Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0251000 |
| Transcript ID | LotjaGi4g1v0251000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | response regulator 1; TAIR: AT5G61380.1 CCT motif -containing response regulator protein; Swiss-Prot: sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1; TrEMBL-Plants: tr|A0A0R0JWB0|A0A0R0JWB0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0251000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60463786..60468918) extracted from Lotus japonicus Gifu genome v1.2.
ATAGAGATGGAGAGTGAAGCTGAGGAAATTCTTAATTTGAATAGCAGAGAGAACAATTGTGGGGGAGCTAATAGTAAGAG TGGTGATGCTTTTATTGACAGAAGCAAAGTCAGGATTTTGTTGTGTGATGATGATCCCAAGAGCTCAGAGGAGGTTTTTA CCCTTCTTGTCAAATGTTCTTATCAGGGTATGTATGAGTCCCTTCCTTCCTTATTTGTTATTTAGCTGGTCTTTTGTGTG TTGTGTGTTTATGTTTTCTTTATTTAGTCAGGATTTATGTTTACTTGTGAAGATGAATTTTATTTGCTCATATGCCTTGT CTATAAGTTTTAAATTTGAATTTGCTTTGCTTGAAGTGTGACTGTGATTGTGAGTTCTCTGGATTCATTAGATGATAACA CTGATTTGGAAGTGGGCAACAATATGAAAGGGTAATTTAGGGTTGCTATTTTTATGTGTCAAATTTTAATTTTCATGGGA CCAAATTGCTGCCTTCTTGTTATTGAGTTACTTACTTCCACTCATTTTACAAACTCATTTTGTGTTGTCTGACCAAGTAT TTGTGCTTTCTTGACTGATTGATCCAAGTTATATTCTTTTCCTTGGGTGATCTTGGTTTCTATGTTGATTTTTATCTTTA AGAATCAGAGATCACAAGTATGATCACATACAGGAATAACAGGATTCTCCACTGTTGGAGTTCCCTTTCCCTTCCTCCTC CTTCATTTTTGACTTCTATGAATGAAAAAGTACCTTTGAATGTAATGATTTGATTGACTGCTTTCTATTTCTGCCGTCGG ATGCAATTCAACTTGTATGATTAAATCGTTTGGTTGTTCCTTGCGTGCTTTCTGAGATATGTTAACTACAATTTTTTATG CTCACAGTTACTCCAGTAAGATCAGCAAGGCAAGTAATTGATGCTCTCAATGCGGAAGGGCAATATATAGATATCATACT AGCTGAAGTTGACCTTCCAATAAAGAAGGGCATGAAGTTGTTGAAGTACTTATCACGGGATAAAGAATTGCGCCGAATTC CTGTTATAAGTAAGCTTTGATTCTTTATCTTCATAAGGAACCTGTAAGACTCTTTATTTTAGACAAATTATATTCTGTTT CCTCATTAATGTTGTTTATTTTCTATTTTTGGTCAAGTGATGTCTGCAAAAGACGAGGTACCAATCGTTGTAAAGTGCTT GAGACTTGGAGCAGCAGACTATCTAGTAAAGCCGTTACGCACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAA GGAGGCGCATGGTATGTGTTACACTACTTCATATTGATGGATGTTCCCCATCTCCTTTCCTTTTACTTTAGGGCTTAAGC TTTATGAATAATGAAGTGAAGGCTGTGGAGTAACTTACTTTGTGGACCGAAAGCACATCTACTTCATGCTGTCAATTTTT GTTATGAAACCAACATGTCCATTAAATTAAAAGAATTAGTCTGTGGAGATTTAAGTTATACGTGAATAACCTTTAATTAG TTTAAAATAAAGATATTATGCATAAAATTATAATATGTCCTAGTATTTTTCTAGTTTCTTTGTCAGATCTAAGGTTGATA CAATCAATCCACCACCACCCAGTTTCTGGGTTTTCTGGTTGTACTATTTTTTAGTTTATTGTTCTAAACATTTGATAATA