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LotjaGi4g1v0247100.3

Overview

Field Value
Gene ID LotjaGi4g1v0247100
Transcript ID LotjaGi4g1v0247100.3
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT5G62530.1 aldehyde dehydrogenase 12A1; Swiss-Prot: sp|Q40255|ALDH_LINUS Probable aldehyde dehydrogenase; TrEMBL-Plants: tr|V7CDG3|V7CDG3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0247100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:59839958..59846083) extracted from Lotus japonicus Gifu genome v1.2.

TATTTTCATTATACAATTTTTAAAGCGAAGTCTAATTATGTGTTTTGAGCGCTAAATTCATTTCTGCAATGTCCTGCAGG TATGCTCATTCATTACAGTTTGCTACTGTAGAAGCAGAAGAGGTATCAGGCTCAAGGCCTGCTGAAGTTTTGAACTTGGG TAGGTCTCACAACCTCTGATGTTTTTGTCATTTTCGTACAGGCATTACTATTCTTAAGAATAACATAATACTCGTGATAA TGTTGATGAATAAAGACTGTAAAAGGTTGCTGTTGTTAAAATTTACTTGTTTTATTTTTTCCCTATGATTCTGTATGTAA GGTGTCAAACCTGCTGTTCAAGTATTTAGGAAACCATTTCTTTTCTTCATTTATTCATCAAAGTCTGAATTATACTAAGT GATGTTGTAAATTTCTGCACAACATGTTTTTCAATTAACTCAACTTAAATTAAACTTATTGTGCCATGCTTCATTGACTA TCGCTGTGTATGTGTTGTTGTCACTTTCAGTGCAGGGTAAATGGGTAGGATCTTCAAACTGTAATACAATTGTGGATCCT TTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAGCGGGCATTCAGGTACATCTATAATTAAGTATTTGTCT GGTTGGCTTAATATTTTATATTGAGATGTGTTCCTTTTTGTTGCCCATGCTGTTGAGTTTGAATTCAACTAATATGTATT CAAGGATGTACTCTTTTATTACTTCCTCTGTTCCTCATTCATTGTGTCTTTCGAACTAATAAATATTGAGTGCCTCAGGC ATTGTTTATCAATCACCACTCAGCAGAACTGTTGTTTCAATATGATGTTGAAGTCTTAACCTCTGTGTGTGAGACAGGGT TCTCACCATTTTATGAGAAAGAAAGAAAATCAGTTTGACGGCTATTGATGGGTCGTTGATTGAAATTCAACAGTTGTTTT GAGACAGAGATCTTGACTAAAATTTAACTTTTGTTTGACATATCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAGC ATGGTTTACACAATCCTTTTAAGGCACCAGAGAGGTATGTGCAGATTGAACTTCTTATTTTCTCCATTTCCTTTCTAGAA ACATATAAAAAGTTCCTCCCCCCCTTGGATTAATGATTGTCATCTAGGTCAAAAAACCACAAATTGCAGGCCACCTCATC CTTTAATATAAAAACTCTGCCTTTTGTTGTCTATTATATGATATTGTTGTCCAAGTGGGTTCTTTTGCTGAGGGAGGATA TAGACTATTCCTGGAGGTTTTGGCCTTTTAACAATGATACAAATTTACATTTGGATAGAAAACAATACAACACAACAATT TAGTTACTTTCTTTTTGAAATAGAATGTGAGGTGATTTTCAGATGGTTGGTTTGCAAGGTGTTAAGGGAAGTGCTAATCC TTTTCTTTTATGTTTCCAATTCCAATTTTTGTGGCTAAACAAGGATTGGATTACAGAATGAACTTTCACCTTTCAAACTT TTGCTAAGAGGAGGAACTAAGGGTTTGAGGGAAATAATTTTTTTTTTCATCTCTTGCTTTCTTTTTGAATTACAAAAACG CCACTTCTTTCTGAAGCTACCTAAGATAAGAATGAGAATAAATAAACATTTTACTGTCAACATTTGTCATTTTCACTTCA AGAATGCAACCAGCTCATACATTTGAGTTAACGTGACATGAATCCTCATAATCATATTTTGGCCATCCCTATTAAGTCTG AAGTAGGTATTTTTGACAAACCTTATGCAGATATCTTATGTTGGGAGACGTAACTACCAAGGCAGCTCACATGCTATCGC