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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0250400 |
| Transcript ID | LotjaGi4g1v0250400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Galactoside 2-alpha-L-fucosyltransferase-like protein; TAIR: AT2G03220.1 fucosyltransferase 1; Swiss-Prot: sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase; TrEMBL-Plants: tr|A0A072USA9|A0A072USA9_MEDTR Galactoside 2-alpha-L-fucosyltransferase-like protein; Found in the gene: LotjaGi4g1v0250400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60376119..60379781) extracted from Lotus japonicus Gifu genome v1.2.
CACAACAAACACCTATTTATAATAATGAAACAGAAATGTGTACGAGATGAGAGGTGATGCAAAGCGCGTGTTGCTGTCGC CACGGCACCACTGTCACACTCTCACTCTGTCTCTCTGGTCGATGCTCGAATCCCCCAAACTCTCTACTCTGCTCTCATTC CATTCCAACACTCTGATCAACCACTCACGTGCATTGTTCTGCTGGTGCCGGATGATGATGCAGAGGGTCACCGCAATCAG GAACCCTGAAGAAGGTGGCGGCGGCGGCGGTGATGCCGACAAAAATCACCACCACAACCTCTCACTCTGGGAAACCTTTA ACAGCAAATGCAATGTCTTCCCTCTCAATCTGATGCGTTTGATGGGCTTCTTCGTCCTCTCTTTCATCCTCTTCTCCGTT CTCTTCTCTCTCTCCGTCGTTCTCCGTGACCCTCCCTCCGATGCCGCCCTTCACCAACCACCACCGACAACAACAACCAC CACTGTTTTCCATCTCAACCAACCACAACAAGGTATTTACCTCCTGATTTTATACTTAGTTCCATTGCCACTTCATCTTA CAAAAAAATGAATTAGGGTTGTTCAATTTAGTTGATTTTGGCACTTACCTTGTAAATCACATTGTTATGTTGCCTAGAAG ATGGAGCAGAATCTAGATTTTTGTCTTCAAGTAACTACCCATTGCCATCTTTGTCTTGCTGCTATGTCTTTTTCCTTCTA ATTGTCTTTTCCTATGTTTTACATTGTGGTAGGGATCACTGTTAGGTTGAATTTCTTGATATTGCATAAAATTGCAAATA AATATGGCTGGTGTACCCACAAGTGTGATCACAATAGGAAGGTCACAAAAACCTTCACATTTTGGCTGCAATTTTTGATT GCGGCAGACCGTGATTTAAAACTGCTCAAACAATATGCTGTCCTGATGATTTATACTTGTGTTGGTTCTTAGTTTTTGTT TGATGGATGCATTGCATTATTGTCATAGTAAGAGGTTCTTTAAGTTAGGTAATTAGACGACAACCTAGAAGAGTTAAAAC AGAGAAAAAATGGTTATTTTAGAATGTGACAACGGTCTCGTTCCGAATTTGGAAACTTTCTTTAAAAAGTGGTCCTTCTT GAGATGTTTTCTTTTCCTGCAGCTGCATCTCATTGTTGAGTTACGGAGTTTCATCTTCTGTGGCTTGTAGGTTTGGACAA TGATGCCTTTGATTCTGCTGAGTTGCTAAAGGATAAACTGCTCGGTGGCCTTCTAGCTGATGGGTTTGATGAAAAATCTT GTCTCAGCAGGTATCAGTCAGTTATGTATCACAAGGGACTATCAGGAAAGCCTTCTTCTTACCTTATTTCTAGATTAAGA AAATATGAAGCTCTACACAAAGAATGCGGACCTTATACCGAATCCTATAATAAAACTGTGAAACAACTCAGGTCTGGTCA ATTTACTGAATCCCCAGCTTGTAAATATGTAGTGTGGGTTTCATTTAGTGGGTTAGGGAATAGGATATTGACCCTAGCTT CTGCATTTCTCTATGCTCTCCTCACAAACCGAGTTTTACTGGTTGACCCTGGAGTGGATATGATTGATCTCTTTTGTGAA CCGTTTCCAGATACATCCTGGTTTCTCCCTCCCGATTTTCCTCTCAACAGTCAACTAAATAATTTCAGTAAGGAATCTCG TCAATGCTATGGGAAAATGCTGAAAGAAAAATCAATTACAAACTCCACCGTGCCATCTTCTGTCTACCTTCATTTAGTCC ATGATTATGATGATCATGATAAGCTTTTCTTCTGTGATGAAGAGCAAGTGTTTCTAGATAAAGTACCTTGGTTAGTGATG AAAACAGATAATTATTTCGTTCCATCTCTATTCTTGATGCCATCTTATGAGCAGGAACTGAATGATCTCTTCCCAAAGAA