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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0254700 |
| Transcript ID | LotjaGi4g1v0254700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TAIR: AT1G02290.1 hypothetical protein; Swiss-Prot: sp|A1TR21|DNLJ_ACIAC DNA ligase; TrEMBL-Plants: tr|K7MKH9|K7MKH9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0254700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60869444..60878203) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAAGGTCGTTGAACACCTCAAAGCGAGGAAAACGTCCCAAAAAGACCAAGCTCGACCAATAAAATCCCAACAAAGAG CACCCAAGCTGCTAAAGAAAAAACAAGACAAAAGGTTGGCAAGGGAAAACAACAAAGGCAGCAAAAACCCAAAACAAATA ACCCATTACAACCAAGGCCTTATAACCCCAAAGAACCGGCCAACAACAAAGAAAGATCAACCAGCTAAGAGCCCCCGTAC AACCTCGGATAATTAGCAACGAGATGATCCGCATTACTATGAATGACTTCCTCGTTAGTGCCATCTTGAACGGGTATGTG AACTTTCCCTTCAACCCATATGTCCTTCCACCTCTCATCATTCGAGCTATCTCTCCTTTAGTTTTTTTTTTTTTTTAAAT CCTCTTTAGTTCTTAATTATTCTATTCTATTTTTTAAAATCATAGCAACTATTATACAATTGAATGGTAATTTATGCTAA AATTTTAAAATCATTTATCCAACTTTCAAAAAAAAAAAAATCAATTATCCAAACCAGCAGCTTATTGAGAAAAAGCTGCA AGTTGTGGGGGAGCTTCCTCCACCACCACCATGAAGTTAAGCCAGAGCCCAATTTCACAAGCAAACCCAATCATGCAACT TCCTTTCTCATCAAACATTCCAATTTCTTCACACTCATTCTCTCCTCCTCTCACTTCAATCTCAACCTCCCTTCAATTCC CACGCGCCGTCACTACTGCAAACCAAGCCACCATTACCAACGATGCAGAACTGCCAACCATGTCCGAAATTCTATCAGCA TCAAAATCACAGAACCTCCACCTTCAACTCCAAACCCTAGGACCCTTTTTCAGAATCACTGCCAGAAGCTCCGTCACGGA AGCAGAGCTCGGAAAAGCAGAGGGAATCGTAAGATTCTGGGTTGGAGGTAAAATTCTTCACCTGGATTCCATCAAGCTCC GCAGAGAAACACTCAACATGGAAAAATCGATTTTCGGGCTTGGATTGTACATTGGGGCTGTTGCGATTCGACATGGGTAT GATTGTGGCTGCAAAACTGCTCAGTTGCTTGCCATCAATGATTCTGATCTTTACCATTCTAAGGTTTGCTTCAAGTGTTA GAAGTGATTTTTCACTTTTGAAGTTAATTCTTGGTTGTTTAGATGCTTTATTTCATAGTTAGTTCTGGTTCCAAAATCAA TTGTTGGATGAAACTACAAATTTGCAGTGTACACAGTCAATTTTAGGATTTCACAACTGAATTATCCAAACATAAACCAC GTCATTCGAACTTATTTTTATGGTAATTAATTTTATCAAAATCAATTCTATATACAATCAGATAATACTAATCCAAATGC GTGTGTGGAAGGTCTTGTTTGAGTTTATCTTATGACATAAGCACTTATGTAAGTGTTTTATAAGGTTATCAGTGTTCATT TTCTTAAGCCGCTTATATTAGCTTATAAATAAACACTTATATCCACCTATAAGCTATTTTGAGCTTATTTTGTTAAGCTT CTTAAATGAGCTTATTGTCATAAGTGCTTAATTAAGTTGTTTATCCAAATCTACTTAGGAACTTTTTGATGTGCATTCAT AATCCTCAAGGAGTGTCTTGAACTTGAATGGAGTAAGACAGAGTTTGAGATATTTTTTGAATCTCGAGACTTTCCTTGCT