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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0243700 |
| Transcript ID | LotjaGi4g1v0243700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT1G59640.1 transcription factor BIG PETAL P (BPE); Swiss-Prot: sp|Q9LV17|BH079_ARATH Transcription factor bHLH79; TrEMBL-Plants: tr|I3SAA0|I3SAA0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0243700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:59507680..59514644) extracted from Lotus japonicus Gifu genome v1.2.
GAATTGTTGGTGTGTGGAAAGAGTAAAGACCCATCTTTTCCCTTTCCCACTTGAAGATATATTGAAGAAACATACATGGC ATGGGAGGTTAAAATTCCTTTTTAAAAAGGTGGGAAAGGGATGAGATAAAAGCGGCAAAGAGTTAGATAAGAACCGCAGC ATCACTACACCACACCATACTCCCGCCCCAAAACCACCACCACCACCACCCAGAAACAATGAAAACGATCAGAAACTAAC CTCCTTACACTCACTCTCACTCAAACTTCACTCACTATCACTGTCTCCATCATCAAACTCCAATAAATTAACCATCAAAT CCTCACCAAAAAATTGAATGAAATAATGGAACCTCCCCTCTTCAACGACTCCACATTCTCCTCCGCCAACCCCTCCTTGT CTGAAATTTGGCCTCCGGACCCCGACCCCACCACCAGCTCCACCCTCCTTCCTCCGCGCCGGAAAAGAAACCTCCCTCCC TTCTCCTCCTCGGTTGGCTTGCCACCTAATTTTGTTCCATTTTAATTGAAAGTTAGTTAGTTAATTCGCGGCACTGAAAC GGTTTTTTTTTTCTAACTGAATTCTGTTACGGTTATGAAACAGAATGATAGTTGCGGCAATAAGCATGTGAAGTTGGGAG ATTCCGTGGATGAGTTGAAAGGTGAGCCAGAGAAACAACCACCTTCTCCGCCGCCTCCGCCGCCGCCTAAGCAAGACTAC ATACACGTCAGAGCCAGAAGGGGACAAGCCACCGATAGTCACAGTCTCGCTGAGAGAGTATTTCTTTCACACCTCTCATA ATTTTCAATAAGCTTTGATTTTGAGGATGAAAATGTGTTGAATTTTTTTGATTTTTTGATGCAGGCCAGAAGAGAAAAGA TCAGTGAGAGAATGAAAATTCTTCAAGATTTAGTCCCTGGATGCAACAAGGTAGTTTGACATGTTTGAATTAACTTATTT TTGTCTTAGAATCAATTCTGACACTCAGAAGCTACTCGCGTAGGTTTCTATGCAAAATTGATTTGTAGAAGAATTTACAA ACATGTTTCATGAGTACTATCACTGCTGAATAATTATGTTTGTTTTTGCTGTTGTTATTACAATTAGGTGATTGGTAAAG CACTTGTACTGGATGAGATAATCAATTACATACAATCGCTGCAGCATCAGGTTGAGGTAGCTATCTTCATCTCTTTGTCT CTAATTTTCTATTGAGCATTACCACTTTAGTGACCTTAACCTTATTTTACAATCACTACTGCAGTTCCTTTCAATGAAGC TTGAAGCAGTTAATTCCAGATTCAACATGAACCCCACTATTGACTGTTTTTCTTCAAAAGATGTAAGTCAAAACCATTCT GTGAACAAAATATTAAGCACAGTTGTATCTAGTACGTTTAGATTCACTTTAAATCTTTATAGAATCACTTTTCCTCGCAG AAGTTATTCCTAGTAGACTTTTCCGTAATCAATTCTCTTCCAAACGTGGAAACTCATTGAAAACCTTGGACTGTGGAAGT TGATAATTGAAATGATTAGTTTTGCAACAATTTTCCTGCTTTACTAAAGAAACAAATAAAAACACAATGATTTGCAGGTT TGGGGGTCCATACAATTTTCCTTTAACTTTTAGCAGTGTAATAAAGTTAAGTATTGAAAATTTAACAAATTGTTATTAAA TGCTAAGGAGGTTCAATGAAAAATTCTGTGCCTAACTACTTTTCCATGACATTCTTTTTATACCAATACAAGCTAACACA