TTCCTAAGGTATTTCTAACAAATTTTTTTATATTACTTTATTGAATTTATGAGAGATTAGAAAGTTGTTTAATCCATGTA ACCAACCATATCTTGTCGGCGAAGACTTTGGCTGTTGTATGTTACTTGATGGAGTTATGTTGTCACCTGTTGCATTCAAA TCTACTAAACTTGATGTAAATTATTCTGCGTGACTCTCAGGTTTCAGATTTCTTTACAAGGCTTATACAAAGAGTTTCTC CAAAAAGTTACCAGCAGGCTCAAGGGGAAGTTTATGTGACACAGAAGTTTCTGGAAAATTTTTGTGGAGATCAGGTACAT CAATATAAAAGACATGTTTGGTGCTAAATTAGTGAAATCCCAATTCCCAAGTACAAATATGTCATTCTCTGATATGGAAT GATGGTAGAACCTAAATTGAAAGTCATCTATATCAAAATAAGACATGTTGGTGCTAAATGAGTGAAACCTCAAGTACAAA AATCTACTCTGATACAGAATTACGGAACAACCTAGATTGATATTCATTTTTTCTTGGTTACCCTTGACTGGTAGATTTGA TCATTTTCCTTCTGAATTCTATCATTGAAGCCTGGATTCATCTTTACTAGAATAGTTTAACCCTGGCACGCATACACACT ACACACAATGAACTAACATTTTCTTATGTGGTTTCCCTATTGAAGTACAACGTTCATACCATTCCTTTAGTAATTTCTTC TTTGTCCTTGTTCATTTCAAAAAATCCTTGGCAGGTTCGGTTCCTGGCAAGATCTTTTGCAGTACCTGGAAATCATCTTG GGCAACAAAGCCATGGTTTTCGTTGGCCATATGGTCCGGTAAGGATTACGTTTTATTTTAGTTTAAATTGGGATAACTTG TTCTGAAGGGAAAAAATAGTGTCAGTCTCACCATGTTTTATTTCTGATTTGGAATTGAAAGTGCACGTGAAGCTGTTGCG AAGTTCCCCTTCCAATACCTGTGTAATCCTAAAGCTGAAAGTGTGTTCTGCAGGTGGCAATTATTACTCCTTTTAATTTT CCCTTGGAGATTCCAGTCCTTCAGTTGATGGGTGCACTTTATATGGGAAACAAGCCAGTCCTTAAAGTCGATAGCAAGGT AACTTTCAGCTCTGATTTTGGCAGACTTATATGACATCACATCTAATACAAAATTGATATGAGTAGGCTAGCTTCTAGAC TACATGAAATATGAATAACAGTTAGTTATGGTAAAAATAATTGTGATTATATTATGTTAGGTTTTGGTTAAATTAATTTT ATTTGAGATTCAAATATTTATGTACTTGACTCTGAATTATTAATTTGAATTATTGTAGGTGAGCATTGTTATGGAACAAA TGTTGCGCCTTCTTCATAACTGTGGTTTACCGGCAGAAGATGTAGACTTCATAAATTCTGATGGGAAGGCAATGAACAAG CTGTTACTGGAGGTTGGTTGTTTGGTACCTTCTTTTTGGCATGCAGAGGATTCTGTAAAACAATATTGTTCCCGAAATAT TACCGCTTCACTTTATGGTTTCACCTCATGATTATCTCAACTTTCAAGTCATATTGTTGACCTTATAAGATGTTATTGTC TTTTGAGCTCCTTTATTTTGTGATAATCATATATTTGTATCTGTATGCGACTACATGTTCCTCTCACATAATGATAACGA TGTTGTGTTTTTACAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTTGCAGAGAAGTTGGCTGGTGATT TGAAGGGCCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGTTTCTTACGAT TTTTTTGTGGATTTCAGAATGGTATTGACTCAGTATTCAGTTCTATAATAGTTTATCTACTATTTTTTTTATTGCAGGAA GATTACATTGCATGGGTCTGTGACCAGGATGCATATGCATGCAGTGGTCAGAAGTGCTCGGCACAATCATTGTTATTTGT GCATGAGGTCAGTTATTCGTGGTTAAATATCCTCAAGAACTAGGGTGAAGTTGTAATGTTGAAGTATTTTGATGCATCGA CTTTGCTAACTCCAGGGTTTTGATCTCCATTTGTGCAGAACTGGTCTAAGACATCCTTAATATCTAAGTTGAAAGATCTT GCTGAGAGAAGAAAGCTAGCAGACTTGACTATTGGTCCAGTTCTCACTGTAAGTATTGATGTTTATTTATTTTCGCCCTT TGTATATTGATCTAGGATTTAACATTTAAAACTGTTTCGGTGCCCCCCCACCCTTGAAGTTTATGGAAGTTTTCTCTTTA AGGTGTTTAAAGTCAAATCTGCTTTGTAATCCTTTTTTAACTTTACATGAATGGAGTATAGAGTATTTCCGTAAGTTACG