTTCTTTTAACACTCCCAGTGTCATTGGCATTCTGTGTGGTGTTTGAAATTTTAGTGTAACTAACAT TTCTCTCTTTCTTTTAACACTCCCAGTGTCATTGGCGCAGTAGTGATCGCCATCGGATTTTACAGTGCTGTGGGCACAAT CCAAAGAGACAAATGTGAAAAGCCTCGAAGCTGATAGACTCTCATCCCCGTCACAGACAAGCCCTCTACTAGAATCGCCA TGAAAAGCAACCATTGACAGGAGTATATTAGTAATCTAGTCAATATATTAAAGTGAACAGACACCAGATATGAAATTCTT AAGAGTTGTGTTTTGTATTCCTTGCTCTGGGCAAGTATATAAGATACCACCACATTGGTGAAAGTAATGGAAACTCTTTA CATTGCTCATTTGCCCCCAAAATTCAATAACGGAAGATAAATAAGTGTGAATCCTGCTTAGCTATCTGTCATTCCTTTCA AAATGTGGAATAACCAGTTCCCAATAAGTTAAAGCACAAAAAAGAAACATTACATAACTCCCAATACCATGTCAGGACAT AATCTAACAAAAAAACTCAAGTCAAGCCTACCCAGCTGCAACTTCTTTGACCGGACACTGCATGAAACAGCGATCTACCT GTAGAATCTATCTACATTAAGATCCAGGTCATGACTTAAGATCATCAGACATTGCGGATGGAATGCAGTGTGTTGCAAGA ATGTCTAAAGTAGCTGCTTTTGCAGTCTTTGTGCGAAGGACCACTATCTGCATAGAAGACGATTAGTTAATAAAGGGCCT AATTTCACGTTCGCATAAGCACACAAAACAGAGTGAGGGATAAAGAAGGCACCTGATCATATTCTAGATTAAATTTTAGA TATTCATCACGACAGCTCTCTACCATAGCGGCCAAGCTTTTGAGATTTTTCACAGGTTTACCATTGAAAGCGAGGACCTT CACAAATACACAGAATAGAAGGCAGTAAATTAAGTGGTTAAGCCAATAAAGTTATCAGCAAGGAAAGCAATAATATGAAA ACCATTATCAACCTGAGTGTTAACAATATCTTCATATCCAATGTTGATATCAGCCACCAGCACCTTGAATGTGTCAAAAA AAAAGAGATATCAGACTTGATAAGACACCTGAGACAAACAGAAGAAGGAAAAATTAATAGAGAGACTTTACCTGAGAGAT CACAACAAGTTGTTCATCTGGTGATTGTGGCATTGAATGCAGCAGTTTATCCAAAAGCTTGACTGGAGCTTCAAACTCAT AATCTTTTCCATACTGTTCATACATGACAAAATGAGTTGGAAAAGAATGGCTCCACAAGAAAGCATAGCAAATGGACGTT GTATTAATAAATTTACAAATTAATGCCAAAAGTACAGCAAATCATAAAGTTACAAGCTACATGGTGAAATTATATTAGCC ATGGCAACCATGACCCAAGAGGGCCAAGAAGGGGGTAAATTGGGTGATTACAAATTTGAAACCAACTTTGGAGCTATATC ATATCATATACACAGCTCAGGTAGTGACACCTTATCATGGTAGTCATAACCCCAATTAATTGCACAATCCTATGACTACG GAATTACAGTGCATCTGGGCAAATTATAATCAGTCATACAATCCTTCTTTGGCTATATCAGACCATAATCCTGATTTTTT TGAAAGAGATCATAATCCTGATTAAAACCACATAATCACACATCAATTGCGATTATGTGATTAAGCTCTGCCCATGTGAT GCAGGTTTGTCCCGTTTCCTAAATGCAACCCGGTCTGCAAAAACCCTTTTTTTTGCAATTGAGCCCAACCCCCCCCCCCC ACCACCCCACTACACCAACGGCGCTCCGACATCATCGACGAGGCTCCTCCACCGGCAATGAAGCTCTGATCGTGAAGCTA CTCTCCGGCCTCTTCCCTATTTTAGCTTTGATCCCTGTTTTAATATGGCTTCTCCTCATGATGGCAGTCAGTCAAGTGGT GCTTCTGGGACTGTGGCTGGTACCGAAGATGGCAGTTTTATGAGTTATACTTTATGACTTACAAGTTATGAGTACAACTT TATTTAAGTGTTTCTAGTTACTTAATGTGCTTTTAGTATTATTATTTAAGCTGCAGATAGGAATTTTGCTAAACCTTATG ATTATGCGATTTACAATTAACATCCTCTTCCCGATTAAAGGCATAACCCTGATTTTGAGTACCTTGCATGAGTTGCACCT AAAAGTGAAACCTTAACCACTAGACAGAGTAGACTTATATTAGATTAATACATGAAGTTATCTACTGAACTCATCATTTT