AGCATGTGTTAAACATGGATAAGGAAAGAAGAATGTAACAGATGTGGATTGCAGAGATCATGGTAAAATGCTAAAATAGT GAATAAGATAATAAAACAAGAAATAATAAGTTAAGACTTGAAAATACGGTTCTCGCACAGGACAGATGTCGAACGCGATG TTGGGACAATCGGTTCGACAATTGCACAACAGTACATAAATTAAATCAACGAAAAAAACACAGGGAATTGTTAACCCAGT TCGGTGCAACATCACCTACATCTGGAGGATACCAATCCAGGAGTCAATTCACTATCAAATAATAGCTCTCAGGTCACATG AAAGTCCCTCCTATACCTAAGTACTCCCCCTTAGTATAGAGCCTCTTCAATGTCTACCACTATTACATAAGTGAATCTAG CTTAGCCCTTCTCCTCTAAGCTATGAGGAAACTTCCCCTAACTCCTAATGATCACTGCCACAGTGACCGATCCCTTACAA GAGATTGAAAGATAGATCTCATGATCAAACAACAATTTGAAGAGATTACAACTCAACTAAACAAACCAACTCTAAGCCAT ATGATTATCAATGGAGGCAGTAGAGAGGTGTACAAAATAACAGAACAAGGACTCACAAAACAAAACCCTAAAAACCCAAT CCTTGGGTGCCCAAGGCACACTTTGCAACTAGGGTTAAGCCTCCTTAAATAGGCTTTCTTCTGGTCTTGATCTTCAATGG GCTTGCACGAAAATAGAGTCCATAAAACAGATCTGGAACAAATCTTTTAAACCAGTAACAAATCTTATCAAATAAGATTT GAACAAAAGATAACATCTTTCACAATTTAAACCAAATCAAATCTTCTTCAACAGATTTGATTCCACTATATTATATTCCA GATAACAAATAGAAGCTTCTTCAATAACCTTAACTTGATTATCACGAAATCCATCCAAAGCTTCTAGAAAAATCAGCCAA ACACACAACAGATCCGCAGAACAAATGTGACAGCACGATGTTACAACATCTGCTTCGACATTAGGTTGTTTTTGAAAAAA TGCAGACAACCAAAAGTAACAACAAGACTTATTTTCCAATCATAGAATTAGAAAGTAAATGGGGAAAGGCTGTATAGAAA AATACAATGATGCAACAGCATCAGGTAAATTTAAAATTGTGATTTTGAGTGTCTGGCTCAAGCTGCTTTGGCAGTAATTG GGAGTGTCTAATATCAGAGAAGCCTGAAGAAATCAGCGAGTTTATATTTTTGTGAATTCTTTAAAGCCTAGAATCCGATG ACCCTGTTACTTGTCATCCAGATTGATTCCATGCTAGTGTGAATTATCACTATAAAGTATAAAGTGATCAAGATGTAGCA GTGATGAATGAATCCTCAACTGAAGTGAACCCTGTTGTTGTCTGTTATTTTCCGCTGATTCTAGGAAATGTTCTGTGACC TATGACAATCTGGAATTCTAGATCTTGAATCTTGAATTGCTATTTTTTTTAATTCATGTTTGCCTGTAGCTGACTGCTTA CCAGTTATGTCTTGGTCTCTTTACTGTCCAGTTTTTCATTTTTGTATGTTTTAACTGCTTAATTTGTCGCATTGTGCATG AAGTTTTTTGCTGTGATTGTTAATGTTAGGATCAGATTCTCTTCCAAAAGAATTTAGAGATTCTGGCATCTATGTTACTT ATTTATAACAGACAATATTTGATTTTATTCTCTTATTGTTAATATGTCCTGTGATCCATTATTTTCTGAAATAGCTTCAC TCTAATCATGGACATGTGTTTTTTATTCTTTTTTATTTAGTTTTAGTACAAACTGGTATATGTAGGACAATTGTGATGGA CAAGTGAGGTCCATAATGTTGTCTAGTAATGGTTGCACATTCTTTGGTATAGTTTGGTACACCTTTTTGTTAACGTTCAA GAACTAAAGTGAGACTATTTTTGAAAATGAGGGACCATTTTAAAAATCTGTGATTAAAACCAAATATTGTCCATTTTAAA GGGTCTAAACACATATTTTCCATGCTGAATGATCTTTTCCAGGTCACTGCAAAGCTAACCTTTCTATGCAATTAATGTGA GGCAACAATGAATTACTACTTTTGGCTACAAGATTACTCCACAGATGGAAAAATTTCTTTGCACTCATTTTTTTTATACT TGTCCAAACTTTAGTAGCAGAACAACTTTGGGTCATGGAAAGTGACCTAGTAAGGCAACTCTGTATACTATCTTAGGGAA CCCTCCCCCTACCATGCCATTCATTTGAAAAGATTTCTTTTACACATCTTTGCTTATTAGGACTGTTAATTTTCATAATA