AGCAACAGTGTTCCATTTCTTGGGTAGATATATGCTCCACCCCACAAACAATGTGTGGGGACTTGTTGTCAGATACTATC AAGCTTATTTAGCTAAAGTTGATGAAAGAGTAGGCATACAAATTAGAGTGTTTGTTCCAGAACCTGGTCCATTTCAACAT GTTCTGGATCAGATCTTAGCTTGTACTTTGAAGGAGAATCTTTTACCCGATGTTGACCGTGAGCAGAATAATATTAGTTC ATCTGGACTACCAAAGTCAAAAGCTGTGCTCATGACATCCTTAAGCTCTGGTTATTTTGAAAAGGTAAGAGACATGTATT GGGAGTATCCTACCGTGACAGGAGAAGTGGTCGGCGTTTTCCAGCCAAGCCATGAAGAGTATCAGCAAACGCAGAAGCAG ATGCACAACCTAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACAGACGTGTTGGTTACTAGCTCGTGGTCTACTTT TGGCTATGTGGCTCAGGGGCTTGGAGGTTTGAAACCATGGATACTCTACAAACCTGAGAATCAAACCGCTCCGGATCCTC CTTGTCAACGTGCCATGTCAATAGAGCCATGTTTCCATGCTCCTCCCTTCTATGATTGCAAGGCTAAGAGAGGAATTGAC ACAGGTGCACTTGTTCCTCATGTAAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAATTGTAGTT AGCTAGTTGTGGTCCATGCCATGTATGCTATTTTAGGATAAAAAAAGTGTGGCAAATTTTGTTGTAAAATAGAATGAGTT ATTACTTAATCATGTATTCTCATTGAGAGTTTCCTTTTCTTTTTTTTGACAAGCATCAAGTTTTTATCATTGTTATATAC TCCAGGAGTTATGAGGCAGTAGGAAAATATTCCCTCACAACCATGCTTGATGATGTCACACTATGGACTAAAATTTGATC TTTTCTATCCATCTTGCTGGCAATATCACCTTAGCTTTTTTCCAATCCTAATGATACCTGCTAAGCATGTCAAACTCAAT GGTATTTGGGAAAGGAATTAACATCCAATAATTTAATCACAGAATAGTCAAGGTCGCTAATGAATGCTTTGAATATCAGC TTCAAGCTTCAATCTCTGGTTGTCTTTTCCCTACTCAACTACTTCACATTCCTTTGCCTTCCACGGTTCCACCACCATCT TCTGTATTTCTGTTTTGCCTTTCCATATTCTGCCTTCCACATCTTGTTGCAGCCGCCCATTTTTTGGTTGAGTGTTTTTA GAAGACTGCATGGCTCTTCTTGTCTTTCATTGACGCTTAATTCACCAACAGCACAATTGACGCTGCTTGCTATTAATGCC GCCATTCTGGAACAAGTTACAATACCAGCAGAACCAGATGAAGTTGTAAAAGTTGATGCGATGGCTAAGAAAGGAAGAAA AAATAATTTCTCATTCAGAAGTTAATGGTCTGGATTAAGTGACAATGAAGACTTGTGGAATTTATGGTATTTTTCTTGAG TGTTTTTCTTTGTTTGCTGTAGTTTTTATCTTCTGGATGGCAGTAGTTGGTTTGGTGGCTTTGCTTGAGCAAGCGTGCTT GTGCAAGTATCAGTCTGTTGTTGCATTGTTGTATTGCTCTGTGGGATTTTTGTTCCCTTTGATTGTAAGTGTCATTTGGC CTATCATTAATCAATCTACTAGAAAATGAACAGTATGGCATCCCTTTTGCCACCATATTCTGA
CDS sequence (LotjaGi4g1v0250400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGGTGATGCAAAGCGCGTGTTGCTGTCGCCACGGCACCACTGTCACACTCTCACTCTGTCTCTCTGGTCGATGCT CGAATCCCCCAAACTCTCTACTCTGCTCTCATTCCATTCCAACACTCTGATCAACCACTCACGTGCATTGTTCTGCTGGT GCCGGATGATGATGCAGAGGGTCACCGCAATCAGGAACCCTGAAGAAGGTGGCGGCGGCGGCGGTGATGCCGACAAAAAT CACCACCACAACCTCTCACTCTGGGAAACCTTTAACAGCAAATGCAATGTCTTCCCTCTCAATCTGATGCGTTTGATGGG CTTCTTCGTCCTCTCTTTCATCCTCTTCTCCGTTCTCTTCTCTCTCTCCGTCGTTCTCCGTGACCCTCCCTCCGATGCCG CCCTTCACCAACCACCACCGACAACAACAACCACCACTGTTTTCCATCTCAACCAACCACAACAAGGTTTGGACAATGAT GCCTTTGATTCTGCTGAGTTGCTAAAGGATAAACTGCTCGGTGGCCTTCTAGCTGATGGGTTTGATGAAAAATCTTGTCT CAGCAGGTATCAGTCAGTTATGTATCACAAGGGACTATCAGGAAAGCCTTCTTCTTACCTTATTTCTAGATTAAGAAAAT ATGAAGCTCTACACAAAGAATGCGGACCTTATACCGAATCCTATAATAAAACTGTGAAACAACTCAGGTCTGGTCAATTT ACTGAATCCCCAGCTTGTAAATATGTAGTGTGGGTTTCATTTAGTGGGTTAGGGAATAGGATATTGACCCTAGCTTCTGC