Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0247100.2

Overview

Field Value
Gene ID LotjaGi4g1v0247100
Transcript ID LotjaGi4g1v0247100.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT5G62530.1 aldehyde dehydrogenase 12A1; Swiss-Prot: sp|Q8VZC3|AL121_ARATH Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial; TrEMBL-Plants: tr|A0A0L9TS24|A0A0L9TS24_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0247100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:59839958..59845738) extracted from Lotus japonicus Gifu genome v1.2.

TTAGGAAACCATTTCTTTTCTTCATTTATTCATCAAAGTCTGAATTATACTAAGTGATGTTGTAAATTTCTGCACAACAT GTTTTTCAATTAACTCAACTTAAATTAAACTTATTGTGCCATGCTTCATTGACTATCGCTGTGTATGTGTTGTTGTCACT TTCAGTGCAGGGTAAATGGGTAGGATCTTCAAACTGTAATACAATTGTGGATCCTTTAAATGGAGACTCATTTATTAAAG TTGCTGAAGTTGATGAAGCGGGCATTCAGGTACATCTATAATTAAGTATTTGTCTGGTTGGCTTAATATTTTATATTGAG ATGTGTTCCTTTTTGTTGCCCATGCTGTTGAGTTTGAATTCAACTAATATGTATTCAAGGATGTACTCTTTTATTACTTC CTCTGTTCCTCATTCATTGTGTCTTTCGAACTAATAAATATTGAGTGCCTCAGGCATTGTTTATCAATCACCACTCAGCA GAACTGTTGTTTCAATATGATGTTGAAGTCTTAACCTCTGTGTGTGAGACAGGGTTCTCACCATTTTATGAGAAAGAAAG AAAATCAGTTTGACGGCTATTGATGGGTCGTTGATTGAAATTCAACAGTTGTTTTGAGACAGAGATCTTGACTAAAATTT AACTTTTGTTTGACATATCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAGCATGGTTTACACAATCCTTTTAAGGC ACCAGAGAGGTATGTGCAGATTGAACTTCTTATTTTCTCCATTTCCTTTCTAGAAACATATAAAAAGTTCCTCCCCCCCT TGGATTAATGATTGTCATCTAGGTCAAAAAACCACAAATTGCAGGCCACCTCATCCTTTAATATAAAAACTCTGCCTTTT GTTGTCTATTATATGATATTGTTGTCCAAGTGGGTTCTTTTGCTGAGGGAGGATATAGACTATTCCTGGAGGTTTTGGCC TTTTAACAATGATACAAATTTACATTTGGATAGAAAACAATACAACACAACAATTTAGTTACTTTCTTTTTGAAATAGAA TGTGAGGTGATTTTCAGATGGTTGGTTTGCAAGGTGTTAAGGGAAGTGCTAATCCTTTTCTTTTATGTTTCCAATTCCAA TTTTTGTGGCTAAACAAGGATTGGATTACAGAATGAACTTTCACCTTTCAAACTTTTGCTAAGAGGAGGAACTAAGGGTT TGAGGGAAATAATTTTTTTTTTCATCTCTTGCTTTCTTTTTGAATTACAAAAACGCCACTTCTTTCTGAAGCTACCTAAG ATAAGAATGAGAATAAATAAACATTTTACTGTCAACATTTGTCATTTTCACTTCAAGAATGCAACCAGCTCATACATTTG AGTTAACGTGACATGAATCCTCATAATCATATTTTGGCCATCCCTATTAAGTCTGAAGTAGGTATTTTTGACAAACCTTA TGCAGATATCTTATGTTGGGAGACGTAACTACCAAGGCAGCTCACATGCTATCGCTTCCTAAGGTATTTCTAACAAATTT TTTTATATTACTTTATTGAATTTATGAGAGATTAGAAAGTTGTTTAATCCATGTAACCAACCATATCTTGTCGGCGAAGA CTTTGGCTGTTGTATGTTACTTGATGGAGTTATGTTGTCACCTGTTGCATTCAAATCTACTAAACTTGATGTAAATTATT