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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0247200 |
| Transcript ID | LotjaGi4g1v0247200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY family transcription factor; TAIR: AT1G18860.1 WRKY DNA-binding protein 61; Swiss-Prot: sp|Q9LXG8|WRK72_ARATH Probable WRKY transcription factor 72; TrEMBL-Plants: tr|A0A151SL41|A0A151SL41_CAJCA Putative WRKY transcription factor 72; Found in the gene: LotjaGi4g1v0247200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:59860168..59864886) extracted from Lotus japonicus Gifu genome v1.2.
CATTGATGTTAGCTTAATTAGATATGGCATTGCTATAAAAATGATGCGCCAAAGACAAGGAAGAGAGACTAGATTAATTG CTTGACTCTCGAAGGGGAAGACCAAGAAACATACATACATAAATATATATAGAGGAAGGCTCCGGTCACCGGTTGTGGCA AAAGGTTTGACCTGAAAAACCATTGTTGTTGTTTGGTCCATTCCATGTGACTTTACAAAATGTACGAAACTTCAAAGATG GGCACCAATAATAAATTTTCTTTTCTTATTAATTAGTCAATTCTTTTCAAAAGTCAAACTCTTATGCAGGCCCTATCTCT CAAGGTTCTATATTAACATTGAAGGAGGGGCTTTATTTGAACACCTACAACGAAAGAAAACATATTTAGCAAGAAGGGAG AAAAGCCAGAAAGAAACGCCACCGTTTCATACATGGATCAGTTTGTTTCAGGGAGACCAGAGGATGGAGATTGTGGAGTA CTCAAGGAAGAGAAGAAAAGTGAGAATAGCGTTTGTGATGATCAAAGTTCTCATAAACAGGATACTGTTGTTGAGGTGAA GATTCTTTCTCTCATATTAGTCATATATAATTAAAAGAAAAATAATTTTTCTTCTGATCTATTTTGTTTTTCTTCATCTA CAATTCATTTTGTTCATAGTAATCTGATAATTATCATCTATATATCTATAATGGAACCATCTACAATTAACATATACTAT AGTTGTCTTTTATTGCAAAGACCTACAGTATAACGTCATAACATGTTATTTACAATATGTTGTTTATGTGTTAAAATTAA TTTACAGAAAAATCATTATAACTCATGAATAAAGTTTCTTAGTTCAGGAAGATAATTGATCTTGTGAGCGAGGCATTTAA TCTTTAAAAAGCTGAATTAGTTAGGGCATACTGATTAATAGATATTATGTTAAAGGGTTTTAGTTTGCTTGTCCTCTTGA AACAGGTTCTGATTCTTAATTTTATCTTATCGATCACCAAGTACCATGATCATACGTAATTAACAACAATTTGTTAAATG TTTATCCTAAAATCATCACCTACAACATTAATCTATAGTAATTTGTTTGGTACAACGCATACTGAAGACCATAAACAAGT TTAAAACTTCTACTTGTCATAAAATATGATTTAACTGTTGACATAAAACAAAAAAAATGGATGCTGTATCTACAACTTGA CAAGTACATGTTATACTAATATTGAATTAGTCAACACGAAATTAGGATAAGATTTAAACAGAAAGGAAGCGTCAGCATGG GAAGTAATATACAAATACATGCATGTCATGTCATTTGCAAAAATCTATTGAAGATGCTTACCATTTTGTGGCTTAAGACT GCTAAAAGGGTTTCAACAATTAATAGCTTTGATAAGAGTTGACTCATGCATGTGTGTAGTTTCACTTTCACCCTGCACAT GTACTTGAATACACTTGCTCACAGTTTTATCCTAGATATTCCTCTACTTGAATTTTAAATTTCCTTTTTTCTATGCTTGC