CCCATATAATCAACTTAACCACAGGCTCCAACTTTCATACAGGACCACATCACTTGCCTAGAGCCCATTACACACTTAAA TACAGCAGATAGCAGAACATAATCTATATTGCAATAAAAACTGAACCATTTCGATTTTCCATGAAAACCCAAGATAAATT CACCAATCACTAGCAAAATTCACTATATCACTACAGTATAAAAAATGTAAATATCAGAAATAATGTGAAACTTCTAAAGT CTAAACATCTCAATAACCTCCTTAGAATAATGATCATGTATTCATGTATTAGGATTCCTGCAGCAATAATGAAAAATTTC CATTTCACACAGATTATGTTTGCCAAGAATACAAGTATCAGTTTATCATGTATTTGAATACAACTTCGAGGAAGACACAT AGAAAAACAATTTATATTAAAAAAGAGTAGTAACAAAATCAATGGTATCACCCAGACACTAAATGTTATCAAAGCGTAGG GGAATGGTAGGTTAAACACAAACCTCCGAACGAAGATAAGGAACTGAAACAGCTGAAAAAACAAATCCTGCAATAATATA ATACGAGGGAGGCTTGCCCTTGCTGTGTGCTGGAATAAGCCTTCTATGGCTATTGAGTTTAACGTCAAATGTTAAAACAT CAGAATTCCGCAATACTTTGATCACTGCATTATCACCAGTATATTTCTGGGATATGAGATAACTGAAACCAATGCGCTCT CCATGACGAAAGGGAACTGAAAAGAACACCAGGAGTAAAAAGCGTTATACAACAGACTATGAAGCTCATGCTATGTTTAA TGCTGTCGACAGGAGACGTGGTTAATTACCCTAGGTCTCACTTTTGCCACTAAAACACATACAGAAAACAGTGCACCAAG CACATTAATCTAGACACCTAGCTGATTTTAGATATAGGACCAATAAAACAAATCTATCTTGATAGTTGCTGTCAAACTGC ACCTAAACAAAAATAAGCTACAAAGAATGCATGTATAAAGAAACCGAAGGAAAACCGCTCACCTGTTCCATCATTGGCAA TATTAACCCCATCAAAGCTAAGAATAACATCTGATGGTTTCAAAACCTTAGATTCAGGAGCAGTAGGATCAATTCTTCTA ATACGCACACCTTTCTGATCAGATCTCATGCCCATTGACTTTCGTAGATCAGGATTTTCCATTTTCTGCCACTCAACCCC AAGAATAGGGAAACCTAACAGCATATTAAAAAGGAGAAGTCTAAGCAGATAAAACTTCAATAATATTAAATTTTACAATG CTCAGATAACAGCTTTGGAAGTGAAATATACATCTTAGTTCACAGCAACCACATTACCAGTATAACTCCCATTCTTCTCA TAATCACGGATGAAATGCATGATAACTGGCGTCGGAATGACATAACCTATATTCTCCACATCTTCATGCTTAAGTGACTG AAATGCAATCCCCACACAGTTTCCTTTATCATTAAATGCAGGCCCACCAGAATTGCCAGAATTTATAGCAGCATCTATCT GCAAAAACGACCTTGATGAAGGGAAACCATGATAGGATGCACAGACCATAACAAAATGATAAAGGTTGAAGGGATCAATG ATTCCAGCCTAACCTGTAAACCTAGAAGCTCAGTGGAACCATGGACATACGATAGAATCTCAATGCGTGAAACAACACCG CTGGTAACAGAGATGGTGTCTCCGCCAATTGGGTAGCCCACAACAGTGACTGCATCTTGAAGTGTGGGCAAATCCCCAAA CTCTACAGGAGACATCCCTTGCCAGAACTCATCATCATCAACTGTAAGCAGGGCTGCAAAAGTGAAATAAAATGCATGAC ATAGAACTCATATTAGAAAGTTCAGCAAAAATTGTACTTTGTGATACTGATAGGTATTTAATAGAATAATAGTTAGTTAT TTGGAATAATGAACAAGGCATGTTGCCTATATATAGAATGAGGGGTTAAGGGGGTTAGTTATTTTGAGAGAATCGGGGCC TTTGGGCCTTAGGAGGTGCAGATCCTAAATGTTCTGAATTGTAAGGGTGCCCTACCTTTGTAATTTGGATTAATCCTTAT TTTCTTCTAAAACGATACCTGCTTCTATCAAATACTTTATACAGTCAATTAGTAATTCTATGACAAACCCCACCCCCCAA AAATATTCTCGGCCTAAATCTACTATCATTTATATATCATATATTATAAATCATATTTACCAATCCTGGACAGCATAGAA