ATTTCTCTATGCTCTCCTCACAAACCGAGTTTTACTGGTTGACCCTGGAGTGGATATGATTGATCTCTTTTGTGAACCGT TTCCAGATACATCCTGGTTTCTCCCTCCCGATTTTCCTCTCAACAGTCAACTAAATAATTTCAGTAAGGAATCTCGTCAA TGCTATGGGAAAATGCTGAAAGAAAAATCAATTACAAACTCCACCGTGCCATCTTCTGTCTACCTTCATTTAGTCCATGA TTATGATGATCATGATAAGCTTTTCTTCTGTGATGAAGAGCAAGTGTTTCTAGATAAAGTACCTTGGTTAGTGATGAAAA CAGATAATTATTTCGTTCCATCTCTATTCTTGATGCCATCTTATGAGCAGGAACTGAATGATCTCTTCCCAAAGAAAGCA ACAGTGTTCCATTTCTTGGGTAGATATATGCTCCACCCCACAAACAATGTGTGGGGACTTGTTGTCAGATACTATCAAGC TTATTTAGCTAAAGTTGATGAAAGAGTAGGCATACAAATTAGAGTGTTTGTTCCAGAACCTGGTCCATTTCAACATGTTC TGGATCAGATCTTAGCTTGTACTTTGAAGGAGAATCTTTTACCCGATGTTGACCGTGAGCAGAATAATATTAGTTCATCT GGACTACCAAAGTCAAAAGCTGTGCTCATGACATCCTTAAGCTCTGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGA GTATCCTACCGTGACAGGAGAAGTGGTCGGCGTTTTCCAGCCAAGCCATGAAGAGTATCAGCAAACGCAGAAGCAGATGC ACAACCTAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACAGACGTGTTGGTTACTAGCTCGTGGTCTACTTTTGGC TATGTGGCTCAGGGGCTTGGAGGTTTGAAACCATGGATACTCTACAAACCTGAGAATCAAACCGCTCCGGATCCTCCTTG TCAACGTGCCATGTCAATAGAGCCATGTTTCCATGCTCCTCCCTTCTATGATTGCAAGGCTAAGAGAGGAATTGACACAG GTGCACTTGTTCCTCATGTAAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAA
Protein sequence (LotjaGi4g1v0250400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGDAKRVLLSPRHHCHTLTLSLWSMLESPKLSTLLSFHSNTLINHSRALFCWCRMMMQRVTAIRNPEEGGGGGGDADKN HHHNLSLWETFNSKCNVFPLNLMRLMGFFVLSFILFSVLFSLSVVLRDPPSDAALHQPPPTTTTTTVFHLNQPQQGLDND AFDSAELLKDKLLGGLLADGFDEKSCLSRYQSVMYHKGLSGKPSSYLISRLRKYEALHKECGPYTESYNKTVKQLRSGQF TESPACKYVVWVSFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMIDLFCEPFPDTSWFLPPDFPLNSQLNNFSKESRQ CYGKMLKEKSITNSTVPSSVYLHLVHDYDDHDKLFFCDEEQVFLDKVPWLVMKTDNYFVPSLFLMPSYEQELNDLFPKKA TVFHFLGRYMLHPTNNVWGLVVRYYQAYLAKVDERVGIQIRVFVPEPGPFQHVLDQILACTLKENLLPDVDREQNNISSS GLPKSKAVLMTSLSSGYFEKVRDMYWEYPTVTGEVVGVFQPSHEEYQQTQKQMHNLKAWAEMYLLSLTDVLVTSSWSTFG YVAQGLGGLKPWILYKPENQTAPDPPCQRAMSIEPCFHAPPFYDCKAKRGIDTGALVPHVRHCEDMSWGLKLVDN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 104 | 104 | - | – | |
| PANTHER | 88 | 635 | 548 | 0.0 | – | |
| PANTHER | 88 | 635 | 548 | 0.0 | ||
| TMHMM | 104 | 126 | 23 | - | – | |
| Phobius | 105 | 126 | 22 | - | – | |
| Phobius | 127 | 635 | 509 | - | – | |
| Pfam | 151 | 606 | 456 | 5.4E-224 | ||
| Gene3D | 421 | 584 | 164 | 4.4E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Galactoside 2-alpha-L-fucosyltransferase activity | Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. |
Expression pattern of LotjaGi4g1v0250400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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