ATTTAGGAATACACTCCCAATTTTTCTTTTCTTTTAGAACAAATCAAACAAGGAATAAATATTAAATGTTTGTTTTTGGA AACCCTACAATTTATTTTGATTTCAGAATCAATTTTAAAGAGAAACTTATGTGAATAGCTAGCTTGTGAGTTTCATAATT ATTTTTATTGATTTTGATGAAAAATAAGCTAATCCAAATATCTATACTTATAAGTGTGTTTGATTATATATTTACACACA CTTCAAGAAAAAGTGAATAAAAATCTTTTTATGAATTTATACTTAACTGTATTCAAACATACACAAAGTAGATAGCATAA ACCAAATTGTATACTTGGATTTCATGAAAAATAAAGGGAAAAGTATTAATTAAGGAGAATTTGCATTTGTACATGAATGC TAATTTGATGATTACATATATATAGGAGCTACCCATTGCAAATGCTGAAATGTCCATGGTGGAGGCTGAACCAAGCGCAT CCCCATCCATGAAGGAAGATGAGGTAATATAATTTGTATGATACATTCATGAGTATTATTTTGTTCTCTCATTTTTCCCT CTTAAGAAGCCAATTAAAGAAACTAATCATGAAGATATTGTACTAATTGCAGGTTGATGATCAGCTTGAGATTACTAAAG CCCAAATGGGCGAGGTGAGAGAGGAAAATCAACGGTTAAAGATGAGCTTGAACAAAATAATGAATGAATACCGGACACTA GAAATGCAATTCCAAGATATAGCTAAGCAAGATCAAACAAAGAAGAATATTGTGGCTGATGATAATAACCATCAAGAAAT AATGGAGGAATCAGATCTTGTGTCCCTCAGCCTTGGAAGAGTTCCTAGCAATCCAAGAAATATCAAAGTCTCTAAACCAT TGAAGGATCATGAAGAGTTTAATGAAGACTTGACTCTTGGACTAGACTGTAAACTAGAAACATCAAAATCTGGGAGCACA AATGAAGCAGCTTTGCCAAATCCAAGCCCTGTCAATAGTTGTGAAGTGCCAAAGGAAGAAGAAGCTGGGGAGACTTCACC ACCTACTACTAAGGCACCACTCAAGACCATGAGAGATATTGAGGATGAAGTTGCTCAACAAACTCATGCAAAGAAAGCTA GAGTTTGTGTTAGAGCAAGATGTGATACCCCCACAGTAAATCTTTCTCCTCTCATCAGCTCAATCATATTTTCTTAATTT AATTAGCATCTATATATATATATTTTTTTGGTAACTAGTATCTATATATAATGATCACGTTGACACTTTCATTCAGCTCG GGATCACGCCTCTCCTAATTTTCTATCCCGGCACAATTAATATCTTTTGTCTCCATTACTTTCTATTTTTCGTGTCTCAC CAATAAAATGTTGTCACATTAATTAAAAACTACCATTCAAGGTTCATAACCAACTCACCCATGTTGTTTTAAGCAACATG TCAAAATTTCATTGATACCACATAAAAAAAGGATAGAGAATGAGACATGCAAAAGATTTTCATCACTGATTTGATCCTTA AACAGTTTTAAAATGTGGAAATCTATATGTATACTTGTTAATCCTTTGATTTGTTGAAAACAGATGAATGATGGGTGCCA ATGGAGGAAATATGGACAAAAGATTTCAAAGGGAAATCCTTGCCCGCGAGCTTACTATCGTTGCACCGTTGCACCATCCT GCCCAGTAAGAAAACAGGTATATATATATATGAAGATGCATATTACACTCATTGTCATTGAGTTTCAATTTGTAACAAAG TTGAAGCTATTTTGCGATAATTAGACACTCAAACAAAACAGTACAGACTACAAACACTTCACATACATCTTATTTTTTTC TCCATTTCTCTTATAACATCACATCATTAATCACATCAATTATCTTTCTATCTTCTTCTATTCTTTTCTCACTCGAGATG TCTAGGTGAATTCGTGATATTTTCGTTATTAATATGCATCTCATGTATACATGTTACAAATTTTCAGGTGCAAAGATGTG CTGAGGACATGTCCATTTTGATCACCACCTATGAAGGGACACACAACCACACTCTTCCTCATTCAGCAACCGCCATGGCT TCCACAACCTCTGCAGCTGCTTCCATGCTGTTATCCGGTTCTTCAACCTCTTCAACCACCAACAACAACCTCCATGGCCT