TTGAATTGGACTACCATCTTAAAAAATTCTAGTTCATTATCTATTATGGTCATGGGACTAAAATAGTTGTATTTGATGTC TTTTTTATTTTGACAGTTGATTAGGTTCTACACCAGACTTGGATTTAAACCTGTGTACGAAGTGACTGGCTCATCGATTG GGGATCTTGCGCACCAGCTTGTGTGGGGAGGTGTTGGTACCCGCATGGATGCCAGTGTTGAGGAACTGATGATAAAATGG TGTAAAAGATTTAAAACAACACCCAACAAGTGATTTCATCAGTCAGTGACTCGTCTTTCTTTTTATATGTAGAGAGGTTA GATAAATCTTTAGCCTGTAAAATGTATTTATTTCAAAGGTTATATAGCATAGAAAGTTGAGAGTGTATGTATAAACATTA TTCTAGGAAAGAAAAAAAGGGTTTTCCTTTCCTAGAGATACCTCATGATTAACTGATTATATAATTGATTCATTATTGAT ATTTATTTTGAGAGTATGATTTGCTGCTTGAGGTATACAGGAAATACTGAAATAGCTTGCTTAGAGACTCATAATGATAA ATGAGAAGGACTATTATTGATGTATTTGCTTTCCTTTTTTAAATTGCTGTATATTTACAGGTTCTCTGGCAAAATAAAGG AAACTGCTCAAGATTCTGAAGGTTAGTATGCTTTCCTAGTTAAGGAATTGGTAAAACAGATAGCATTCCTTCAGAAACAA ATTTAATAATTTTCCTTGTGGAAAACAAATCTAGTTGTGGTTTTGGTTGAAAATTTGGTGCACAAGTTCTTCAATTCTCT TGCTAAGTTAGACGGGCCACAATAGAAAACCCCTGCACAAGAAAACCCACAATCTCAGTTAGGAAAAACAACTCAACCTT ATATCATTCTTATATATACTAAGGTCATTTATTTCAATCATTAAACAATATACAAAGTTCAGAGTGTATTTCTCACCAAT CTTTGCTCCTCCATGCTTGCGAGCCAATCTGGAAAATATGTTGAACCAATTTGGTCGGGCAAAATGTGTGTGTATCTGTG AATTCCAAGAGAAAATTATTCCTTAATCTGGCAGTAGCAAAATGTGTAGACTTGACATGACAAATTGTTATTCCTAATGA TTTTCAGTTGGAGTATTTAATAAGAACATGGTTTGAAATGAGATAAAATTAGGAATATTGCTTTGGTGTGCCGAACTTGA TCAACAGCACTAGGACAATAACATAGCAATGTTTTAAACCGAAGGATCAAACCTAAACCATCTTATTTGTGAACTCCACT TAGAGCTTGCTAGTAATTTCTATATTGAAAAAACTATAGGGAAGATGCACTTACTGGAGTTCTGGAAACTATGTCAACGC CATTCTTGGCACGATACAAGGCCTGAATGACGCTTAGCAATGCTGAACGAACATCTCCCTCTGGATACACACTAGTTAGG AAATTATGCATTTCCACCACAGCCTTAAAAGATTACAAGAAAACTAGAACGGTCATAAAATGCTTGAAGATCTGAATAAA CAATATAGTTGCACTAACTCAGTTTTTCTCAGGAGCATCCAATGCCAGAGTCAAATCAGGCATACCTGTTTTTTGGTTGA ATTTGAGATTTCCTTCATGACATCTCTGAACCAATCAAAGGAGCTTTGCTCTTTTGTAACCCAATAAAGATATGCTTTTG ATGGACCCTTTGTTAAGCTGCATTCTCTGAGATCACTCTATTTCAAATGCCCAAATATGTTGTTTGTTTCATGGAATAGA AGAAGAGCGATTGAATTTTAATAAAGGCGCTATGACAGTAAGTATAAATAGCAGAAGAAGAAGAAAGCTTACATGATCAC TTTGTGCTGTCTTCACACCTTGAGCTACATCTTTGAGGATGCTAATGAAAGGTGTGGCACCTATGCCAAGGCCAATTAGC ACCAGAATGTCATACTTTACATGGTCTTGAGAGGCAGAACCATAAGGGCCATCTATGTACAGTTTTGGACACCCTTGTAA TCCAGACAACACTGCCTGCGGATAATCGAACAATTTTTAGACCTGAGAATTTGAGAAGCATAGTTCTTCACTTGAAAAAT TCAATTGTTACTTTACCTCTTGGAATAGAGCATATATTTGGTAACTCCAGTCTCCAAGAGTTCTAATGTGCACACTGAGG TAGTCATCTTGTGGTCCTGATGTCAAGGAAAATGGATGCCTGAAAATTTATACATAAGAAACTCACATAGACTCTAAAAT