TATCGGCCCTAAATGTTATAGCCATAGCAAATAGCAGGATGGCCACAATATTGAATATTATATTTTCCACCTAAATATGC TATACATGTATTAATTCTATAAAAAAAATTAAAGACATGTTCCACATAAATTAGTCATAGTCGAAAAAGGAAGAATAGTG GGGGCTTGAGTAGCAGAACATGGGATGAAAAAAGGATCTGCAAGCTGTGACACAGGCTGAGTAACAGACTGGAAAGAAAG TGCATAGTTGAGAACTGAAATCGAGTAGCAAGGGACACAGGCAACCAGTGGGGTGCCAGAAAATGCCTACTACTGGCAAT CAGTGGCATGAGCCCATGAGAGTGGAAAAGACAACAAAGGCTTGCTTCATACATGTATGAAGGCTGGAAATGAATAGAGG GGGGTATCCAATTTTCTGATGTGGAAAGTGACAACAGTAACAAAATATTAGGGCAAGAAAAGTCAGAAAAGGGACAAAAT GGGGCTTTGACCTCCATCATGCAATAACAGCATTAATCTCTGAGAATGGATGTGATTATGGCCACGAATCACAGCGCTAA AAACATGACACAAAAACACTCACAACACACTGCAACACCACTATCTCACTGTGCCACCACTATATCTCGCAATTAATAAC CCTGTTATAGATAGATAAAAGCCAAAGCACATAATGACAAGGCACCACACAGCTTATTCTTCATATCCTCACAATTATAG TTTTGTGATTCTATAACTAATTTCATATGATACCTCTCAATATGAATAAAGTTTCTTTAACTATCATTCATTCACTTGGT AAATCCAATTTATCAATTCTTAAAGAGTTGCGATGCGGATAGAATTTAACTGAGTAAACATATGGTAATCTTATTCTTAC CTACATATTGAGTTTATACAGTCACAAATATATTCAGATGTATCCAGTGTTATCAAATAGCAGCTATAGCGGCGCGTGTT GCGGATTTTCGGCTAATCGTGACGCCGCTATTGCCCACTATAGCGCGCTATTCGCCGCTAAATAGCAGATTTTTGGCTCA CTGTGATGGTCCGCGGTCGCGATTTGACAACACTGATGTATCCCACTTAGTCTCTATTTTCACAACTTCACTCCTCTATT CCTCATTTCTATAACATTGAATTCAAGTTAATAAATTACACAAAATGATTCCGTCTTCACAGACGAAACTAGGCACATCA AATTTGAAAAGTTTGCGTACAACAGTAAGATTAACTAAAAAAAAATGTAACATGAAACTCCATTGACTGTTGCCTTCCAA AAACAACTATGCACATTCAATATTCCAATGCCATGAATAAAAAAAACCGCAATTAAATATTGATTCCAATGCTAAAACCA TTTCCAATTCGATATGCATAGGAAAAACATAAAAAGGAACTTCATAGAGAAAGAGGTTACCAATGTCACACTCTGTTCCA ATGGCAAGAACAGTAGCCAAGTACTTGGTATCAGAGCCACGCTTTTTTAGCTTAACCTGAGTGTAATGCTCTACAGAATG CGCATTGGTGAGAACCCTCCTCCCAGCAATCACAAACCCACTGCTACTGGAGCTGTACTGCCTCTTCCTCTGCCACGGCA GCGAGAAATTCGGCTCGGTATGCACACAGAACACCTTCACCACCGGGTCCATCGCCGGCAACACTCTCGCAGCCACCCCC TCAAACACCGGGTCCGGTTCCATGATGGTTGCAACCCCAACCTCAGCCGGGACGGCACTACCATCGACGTGACGGGGGAG GCGGCGCCCGGGGGGCTTATCGGGTATAGCAGGGGTCTTCCGGGGTCGGCCACGGCGGCGGCGGAGGTGTGGGGAGGAGG TGTCGTCGATGAGGTCGACGGAGCCGTTTGAGAAGACGTCGTCCATGCTGTTGTTGTTGTTGGCGGCGGCGGTGGTGGTG GTGGCGGGGATGTCTAGGGTTTCGGGGGCGGGGTTTTTGGGTTTGCGGCCTCTCTTACGTTTGTTGTTGCTTCCTCCTCC CATCTCTCTGGGCATTAGAATTGAGTACGCGGAGGAAAAGAAACCCTAATCTATGTATGGGAAAAAATGGTGTGAATTAA AATTGGTTTTAACCAGTGAGACACGGTATGAGAGGAGAAGAGGTGGGAAATGTTGAATAGAGAAGAGAAGAAAGAATGAG GAAGGAGCCTAAAGAAAACAAACTGATTGTTCTCTCTAGGACTAGGACTAGTAGGATTTCCTTGGGGTGAGAGGAGCCTT TATAGGCAAAAAGGGTTTGG