CGCAGTAGTTTTAATGATCATCAACCCTTTTACTTCACAATATGAAAGATCATGCTTAGAGAAGAAAGCTAGTGGACTTG ACAATTGGTCCAGTCCTCACAGTAAGAATGTTTGTTTCCTCCCTTTTATCTAGGATTTGACTTTTAAAATTGTTTTTGTG GACCCTTTGAAGTTTATGAAAATATTTTTGAGGTGATGAAAGTGAAAACAACTTTGGAATTCTAGACAAGCTATATGCAA TAGTTTTAACGATTGTCGTCCCTTCTACGGAAAAATATAGACAAGCTACCCATGCTTTTGTGTAATAGTTAAGTCACTGC TTTCAGGTTAAATACCAAATCCTGCCAGCTATCACAGTTGATTTGTCCTCAGCCATTTAGATCTATTTGCTTTGAATTGA TTAACGGAACTGTAGAAGTTTGGACACTGATTTGTGTTCATTTATTTATATAATTTGATTAATGGTAGTATAGTACATCT GTGATAATGACTCAAATTTAGTGTTTGTGTGTTGTTAGCTGATGTAGGTTCTAAATTATTTGTTTGACGTTGTTGGTGGA TGCTGAACCCTTATATATAAAAGAATGAAGTAGTTTTTAATAAACCATTTCTTCCTGCAACCATCCAGGATGGTATAATA TTTTATTTAGTAGCTAATTTGCCAATTCATTGCTGGCAGAACAATTACAATTGTCTACTTTCTTTCATGAAATGCCAGGC TTGAAATTCTTAATTTTTCTTTTCTCATATGTTGCAGGTTACAACAGAGACAATGCTAGAACACGTGAATAAATTACTTG AGATACCAGGGTCAAAGCTTCTCTTCGGTGGTCGACCTTTGGAGGACCATTCAATTCCATCAATTTATGGTGCTATTAAA CCAACTGCTGTTTATGTTCCTCTTGAGGAAATTGTGAAGGATAAGAATTATGAGCTAGTTACAAAAGAAATATTCGGACC TTTTCAGGTAATGAAAAAGGAGACTTGGAGCATGAAAATAGACTTCTGAATTCTCCTATGCCTTCATAATATCAGTCTGC TCTTATGGGGAGATAAATAATTTTTATTTATCTTTGCAGATTGTTACTGACTACAAAAGCAGTCAACTATCAATTGTGTT GGATGCTTTGGAGAAAATGCATGCCCATTTAACTGCTGCTGTAGTTTCTAATGATCCTTTATTTTTACAGGCAAGATTTT TATGATTCAAAATTTTCTTGCTATGGATGTATGTAGTATGATGCAGTTATCAATTCTTAACCAGGTCTCAATGTTTATAT CAAATCAGAAACTAAATACTCTGTTGATTTTATATTTCATTCATGAAACCACGTTATAGTTGTTTAGGATAATGTGTAAA AGTATATTCTACATATAAAATCAATTGCTTGCAAGATTTTTGTGGTAAATAATAGTTTAACTCCTCTGAAGTTGAAATGT CCCACGATTTCTCATATATCCAACATGCTACTTGCTTGTAAACCACATAAATGAGTGAATTATCTTTTGTAATTTTTTCA TAACTGTGTTTTATTATATATATGCTGCATTGTGTATCTGATTATTTGCTGCTAAACATTTACAGGAAGTAATTGGCAAA TCAGTCAATGGTACTACTTATGCTGGTCTAAGAGCAAGAACAACTGGAGCTCCACAGAATCACTGGTCAGTGGATTTTGT TAACCTGATTTTCTTGTAGGTTATAAAAAATTGATGTTTCAATATATTGAAAATAATGTTATTGTAGGTTTGGACCTGCG GGTGACCCTAGGGGTGCAGGAATTGGAACACCAGAAGCCATAAAACTAGTGTGGTCTTGTCACAGAGAAATTATCTACGA TATTGGACCTGTGCCAGAACATTGGGAAATTCCTCCATCAACTTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0247100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCCTGCAGGTATGCTCATTCATTACAGTTTGCTACTGTAGAAGCAGAAGAGGTATCAGGCTCAAGGCCTGCTGAAGT TTTGAACTTGGTGCAGGGTAAATGGGTAGGATCTTCAAACTGTAATACAATTGTGGATCCTTTAAATGGAGACTCATTTA TTAAAGTTGCTGAAGTTGATGAAGCGGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAGCATGGTTTACAC AATCCTTTTAAGGCACCAGAGAGGCTTATACAAAGAGTTTCTCCAAAAAGTTACCAGCAGGCTCAAGGGGAAGTTTATGT GACACAGAAGTTTCTGGAAAATTTTTGTGGAGATCAGGTTCGGTTCCTGGCAAGATCTTTTGCAGTACCTGGAAATCATC