CAACTTTTATCTCTCATCAGACGGTTCCAAATCAAAGCAACTACACCACCTATCCAACCCTGCACTCTCATCATCTTCAC ATCATGACCATCCAACCATCACTCTTGACCTCACTACAAACCCAAACTCTTCCTCATCATCATCTCCCTTTGTTAGATTC AACAACCAACTCAGATACCCTTCTTCCACCAGCCTCAGCTTCAACTCCTCCGAGTCCAATGCAATGTCCTGGACCAATAA CGGCTTCCTCAACTATGCTACTCATCAGCCGTACAACAACAACAACAGGAACATCCTCAGCTCTGTAAATTTTGGAAGAC AACAAGCAGCAGAAAATATCTACCAATCCTACATGCAAAAGAACAACAACATCAATTCAATCCCTCCTTCTCAATCAGAA ACTGTATCTGCAGCAACAAAAGCAATCACTGCACACCCCAATTTTCAGTCTGCATTGGCAGCAGCACTTACTTCATTCAT TGGAAGCAGTAACACACCAGGAAATTTGGGTCACAAAATGACATGGGCAGAGCTGTTTCCAGCAGCGTCTAATTCTACTG CTACATTGCCTTCAACTTCTAAAGCTTCTGCATCAAACTTCTTCAACAAAACGCCTTCATCTTTGCCGTTTTCTACCCCC AAAAGCGCGTCTGCGTCTCCTGGTGATAGTAACGGCAACACAGATTAATTCTTGACCTGAGAAATAGTCAAGAACAAGAA GTACACTGCATGTTTTTGCCAAATGCTGGTTATTTTTTAAAAAGTCAAAAGCTTGGCTTTATAAAAAATAACCAGCTATA TATATATGCAGAAAGTGTTGGAACATTGTTCAAAGTGATTCCATTCAGCTCGAAACTTTCATTTTAGCAGAGTGTATGTT AGTAATTTTTTGTCAACGCATTGTTCAAATTAAGTGATTCTGTTTAGCTAGAAACTTTCAGAATAAAAATTCTCTTGATT ACATTTTATTACATTCATCAAAATTAGAAGCCTCATTTTTTGTATCTATATTTTCATTAACACCTTATATTCTCCTTTA
CDS sequence (LotjaGi4g1v0247200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAGTTTGTTTCAGGGAGACCAGAGGATGGAGATTGTGGAGTACTCAAGGAAGAGAAGAAAAGTGAGAATAGCGT TTGTGATGATCAAAGTTCTCATAAACAGGATACTGTTGTTGAGGAGCTACCCATTGCAAATGCTGAAATGTCCATGGTGG AGGCTGAACCAAGCGCATCCCCATCCATGAAGGAAGATGAGGTTGATGATCAGCTTGAGATTACTAAAGCCCAAATGGGC GAGGTGAGAGAGGAAAATCAACGGTTAAAGATGAGCTTGAACAAAATAATGAATGAATACCGGACACTAGAAATGCAATT CCAAGATATAGCTAAGCAAGATCAAACAAAGAAGAATATTGTGGCTGATGATAATAACCATCAAGAAATAATGGAGGAAT CAGATCTTGTGTCCCTCAGCCTTGGAAGAGTTCCTAGCAATCCAAGAAATATCAAAGTCTCTAAACCATTGAAGGATCAT GAAGAGTTTAATGAAGACTTGACTCTTGGACTAGACTGTAAACTAGAAACATCAAAATCTGGGAGCACAAATGAAGCAGC TTTGCCAAATCCAAGCCCTGTCAATAGTTGTGAAGTGCCAAAGGAAGAAGAAGCTGGGGAGACTTCACCACCTACTACTA AGGCACCACTCAAGACCATGAGAGATATTGAGGATGAAGTTGCTCAACAAACTCATGCAAAGAAAGCTAGAGTTTGTGTT AGAGCAAGATGTGATACCCCCACAATGAATGATGGGTGCCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGAAATCC TTGCCCGCGAGCTTACTATCGTTGCACCGTTGCACCATCCTGCCCAGTAAGAAAACAGGTGCAAAGATGTGCTGAGGACA TGTCCATTTTGATCACCACCTATGAAGGGACACACAACCACACTCTTCCTCATTCAGCAACCGCCATGGCTTCCACAACC