CDS sequence (LotjaGi4g1v0238600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAATTGTGTGTTCACTGGCGTAAACTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAAT CACTTTTGTGCTAGCCATCATCTTTAGGATGGAGAAGTTGGACATTAGAAGCTCAGTAAGCCAAATCAAAATTGTGGGCA CAGTGCTATCAATCTCAGGAGCATTACTTGTTACCCTTTACAAGGGCGCTCCCATTGGCAGCTTCAAAATTCAACTCACT CCGTTGGAAACGTTCCCATTTCTGTTGGCAGAAACCAGTAACTGGGTCATTGGGGGGCTCTTCTTTGCTGCTGCATCTTT ATCTCTTGCGCTCTGGAATATTGCTCAGGCAGCAATTCTTAAAGGATATCCTGCTCAGTTGACTATAGTAGCTTTTTACT GCTTGTTTGGAACGGTCCAATGTGCAATACTTTCTCTGATTGCAGTCAGAGATACAAATGCCTGGATTATTACACCTGGC ATTGAGCTCATCTCCATATTCTATTCAGCAATTTTCGGAAGTGTGGTGACATTTTCTGTACTGACGTGGTGTATAAATAG GAAAGGACCTGTATTTGTTGCCATGTTCAAGCCTGTGGGGATTGCCGTTGCTGCGTTTATGAGTTCTTTCTTCCTTGGTG ATACACTGCATGTTGGCAGTGTCATTGGCGCAGTAGTGATCGCCATCGGATTTTACAGTGCTGTGGGCACAATCCAAAGA GACAAATGTGAAAAGCCTCGAAGCTGA
Protein sequence (LotjaGi4g1v0238600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQNCVFTGVNYSSPTLGSAMSNLTPAITFVLAIIFRMEKLDIRSSVSQIKIVGTVLSISGALLVTLYKGAPIGSFKIQLT PLETFPFLLAETSNWVIGGLFFAAASLSLALWNIAQAAILKGYPAQLTIVAFYCLFGTVQCAILSLIAVRDTNAWIITPG IELISIFYSAIFGSVVTFSVLTWCINRKGPVFVAMFKPVGIAVAAFMSSFFLGDTLHVGSVIGAVVIAIGFYSAVGTIQR DKCEKPRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 236 | 236 | 3.2E-116 | ||
| Phobius | 1 | 18 | 18 | - | – | |
| PANTHER | 1 | 236 | 236 | 3.2E-116 | – | |
| SUPERFAMILY | 3 | 68 | 66 | 4.84E-5 | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 19 | 37 | 19 | - | – | |
| Phobius | 38 | 48 | 11 | - | – | |
| Phobius | 49 | 67 | 19 | - | – | |
| TMHMM | 50 | 72 | 23 | - | – | |
| Phobius | 68 | 94 | 27 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 95 | 115 | 21 | - | – | |
| Pfam | 97 | 232 | 136 | 1.3E-9 | ||
| Phobius | 116 | 126 | 11 | - | – | |
| Phobius | 127 | 149 | 23 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| Phobius | 150 | 160 | 11 | - | – | |
| SUPERFAMILY | 153 | 232 | 80 | 3.14E-8 | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 161 | 184 | 24 | - | – | |
| Phobius | 185 | 190 | 6 | - | – | |
| TMHMM | 189 | 211 | 23 | - | – | |
| Phobius | 191 | 212 | 22 | - | – | |
| Phobius | 213 | 217 | 5 | - | – | |
| TMHMM | 216 | 238 | 23 | - | – | |
| Phobius | 218 | 238 | 21 | - | – | |
| Phobius | 239 | 248 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0238600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…