GTTTTATTTTTTATTGTATTCTGCAGTTTTGGTATATTCTGTATTATATACTATGTTTTTAATATAGCCGCCATGCTTCC GCAATAGGCTGCAAGGCCATCTGCCTGATTGTTATGGTGGATTTTGGCTTACCGACATCCTTCATTGATAACATTGAAGC ATGTGTTAAAGTAAACTATTAACTTACAAACTAAGTACTGCTAAATGTCACATGCTGACAATATTAGTAAATTTAGTTGT TGATTCACTGTCGGTAAGTTAAAATTGAATCAAGATGTTCATTGAAGTACGTACTTAATGATCATTGCTTCTAACAGACG TTGATTAGTGGTTTCATTTCTTATGAAAAATTATTACATGATTTTATCATATCTGAAGAATATGGAAATGGAAGGAACCC ACCTCGATTTAAGAGAAGACTTCCATACACTCAACTTTACAAGGAATAACCATAATTGAAGTATAGAAGTTTGAGTTGCC TCTCCTTAACTCAAGCTTGATTCTTTATTGTGCATATGCATTTGCATATCTCCATTTCATATTTCTTTTTTCTCTAGATT TCCATTCACAGCTTATATTTCTCAAATTGAAAATGAAATTTGTGTTCTACATCTATTGTAACAGCTTGGACTTGCAGAGA AAAACATCTTGAGTTATGACTTTGATATGGTAGCATCAGACCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCT GATGACACGGATGACAGGTCCAAAAGAAGCACCAATCCTGAGGCAGCCCAACAAGAACCAGAGGTGAATGTTAGAAGAAC ATTACTAAGTAATAAAGAATGAAAATAATTGGTTCAGCATGATAAGAAATTGATGAGCTTGTGTGCCATATGGAATCTCG AAATTAAATTGATTATCTGAAGAAATGGTGTTTTTTTATCAATTCTAAACTTCCTTTGCAAATCATTCTACATTTCGAAG TGTAAGCCTTGATATTGGCATGCTTTTTAGTTTCATGTTGTATTCCGAAAAAAAAGGAGATATCAATTCTATTGGTACCA TAGAGATTGCCTTGATATTGGCATGCTTTTTAGTTTCATGTTGTATTCCGAAAAAAAAGGAGATATCAATTCTATTGGTA CCATAGAGATTGCCTTGATATTGGCATGCTTTTTAGTTTCATGTTGTATTCCGAAAAAAAAGGAGATATCAATTCTATTG GTACCATAGAGATTGCACTATGAACCCGTCAAAATCTTAGGTACTGTTAAAAAATTATGATATATAAATGAAGCTCATGG TATTTATAAATGAAATCTTAACCTACATTTCGGATGCAAGTCATGAATAAATTCGCATCCAAAGTAAATTTTGAACTGTA TAGCATGGAAACCAAAAGCAAAACTATGCGGAAGTTAATAAATAAATCGCTATTTCAACAAAAAAATTGAAGATATAAAT AGTTCCAACTATGTTGTCATAAACCAATTATCTCATAAGTTTAAGTTGTTAGGTGAAAGTACATGAATGGTTTTTATATA TAACATACCCCCATTGCAAAAGCCCTTTGGGCTTGTTGAAGTGTTGAAACTAGACATTACATAGGCTCACCTACCTCATA CCTTCTGCTGAATTTAATCATTTTTTATTAGAGTGGTGCAATAAGGAGTTAAGCATCAAACTCAAGAACATTGGATCATA ATAACTCTGATACCAAATCATAAAGTAACTAACCTAAAAGTTTAAGTTGTTTGTTAAAAAGTACATAAATAGTTTTTATA TCTAGCATCTGTATAGAGCCATTGGATTATGTATGGACATGCAGAAATGTGTTGATGACCCTTGCACATCTAGTGTGCAG AAAGCCAGAAAGGGTGAGAACTTTTGCATTTGTAAATAGGCGTAGTAGATCTTGCATCACTTCAATGCTTTTTGGGCCAG CTACTGGCAGTTAAGAATTGAGATATTGTTTGACTGATTTGCTTCTAATAACTGAAGTTCATGACATGTTACATTATAAT TTATGTTGTCATATACCTTTCCAGGTTAGTATTTCTAAAGCTGCTGCTGTCATTGAGGAGCTTCCGGGTGCTCAGATATC AGAATGTCGGCCTAATGTACCCGGAATAAGTGATCGCAGAACAGGTGTGCTCATCCTTTTCTTTCAACTGCTAGTTTCCA AGATATGAAATTGTACAGTCTTTTGCATGTCGTCGATGTTGAAGTATATAATGTAACACCCAGCTCGCCATTTTCTGTGA