TCTGCAGCTGCTTCCATGCTGTTATCCGGTTCTTCAACCTCTTCAACCACCAACAACAACCTCCATGGCCTCAACTTTTA TCTCTCATCAGACGGTTCCAAATCAAAGCAACTACACCACCTATCCAACCCTGCACTCTCATCATCTTCACATCATGACC ATCCAACCATCACTCTTGACCTCACTACAAACCCAAACTCTTCCTCATCATCATCTCCCTTTGTTAGATTCAACAACCAA CTCAGATACCCTTCTTCCACCAGCCTCAGCTTCAACTCCTCCGAGTCCAATGCAATGTCCTGGACCAATAACGGCTTCCT CAACTATGCTACTCATCAGCCGTACAACAACAACAACAGGAACATCCTCAGCTCTGTAAATTTTGGAAGACAACAAGCAG CAGAAAATATCTACCAATCCTACATGCAAAAGAACAACAACATCAATTCAATCCCTCCTTCTCAATCAGAAACTGTATCT GCAGCAACAAAAGCAATCACTGCACACCCCAATTTTCAGTCTGCATTGGCAGCAGCACTTACTTCATTCATTGGAAGCAG TAACACACCAGGAAATTTGGGTCACAAAATGACATGGGCAGAGCTGTTTCCAGCAGCGTCTAATTCTACTGCTACATTGC CTTCAACTTCTAAAGCTTCTGCATCAAACTTCTTCAACAAAACGCCTTCATCTTTGCCGTTTTCTACCCCCAAAAGCGCG TCTGCGTCTCCTGGTGATAGTAACGGCAACACAGATTAA
Protein sequence (LotjaGi4g1v0247200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQFVSGRPEDGDCGVLKEEKKSENSVCDDQSSHKQDTVVEELPIANAEMSMVEAEPSASPSMKEDEVDDQLEITKAQMG EVREENQRLKMSLNKIMNEYRTLEMQFQDIAKQDQTKKNIVADDNNHQEIMEESDLVSLSLGRVPSNPRNIKVSKPLKDH EEFNEDLTLGLDCKLETSKSGSTNEAALPNPSPVNSCEVPKEEEAGETSPPTTKAPLKTMRDIEDEVAQQTHAKKARVCV RARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDMSILITTYEGTHNHTLPHSATAMASTT SAAASMLLSGSSTSSTTNNNLHGLNFYLSSDGSKSKQLHHLSNPALSSSSHHDHPTITLDLTTNPNSSSSSSPFVRFNNQ LRYPSSTSLSFNSSESNAMSWTNNGFLNYATHQPYNNNNRNILSSVNFGRQQAAENIYQSYMQKNNNINSIPPSQSETVS AATKAITAHPNFQSALAAALTSFIGSSNTPGNLGHKMTWAELFPAASNSTATLPSTSKASASNFFNKTPSSLPFSTPKSA SASPGDSNGNTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 38 | 38 | - | – | |
| MobiDBLite | 12 | 37 | 26 | - | – | |
| PANTHER | 14 | 563 | 550 | 1.3E-166 | – | |
| PANTHER | 14 | 563 | 550 | 1.3E-166 | – | |
| Coils | 72 | 113 | 42 | - | – | |
| MobiDBLite | 179 | 216 | 38 | - | – | |
| Gene3D | 233 | 311 | 79 | 5.1E-32 | ||
| SUPERFAMILY | 242 | 310 | 69 | 1.96E-26 | ||
| ProSiteProfiles | 244 | 310 | 67 | 27.887 | ||
| SMART | 249 | 309 | 61 | 3.0E-35 | ||
| Pfam | 250 | 307 | 58 | 1.2E-23 | ||
| MobiDBLite | 357 | 393 | 37 | - | – | |
| MobiDBLite | 530 | 572 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi4g1v0247200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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