TTCCATAACAAACTAGATTAGTGGTACAAGGTCTCTTGAATAAAAAAGATCAAGCGATGGAAGTAGAAGTACCATTGAAA AGATGAAATTTGGGGGCACTGAATGAATATATACATGCCACTCTGGTACTTAAAACCATCTGGTTTTTGCATCTTGAGGT GCAGAACTTTTCCTGGGTAGAGACTTACCTGCATGCAAAATACAAAAGGAGAATAAGAAAATATTTATCATCATCAAGAA CAATAATAGAAACTAGTAAATTTCAGATTTTGGACTGTACCATTAGAGTTTATCAAATGAAAAAGAAATTTTAAAAACAG TTTTTATGAAAAGTTGAATATAGTAAAGTTGATCAAATACCTTCAAAACATCAACTTCGTAGGATCCTGATCTAATTGCT CGGAAGAACCTCTCTCCAGCGTACAATAAAACTGGAAAAGCAATGTACATCCATGTCTGCACACAGAAAGATGGAGGGAA TGAAAATCTACATCAAAATTTGTTCTGTAATTTTTTTTAGTTAAAGAGCTTTAGGACTTAAACTATCTTAGGCATGTAAA ATAAACTAATAATGATGAGTAGATTAATCACCACACTAATGAGGAGTAGTTTAAATGATTTAGAATATGTCTTAGTTTAA TATTGCATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTTTAAATATTTTATCATTTTTGGGTTA CAAGAGGAAGATTATATTCATCATTGATCTTATTTAAAAAGAGAGGCACAAATTGAGTTCTACATGAATGGGTATCACGA GTTTCAAAGGGGTTTCCTATAAAAGACTAAAAGCATGTTTGGATCATTTTCTTTTTTCCTTAGAATCAATTATAACACCT AGAAGCTACTCACATAAGCTTCTTCCTAGAATTGATTTTAACTTTAGAGCCAATGGTAGAAGGGTTTCCAAACATGCACT AAGCTTGAATGAATTATTCAATTTTTAACCATTAGATGCATTTTGTTTAGAGGAGGGGAAAAAACTTTTCACTATATAAA CTTTGAGATTAGAGCTAACAATAGTGTAACTTTCAAAAAAAAAAAAAACAATAGTGTAAACATAAAGTGCTAAAATTACG CCAAAAATATCACAAAGAAAGTGATATAACAAGGATGAAAGATAGACATTAAGAGGCTTACCGTTTTCTCCGCCCACTTG TTTGTTAGAAACAAGAACATGGAGTGAATAATGAGCAATATGTACACAAGGACAAACAAGTGGTGGGAGTACCAAAAGGT GTCATATCCAGTGACCTTTCGGAGGGACAAGGGTAGCACCGGTGAGCCACGCCTAGGCCACTTTGTTGCTAGTGAAAATG CAATGGCCATTAACACCACCATGGCAATCCCACTTGCCACCTCCGTCGTGGCTAAAATTTCTATGTACGATGGTTGGTGA TACCCGAATCCAGCGGCGATAGTTTGCCGGAAAATTGATCTGTCTGAGTCACTGATTCTTGGGAAGTCACAGGCAAGGTG CGTCCCACCGTGCAAGATCACACCCACCACTATTCCTCCCGCAATAACCTGCATATATAGCCCATTTGAATAACTTTATC AAAAAAAAATTATTTCTACAGGTTGATGTTGTGAAATCTTAACTATGAAACATCACAATTGATTATGATCGACCACAGAG GCTAGATCATGTGCCTTTAAGTGAGGTTAAGAACTTAATTTAGATGAATGCAAGCCATATAGTGTTACATCATATAATGG ATTTCCCATCTTAGGAGTGAATATTGTGTGACTTAAAGATGTTTAAGCTATTGACATGAAATGCTGGATCAATAAGAGGG CCTACCTTATGGAAATTAATGTTGTCATTAAATGGAATGACATAGTTAACACGACGGTTCTTGCGGAGCCAAGTGATGGT ATTTCTACAAACAGGGAGAAGAACAAGGGCCATGTTGAGTTTCAAGGTCTCAGCTGCACCTTTTGCAGTTGGAAGACAGT ACCCCATGACTTCAAACCCTGATCTAAGGCGATACTGAGCAAATTTCCATGAAAACAACCCAATGCATGCAAGCAGCCAC ACAAGAACAATCCAAGTACGCCGCCAGTAGGTTCTGAACAACACTTCAGCCCTTGACATTGGTTCTTGTTCTTCACACGA GCCACTGTTGTGAAAATTCTCTGTGCTGTCCCTTGCTGATACTTGTTTCATTGGAGAAGTTGTGACTGTCTTTGATAAGT