TTGTGATTGACTTCTTGTTTGAATGCCATAACATGACACTAATTAACATTTAGCTTTTAGTTTTCCTATCTTCACCATTT TGCCAATTTTGTTCTGTATATCTTCTCTTGAATTTCAAGAAAATTAAATAAGTACATTTATTCATGCTTTGGTGTTATTT ATTGTTATGGGATATTTGAATTCCTGAAGTTGAATAAAATTTGACTGATGCAAGTACCCCTTGTCATTTTTATCTCCTTA TTTTCATAATTTTGTAGGAAATTTTTCATCTGGTCCTAAGAAGAGTGAACTAAGGATTGGAGAGTCATCAGCCTTTTTCA CTTATGTCAAAGCAACAACACTGAAGAGCAACGTTCAAGAGATTGCTCATGTTGACAACCATGCTACTACTCAAGTGAGG GTGGAAGATATGAATCAAGCATGTGCTCGACAGAGGGTTAATGACCTCAAAACACATGAAAATCAAGAAATGTTTGAAAG CCGTTCTCAAGAGGACTTACCCAGCAGTAATAGTTTCCCTGATTCTTTCTCTATTGAGAGATCTTGTACTCCACCTGCAT CAGTGGAAGTTTCACAGCAAAAGAATTTCAGGGAAGAATATTATCCTCAGGGATCGTTGTATCCAAGCAATGGAAGTCGT GGTTCTAAGCTTGAACCGTCCGGCATGCCTGCTCAACATGCTTATCCATATTATTATAATTCAGGAGTTGTTAATCATGT TATGTTGCCATCATCTGCGCAACTATATCAAAAAAATATGCAAGACATCCATAGCCATGCTAATTCATCTATGATTGCGC AGTACAATCACCTTGCCCAGTGTTCTCCTCATGCGAATGGGATGACATCCTTCCCATATTATCCAATGAACATTTGCTTA CAACCTGGTCAGGTATCTACACCTCATTCATGGCCATCATTAGGAAGTTCAGGTTCATGCGAAGTAAACTTGAGTAAGGC TGATAGGAGAGAAGCAGCATTGATGAAGTTTAAACAGAAGAGGAAAGACCGCTGCTTTGATAAGAAAATTCGGTATGTCA ACAGGAAGCGGCTTGCTGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCCGAAAGTTGAGCGGTGTTGATGTGTATCTT AATGGACAACCTGCTTCCGCTGACTATGATGAGGAGGAGGAAGAGGAGGAAGATAACCACGTAGCAAGAGATTCCTCTCT TGAGGATGCTTGA
CDS sequence (LotjaGi4g1v0251000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTGAAGCTGAGGAAATTCTTAATTTGAATAGCAGAGAGAACAATTGTGGGGGAGCTAATAGTAAGAGTGGTGA TGCTTTTATTGACAGAAGCAAAGTCAGGATTTTGTTGTGTGATGATGATCCCAAGAGCTCAGAGGAGGTTTTTACCCTTC TTGTCAAATGTTCTTATCAGGTTACTCCAGTAAGATCAGCAAGGCAAGTAATTGATGCTCTCAATGCGGAAGGGCAATAT ATAGATATCATACTAGCTGAAGTTGACCTTCCAATAAAGAAGGGCATGAAGTTGTTGAAGTACTTATCACGGGATAAAGA ATTGCGCCGAATTCCTGTTATAATGATGTCTGCAAAAGACGAGGTACCAATCGTTGTAAAGTGCTTGAGACTTGGAGCAG CAGACTATCTAGTAAAGCCGTTACGCACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTT GGACTTGCAGAGAAAAACATCTTGAGTTATGACTTTGATATGGTAGCATCAGACCCAAGTGATGCCAATACAAACAGTAC CACCTTGTTCTCTGATGACACGGATGACAGGTCCAAAAGAAGCACCAATCCTGAGGCAGCCCAACAAGAACCAGAGGTTA GTATTTCTAAAGCTGCTGCTGTCATTGAGGAGCTTCCGGGTGCTCAGATATCAGAATGTCGGCCTAATGTACCCGGAATA AGTGATCGCAGAACAGGAAATTTTTCATCTGGTCCTAAGAAGAGTGAACTAAGGATTGGAGAGTCATCAGCCTTTTTCAC TTATGTCAAAGCAACAACACTGAAGAGCAACGTTCAAGAGATTGCTCATGTTGACAACCATGCTACTACTCAAGTGAGGG TGGAAGATATGAATCAAGCATGTGCTCGACAGAGGGTTAATGACCTCAAAACACATGAAAATCAAGAAATGTTTGAAAGC