TTGGGCAACAAAGCCATGGTTTTCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATT CCAGTCCTTCAGTTGATGGGTGCACTTTATATGGGAAACAAGCCAGTCCTTAAAGTCGATAGCAAGGTGAGCATTGTTAT GGAACAAATGTTGCGCCTTCTTCATAACTGTGGTTTACCGGCAGAAGATGTAGACTTCATAAATTCTGATGGGAAGGCAA TGAACAAGCTGTTACTGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTTGCAGAGAAGTTGGCTGGT GATTTGAAGGGCCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTA CATTGCATGGGTCTGTGACCAGGATGCATATGCATGCAGTGGTCAGAAGTGCTCGGCACAATCATTGTTATTTGTGCATG AGAACTGGTCTAAGACATCCTTAATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCAGACTTGACTATTGGT CCAGTTCTCACTGTTACAACAGAGACAATGCTAGAACACGTGAATAAATTACTTGAGATACCAGGGTCAAAGCTTCTCTT CGGTGGTCGACCTTTGGAGGACCATTCAATTCCATCAATTTATGGTGCTATTAAACCAACTGCTGTTTATGTTCCTCTTG AGGAAATTGTGAAGGATAAGAATTATGAGCTAGTTACAAAAGAAATATTCGGACCTTTTCAGATTGTTACTGACTACAAA AGCAGTCAACTATCAATTGTGTTGGATGCTTTGGAGAAAATGCATGCCCATTTAACTGCTGCTGTAGTTTCTAATGATCC TTTATTTTTACAGGAAGTAATTGGCAAATCAGTCAATGGTACTACTTATGCTGGTCTAAGAGCAAGAACAACTGGAGCTC CACAGAATCACTGGTTTGGACCTGCGGGTGACCCTAGGGGTGCAGGAATTGGAACACCAGAAGCCATAAAACTAGTGTGG TCTTGTCACAGAGAAATTATCTACGATATTGGACCTGTGCCAGAACATTGGGAAATTCCTCCATCAACTTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0247100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSCRYAHSLQFATVEAEEVSGSRPAEVLNLVQGKWVGSSNCNTIVDPLNGDSFIKVAEVDEAGIQPFVESLSSCPKHGLH NPFKAPERLIQRVSPKSYQQAQGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEI PVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHNCGLPAEDVDFINSDGKAMNKLLLEANPRMTLFTGSSRVAEKLAG DLKGRIKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFVHENWSKTSLISKLKDLAERRKLADLTIG PVLTVTTETMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIVKDKNYELVTKEIFGPFQIVTDYK SSQLSIVLDALEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVW SCHREIIYDIGPVPEHWEIPPST
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43521:SF4
6 88 83 2.6E-251 –
PANTHER
PTHR43521
6 88 83 2.6E-251 –
SUPERFAMILY
SSF53720
29 470 442 3.01E-51
IPR016161
Gene3D
G3DSA:3.40.605.10
84 257 174 2.4E-33
IPR016162
PANTHER
PTHR43521:SF4
88 503 416 2.6E-251 –
PANTHER
PTHR43521
88 503 416 2.6E-251 –
Pfam
PF00171
90 445 356 1.2E-37
IPR015590
Gene3D
G3DSA:3.40.309.10
258 444 187 1.8E-18
IPR016163
ProSitePatterns
PS00070
277 288 12 -
IPR016160

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0247100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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