CTGTAGTATTAATGAGTTGATCTGTTGGTTCAGGTTGGTACTCAACCATTTGACCTTGCTGGAATAATATTTGGATCACA AGCATCCAGGGGTTATGCCCAGGGATCACAGCCTGGATGGCTGCATATGCAGATAACTGGTGGTTTTGAGAAAACAACAT AACACAAGGGAGATTCATTGGGAATGGCAGACCCTAAAAAAAATCCCTAGGGTTGGTTAGTTTCCATGCTTTATTAACAA CCTAGTAAAGTGCTGTAGATTGCTGTATATCTATATGTCCATTGTCATACCATGTTTTGCTTCACTATGTTAGCAACTGA AATAATCTTCTACTGTAATACAGTTATTCTCTCCTGATTTGTACTTGTGTAATTGGCAGGATATGTATTCGCATATGAAA ATTACCCCTTGTTATTACAATTGAGTCATTGTAAGAATCAGATTGGAAAACGGCAAATATGGCTTAGATTCCTGTATTCA TTGTTTATTAAAAATGATTAAAATTGATATGTTAATGATTCTGTCACATGAATGGAAACCTTCACAAGAATATGAAGCTG CAGTAAGACCTCATCAAACAAGAGTTTACAGTTCTTGCACACAAGAGAGAGTTAGACTTGCAACTTAGCCAAGCCTACTT CAGAGCCAGCAGTATAATTGGCATTTCTTCCATACAAGGCTGCAGTATATACAAATAAGAAAAGGCAAATATTGAAAATA ATCATATAAACATTCAGACCTTAGACAGTAATGCCTAAATTATCCTATTGAAGAATACTACAAGCCTAGTAATATGCAGA AGTAAAGAGATCAAAGAAGGTGATCATGCATTGTTCACCTCAAAGGACAACATTTCAATTCAAGTGCCTCATATTCCACT CTCTGCCAAGAGAGTTCTGCTTTCCGATTTCTTCATCCGGCCAAGAACATATGTTTTCTCCATTCTAAAATCTTTTAGCG ACTCATTGAGCTTTCCCCCTCCGTTCTCTGCCTTTGATGAGACAGCTTGATGAAGGCTGAGGTCTTTTTCTTCATTATCT TCATTGCCCCCATGGGATGAGTGAGCTTCGTTGAAATCATCTTCTGTAAGGCATCCATATTTTTCTCTGTAGATCCCCAA TTCTGTTTCCAAATTTTTTGTTTCTTCCTCAAGTTTGAGAATCATGTCATTATATTCTTGCAAGGCTTCTTCATCATACT CAATCTGCTCTTCCATCATTCTCTGATACTGCAAAGCATCCATCTGTAAAGCTGCCTTCTCTTCCTGTAAGCGCGTGATC ATGGCCATTGCATTGTTGGCAGCAACAGCTGAAGCACTTCTTTCTTCGTCCAACTCCATGTACAGAGCCATGAGCGACTT GCGATCCAAATGCACTTGCCTCTTCAAATTGTTAACGTCATCTGCTTCATCTACACCATTTACCTCGTTAGAGTCAGAGG CAAATTCTGTCTTTCCCAGTGATGATTTCTTGCTAAGCCCGCTAGACCATCTTGGACTGCTGTTTGGAGAATCTGCAGGT GGGATTCCAAAGAACCTATTTCTCCATGGAAGTGGGGTTTTTGGAGATTCAATGTTTGAATCCTCGGCTTGTGTCAATAG AGGCAAAGAGGCACCTTTGTCTTCTTCCCTTACTGTATATAAAATTGAAAGGAACAATGTCATGTGTGTTCTGTATTTTC GTCAGCAAAACTTGAAAGCATTCAGCATGTCTAACAATGAATTGAAAAAAGAAGTATGTTTTGGTGAATGTAACTAAAAT TCAAACACACATGACTTGGCTGAAAGCATTTCATAACTCGTTAAAAACTCATAGACCAACAATTGTAAAGTAAGCAATTT TTTTAGGTTTAAACTGCATAAGCTTTAGCTAGCATCTATATATAAGCTGAGGAAATTAATGTTTTGTATGCACTCACATG TATTATTCTGATTAACTTCTTTTTCACCTTCCTTGTTCTGTGGAAGCTCTAAATCAATTTGAGACATGGACTTGAGTTTC GAATACCGAAGGAGAGGACATTCGAGACTACGAGATTCCTCATGTTTAGGTGTCAAGCATGGATAAGCTCTTGGTGAAGC AGTGGGAGCTCGTGAAAGGAAAGCCTTGATTTTCAATGGTGCTCCACAGCATGAACACCTCTGAGCACTGTTTTTCTCAG CTTGTAAGACCCCATCATCCTTCAAGCTCAATTGAACATTCTGGCCATTATCCACAGAGCACTCCAGATTTTTATTCAGA ACCCCCACAAGGGACTTATAGGTATCACAATCTGATTCCTTCCCGGTTGCGAACGAAAGTAGGCACGCGTCACACAGCTT