CGTTCTCAAGAGGACTTACCCAGCAGTAATAGTTTCCCTGATTCTTTCTCTATTGAGAGATCTTGTACTCCACCTGCATC AGTGGAAGTTTCACAGCAAAAGAATTTCAGGGAAGAATATTATCCTCAGGGATCGTTGTATCCAAGCAATGGAAGTCGTG GTTCTAAGCTTGAACCGTCCGGCATGCCTGCTCAACATGCTTATCCATATTATTATAATTCAGGAGTTGTTAATCATGTT ATGTTGCCATCATCTGCGCAACTATATCAAAAAAATATGCAAGACATCCATAGCCATGCTAATTCATCTATGATTGCGCA GTACAATCACCTTGCCCAGTGTTCTCCTCATGCGAATGGGATGACATCCTTCCCATATTATCCAATGAACATTTGCTTAC AACCTGGTCAGGTATCTACACCTCATTCATGGCCATCATTAGGAAGTTCAGGTTCATGCGAAGTAAACTTGAGTAAGGCT GATAGGAGAGAAGCAGCATTGATGAAGTTTAAACAGAAGAGGAAAGACCGCTGCTTTGATAAGAAAATTCGGTATGTCAA CAGGAAGCGGCTTGCTGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCCGAAAGTTGAGCGGTGTTGATGTGTATCTTA ATGGACAACCTGCTTCCGCTGACTATGATGAGGAGGAGGAAGAGGAGGAAGATAACCACGTAGCAAGAGATTCCTCTCTT GAGGATGCTTGA
Protein sequence (LotjaGi4g1v0251000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESEAEEILNLNSRENNCGGANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY IDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML GLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKRSTNPEAAQQEPEVSISKAAAVIEELPGAQISECRPNVPGI SDRRTGNFSSGPKKSELRIGESSAFFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVNDLKTHENQEMFES RSQEDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYPSNGSRGSKLEPSGMPAQHAYPYYYNSGVVNHV MLPSSAQLYQKNMQDIHSHANSSMIAQYNHLAQCSPHANGMTSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKA DRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADYDEEEEEEEDNHVARDSSL EDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 554 | 534 | 1.1E-250 | – | |
| PANTHER | 21 | 554 | 534 | 1.1E-250 | – | |
| Gene3D | 29 | 166 | 138 | 1.0E-25 | – | |
| SUPERFAMILY | 31 | 160 | 130 | 4.55E-27 | ||
| SMART | 35 | 150 | 116 | 3.1E-21 | ||
| ProSiteProfiles | 36 | 154 | 119 | 34.909 | ||
| Pfam | 37 | 148 | 112 | 3.4E-18 | ||
| CDD | 38 | 147 | 110 | 2.02372E-21 | ||
| MobiDBLite | 180 | 214 | 35 | - | – | |
| MobiDBLite | 232 | 255 | 24 | - | – | |
| MobiDBLite | 315 | 379 | 65 | - | – | |
| MobiDBLite | 321 | 376 | 56 | - | – | |
| Pfam | 483 | 525 | 43 | 1.8E-15 | ||
| ProSiteProfiles | 483 | 525 | 43 | 15.428 | ||
| MobiDBLite | 534 | 563 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0251000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…