CTGCGTGACTCTCAGGTTTCAGATTTCTTTACAAGGCTTATACAAAGAGTTTCTCCAAAAAGTTACCAGCAGGCTCAAGG GGAAGTTTATGTGACACAGAAGTTTCTGGAAAATTTTTGTGGAGATCAGGTACATCAATATAAAAGACATGTTTGGTGCT AAATTAGTGAAATCCCAATTCCCAAGTACAAATATGTCATTCTCTGATATGGAATGATGGTAGAACCTAAATTGAAAGTC ATCTATATCAAAATAAGACATGTTGGTGCTAAATGAGTGAAACCTCAAGTACAAAAATCTACTCTGATACAGAATTACGG AACAACCTAGATTGATATTCATTTTTTCTTGGTTACCCTTGACTGGTAGATTTGATCATTTTCCTTCTGAATTCTATCAT TGAAGCCTGGATTCATCTTTACTAGAATAGTTTAACCCTGGCACGCATACACACTACACACAATGAACTAACATTTTCTT ATGTGGTTTCCCTATTGAAGTACAACGTTCATACCATTCCTTTAGTAATTTCTTCTTTGTCCTTGTTCATTTCAAAAAAT CCTTGGCAGGTTCGGTTCCTGGCAAGATCTTTTGCAGTACCTGGAAATCATCTTGGGCAACAAAGCCATGGTTTTCGTTG GCCATATGGTCCGGTAAGGATTACGTTTTATTTTAGTTTAAATTGGGATAACTTGTTCTGAAGGGAAAAAATAGTGTCAG TCTCACCATGTTTTATTTCTGATTTGGAATTGAAAGTGCACGTGAAGCTGTTGCGAAGTTCCCCTTCCAATACCTGTGTA ATCCTAAAGCTGAAAGTGTGTTCTGCAGGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCAGTCCTTCAGT TGATGGGTGCACTTTATATGGGAAACAAGCCAGTCCTTAAAGTCGATAGCAAGGTAACTTTCAGCTCTGATTTTGGCAGA CTTATATGACATCACATCTAATACAAAATTGATATGAGTAGGCTAGCTTCTAGACTACATGAAATATGAATAACAGTTAG TTATGGTAAAAATAATTGTGATTATATTATGTTAGGTTTTGGTTAAATTAATTTTATTTGAGATTCAAATATTTATGTAC TTGACTCTGAATTATTAATTTGAATTATTGTAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTTCTTCATAACTGTGG TTTACCGGCAGAAGATGTAGACTTCATAAATTCTGATGGGAAGGCAATGAACAAGCTGTTACTGGAGGTTGGTTGTTTGG TACCTTCTTTTTGGCATGCAGAGGATTCTGTAAAACAATATTGTTCCCGAAATATTACCGCTTCACTTTATGGTTTCACC TCATGATTATCTCAACTTTCAAGTCATATTGTTGACCTTATAAGATGTTATTGTCTTTTGAGCTCCTTTATTTTGTGATA ATCATATATTTGTATCTGTATGCGACTACATGTTCCTCTCACATAATGATAACGATGTTGTGTTTTTACAGGCAAATCCA CGAATGACCCTTTTTACTGGTAGTTCAAGAGTTGCAGAGAAGTTGGCTGGTGATTTGAAGGGCCGCATTAAATTGGAAGA TGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGTTTCTTACGATTTTTTTGTGGATTTCAGAATGGTAT TGACTCAGTATTCAGTTCTATAATAGTTTATCTACTATTTTTTTTATTGCAGGAAGATTACATTGCATGGGTCTGTGACC AGGATGCATATGCATGCAGTGGTCAGAAGTGCTCGGCACAATCATTGTTATTTGTGCATGAGGTCAGTTATTCGTGGTTA AATATCCTCAAGAACTAGGGTGAAGTTGTAATGTTGAAGTATTTTGATGCATCGACTTTGCTAACTCCAGGGTTTTGATC TCCATTTGTGCAGAACTGGTCTAAGACATCCTTAATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCAGACT TGACTATTGGTCCAGTTCTCACTGTAAGTATTGATGTTTATTTATTTTCGCCCTTTGTATATTGATCTAGGATTTAACAT TTAAAACTGTTTCGGTGCCCCCCCACCCTTGAAGTTTATGGAAGTTTTCTCTTTAAGGTGTTTAAAGTCAAATCTGCTTT