ACTTATCTCAGATAGCTTCTTGTGATTGTGACAGAAAGCCAATGAAGAAACATCTTTCTTGTGAGCCTCACATATGGAGT TGTTGTAATAGAAATTAGGAGTTTTGCAGGCCAGAACATGATTCATCCTCGCGCAAAGCCAGCACGGGATTTCCAATTCA AAATACTTGGCCAACTCAATGGCGAAAAACGCAAGAAACCCATCAAGGAAAAGCACAATTATCAACACCCATTCAAGCAC CATGCACAACAAGAAGTGTGGAATCCTTCCCAGTTGATGCTCCACAAAACGAATTAATGATCCGGTAGCCATGTTTGGTT TTCCTTCTTTTTTTATATTTATTTATCTATCTATCTACTTATCTGTTTTTTTTTTTTTTTTCCTTTGAAGAGCCTGCAAT TAAAAGCAGAATGCAAAGGATTGAGAAACCACCAAACTTTGTATGTGAAGAACAAAGTGGGGGAAAGAAAGATCGGGATC TTATTCAGAGGAGAAACAGATCATGACCTTTCTGTCTTTTTTCTTGACTTTCCTCTGCATTGCAATGCATTGCATGGGAA GCGAG
CDS sequence (LotjaGi4g1v0243700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCTCCCCTCTTCAACGACTCCACATTCTCCTCCGCCAACCCCTCCTTGTCTGAAATTTGGCCTCCGGACCCCGA CCCCACCACCAGCTCCACCCTCCTTCCTCCGCGCCGGAAAAGAAACCTCCCTCCCTTCTCCTCCTCGAATGATAGTTGCG GCAATAAGCATGTGAAGTTGGGAGATTCCGTGGATGAGTTGAAAGGTGAGCCAGAGAAACAACCACCTTCTCCGCCGCCT CCGCCGCCGCCTAAGCAAGACTACATACACGTCAGAGCCAGAAGGGGACAAGCCACCGATAGTCACAGTCTCGCTGAGAG AGCCAGAAGAGAAAAGATCAGTGAGAGAATGAAAATTCTTCAAGATTTAGTCCCTGGATGCAACAAGGTGATTGGTAAAG CACTTGTACTGGATGAGATAATCAATTACATACAATCGCTGCAGCATCAGGTTGAGTTCCTTTCAATGAAGCTTGAAGCA GTTAATTCCAGATTCAACATGAACCCCACTATTGACTGTTTTTCTTCAAAAGATGTTGGTACTCAACCATTTGACCTTGC TGGAATAATATTTGGATCACAAGCATCCAGGGGTTATGCCCAGGGATCACAGCCTGGATGGCTGCATATGCAGATAACTG GTGGTTTTGAGAAAACAACATAA
Protein sequence (LotjaGi4g1v0243700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPPLFNDSTFSSANPSLSEIWPPDPDPTTSSTLLPPRRKRNLPPFSSSNDSCGNKHVKLGDSVDELKGEPEKQPPSPPP PPPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEA VNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQASRGYAQGSQPGWLHMQITGGFEKTT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 56 | 56 | - | – | |
| MobiDBLite | 1 | 88 | 88 | - | – | |
| MobiDBLite | 58 | 72 | 15 | - | – | |
| PANTHER | 71 | 220 | 150 | 2.8E-100 | – | |
| PANTHER | 71 | 220 | 150 | 2.8E-100 | ||
| MobiDBLite | 73 | 87 | 15 | - | – | |
| Gene3D | 94 | 171 | 78 | 1.1E-15 | ||
| CDD | 95 | 152 | 58 | 4.33194E-11 | ||
| SUPERFAMILY | 95 | 167 | 73 | 4.19E-18 | ||
| ProSiteProfiles | 97 | 147 | 51 | 15.828 | ||
| Pfam | 101 | 148 | 48 | 1.1E-8 | ||
| SMART | 103 | 153 | 51 | 1.6E-10 | ||
| Coils | 144 | 164 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0243700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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