GTAATCCTTTTTTAACTTTACATGAATGGAGTATAGAGTATTTCCGTAAGTTACGCGCAGTAGTTTTAATGATCATCAAC CCTTTTACTTCACAATATGAAAGATCATGCTTAGAGAAGAAAGCTAGTGGACTTGACAATTGGTCCAGTCCTCACAGTAA GAATGTTTGTTTCCTCCCTTTTATCTAGGATTTGACTTTTAAAATTGTTTTTGTGGACCCTTTGAAGTTTATGAAAATAT TTTTGAGGTGATGAAAGTGAAAACAACTTTGGAATTCTAGACAAGCTATATGCAATAGTTTTAACGATTGTCGTCCCTTC TACGGAAAAATATAGACAAGCTACCCATGCTTTTGTGTAATAGTTAAGTCACTGCTTTCAGGTTAAATACCAAATCCTGC CAGCTATCACAGTTGATTTGTCCTCAGCCATTTAGATCTATTTGCTTTGAATTGATTAACGGAACTGTAGAAGTTTGGAC ACTGATTTGTGTTCATTTATTTATATAATTTGATTAATGGTAGTATAGTACATCTGTGATAATGACTCAAATTTAGTGTT TGTGTGTTGTTAGCTGATGTAGGTTCTAAATTATTTGTTTGACGTTGTTGGTGGATGCTGAACCCTTATATATAAAAGAA TGAAGTAGTTTTTAATAAACCATTTCTTCCTGCAACCATCCAGGATGGTATAATATTTTATTTAGTAGCTAATTTGCCAA TTCATTGCTGGCAGAACAATTACAATTGTCTACTTTCTTTCATGAAATGCCAGGCTTGAAATTCTTAATTTTTCTTTTCT CATATGTTGCAGGTTACAACAGAGACAATGCTAGAACACGTGAATAAATTACTTGAGATACCAGGGTCAAAGCTTCTCTT CGGTGGTCGACCTTTGGAGGACCATTCAATTCCATCAATTTATGGTGCTATTAAACCAACTGCTGTTTATGTTCCTCTTG AGGAAATTGTGAAGGATAAGAATTATGAGCTAGTTACAAAAGAAATATTCGGACCTTTTCAGGTAATGAAAAAGGAGACT TGGAGCATGAAAATAGACTTCTGAATTCTCCTATGCCTTCATAATATCAGTCTGCTCTTATGGGGAGATAAATAATTTTT ATTTATCTTTGCAGATTGTTACTGACTACAAAAGCAGTCAACTATCAATTGTGTTGGATGCTTTGGAGAAAATGCATGCC CATTTAACTGCTGCTGTAGTTTCTAATGATCCTTTATTTTTACAGGCAAGATTTTTATGATTCAAAATTTTCTTGCTATG GATGTATGTAGTATGATGCAGTTATCAATTCTTAACCAGGTCTCAATGTTTATATCAAATCAGAAACTAAATACTCTGTT GATTTTATATTTCATTCATGAAACCACGTTATAGTTGTTTAGGATAATGTGTAAAAGTATATTCTACATATAAAATCAAT TGCTTGCAAGATTTTTGTGGTAAATAATAGTTTAACTCCTCTGAAGTTGAAATGTCCCACGATTTCTCATATATCCAACA TGCTACTTGCTTGTAAACCACATAAATGAGTGAATTATCTTTTGTAATTTTTTCATAACTGTGTTTTATTATATATATGC TGCATTGTGTATCTGATTATTTGCTGCTAAACATTTACAGGAAGTAATTGGCAAATCAGTCAATGGTACTACTTATGCTG GTCTAAGAGCAAGAACAACTGGAGCTCCACAGAATCACTGGTCAGTGGATTTTGTTAACCTGATTTTCTTGTAGGTTATA AAAAATTGATGTTTCAATATATTGAAAATAATGTTATTGTAGGTTTGGACCTGCGGGTGACCCTAGGGGTGCAGGAATTG GAACACCAGAAGCCATAAAACTAGTGTGGTCTTGTCACAGAGAAATTATCTACGATATTGGACCTGTGCCAGAACATTGG GAAATTCCTCCATCAACTTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0247100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGGGAGACGTAACTACCAAGGCAGCTCACATGCTATCGCTTCCTAAGGTTTCAGATTTCTTTACAAGGCTTATACA AAGAGTTTCTCCAAAAAGTTACCAGCAGGCTCAAGGGGAAGTTTATGTGACACAGAAGTTTCTGGAAAATTTTTGTGGAG ATCAGGTTCGGTTCCTGGCAAGATCTTTTGCAGTACCTGGAAATCATCTTGGGCAACAAAGCCATGGTTTTCGTTGGCCA TATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCAGTCCTTCAGTTGATGGGTGCACTTTATAT GGGAAACAAGCCAGTCCTTAAAGTCGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTTCTTCATAACTGTG GTTTACCGGCAGAAGATGTAGACTTCATAAATTCTGATGGGAAGGCAATGAACAAGCTGTTACTGGAGGCAAATCCACGA ATGACCCTTTTTACTGGTAGTTCAAGAGTTGCAGAGAAGTTGGCTGGTGATTTGAAGGGCCGCATTAAATTGGAAGATGC TGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTACATTGCATGGGTCTGTGACCAGGATGCATATG CATGCAGTGGTCAGAAGTGCTCGGCACAATCATTGTTATTTGTGCATGAGAACTGGTCTAAGACATCCTTAATATCTAAG TTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCAGACTTGACTATTGGTCCAGTTCTCACTGTTACAACAGAGACAATGCT AGAACACGTGAATAAATTACTTGAGATACCAGGGTCAAAGCTTCTCTTCGGTGGTCGACCTTTGGAGGACCATTCAATTC CATCAATTTATGGTGCTATTAAACCAACTGCTGTTTATGTTCCTCTTGAGGAAATTGTGAAGGATAAGAATTATGAGCTA GTTACAAAAGAAATATTCGGACCTTTTCAGATTGTTACTGACTACAAAAGCAGTCAACTATCAATTGTGTTGGATGCTTT GGAGAAAATGCATGCCCATTTAACTGCTGCTGTAGTTTCTAATGATCCTTTATTTTTACAGGAAGTAATTGGCAAATCAG TCAATGGTACTACTTATGCTGGTCTAAGAGCAAGAACAACTGGAGCTCCACAGAATCACTGGTTTGGACCTGCGGGTGAC CCTAGGGGTGCAGGAATTGGAACACCAGAAGCCATAAAACTAGTGTGGTCTTGTCACAGAGAAATTATCTACGATATTGG ACCTGTGCCAGAACATTGGGAAATTCCTCCATCAACTTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0247100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLGDVTTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAQGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWP YGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHNCGLPAEDVDFINSDGKAMNKLLLEANPR MTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFVHENWSKTSLISK LKDLAERRKLADLTIGPVLTVTTETMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIVKDKNYEL VTKEIFGPFQIVTDYKSSQLSIVLDALEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGD PRGAGIGTPEAIKLVWSCHREIIYDIGPVPEHWEIPPST
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43521:SF4
2 439 438 1.1E-231 –
PANTHER
PTHR43521
2 439 438 1.1E-231 –
Gene3D
G3DSA:3.40.605.10
3 197 195 7.2E-35
IPR016162
SUPERFAMILY
SSF53720
17 406 390 1.27E-48
IPR016161
Pfam
PF00171
19 381 363 1.3E-38
IPR015590
Gene3D
G3DSA:3.40.309.10
198 381 184 5.1E-18
IPR016163
ProSitePatterns
PS00070
213 224 12 -
IPR016160

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0247100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…