TTGCCTTGAATAGAGACTCCATCTGAGATATCTACATACAATGAATTTCTTACTGTTAATAGTATGTTTGAACCGGCTTC TCTTTCCTCATAACCAATTCCGGAACCCAAAAGCTACTCAAAAAGAAGCTTTTTCCCAAAATTGATTTTGGCTCCATAAT GCACTAAATAATATATATATACATATGGTTGAGGGTCATCTGGTGAATCCTCAATTTGCAAGGTTGAGGCTAATTTGTAC CTCAATGTAGCCTTTGTTTTTGGTGTCAATAGATTCCATGATCAGAGCTGCATAGTCCTCTGCTTCATCACGTGTCACCG ATAGCTTATTTATAGAAGCTGTTAGTAAAATTGTCTGCATAAGGACCAAAGTGATCATCAAATCAAGGTACATGAACATG CAGAAAAACTAATCACATATAATGATGATTTGTGCACACCCACTTGAATTAATTATAGAAGTATATTATAGTTTGTCTGC GGAAGAGCCAAAACTAACACGAACATGCACAACATGACAATTAACACATGAAATTTTGAGCAGCCTCAAAGCTAGTAATA TTATTATTAACTATAAGAAAATAAGTAGCCAATCATTAAATAAGTGTTACCTGCTTTATGTCAGTCTCTGTAATTCTACC ATCCATGTTTCTGTTGCACCTAAAGTAAAAAAAGCATAACAAAAATTACAAACTGATTTCAGAGTTGTGAAGAAAAGAGT TTAGTAGAGGAATTTTTATTTATTTTTACATGTCAAAGAAGATTCTCATTCTTGAGTTAAAAGAGTCATCTTTCATCCTA GACCAAAAATTGTGCAAATCAGTCTTGGTGATATCAGATTTCCAATATTTGCCTCCTCTTAGTGCTCTTAGCAATTCGGT GGCTATCCCTGGTGATGATTGCATCCCTTTTGGAAAATGACAAACTCCAAAAGTGAATAATTAAAATAATGGTTGGCAAA GTAACATCAAAACAGGTCGGCATACATAGACAAAACTTTCTAAAAAACAATAAAAGGATCAAGGAGACTTAAACTTGAGG AAATGTTAAACATTGCATATTGAAATAAATTGAGTAGGTAAAGGGTTAATAAAAATTAAAGATGATATAACTTGTCTTTG TATTCTTGCACTATAGTGTATGCGGAGAACATGGCCAACTGCTATAAGTGACACAAGATAAACAGAACAGGCCCCGAAAA GGACTGGTCAATCATGCATTGTGAATTATTATGAAATGATTTATGATTATGAAGCAAAGTGATAATGTTATAGTACTAAA AATGTTTGACTTTTTCTATATTCTCACCAATGCAGAACCCAAATTCAGACCAAGCTACAACCGGTTCAGGGCCGCCCCCG GTCCAGGCCACTCGGTCGAACCGCTTCTCCACTTCCTTCCACTCCATTCTACCCTGACCGACAATGTCATTGAGGAATCC TATGCTTTGAATAGCTTCATTTTCTGCCACCTCATGCAGTGGTGAGTCATCAAAGCCGGTTCGAACTGGAGACAAGGACT GAAGAACATACTCAGCAGTCCATGAAGAAGAAGAGGAGGAAGAGAAGGAGCATGAGGAGGATGAAGAAGAGGGTGATGAT TTAAAGAGAGAAATGAGAGAATGGTCATGAAAAGTTTGAGCCTTTTCAAACCCATCCATTGATGGATTCTGAAAAAAATG AAGCTTCTTTATGATAATCAAGGTTTCATGGAAGGTGGAGATTCTATTATATCATGTTCTCAAGAAAATGTAGAGTGTGT GTGGTGATGGAAATATAAATTTGCTTCCAAGGAAAGAATGTCAATGGATTTTAAGTATTTGACATTTGAAGCAGAGAAGA TGAGAGTTCTTAGCTGGAGTTGCTGGAATGAATGGAATTGTTTAAATTTTTCCTAGTGGGTTCAAGAAGTGGCCATTTTC TTGTCATTTTTTTCTCTTCTTTCTTTTCATGTAGAATTTTTCTTTGGGATTGAGTGGTTGAGCAAGGGAGATGATAAAGG ACAAGTTTGATAGATTAATCAAAAGAATAATAGATTATGAGCATGGTTTGGTGAGAAAAATATTATATAGAATTAAAGAA GTTATAATAAATGGAGGTTTTGTTGGAAAATTGGTGAGATTGTGAGAGGATATGGAGAAGAGAATTAAGTAAGAGCAGGT TGGAAACAAATCCACGGAAATGAAAAGGGTGTGATGTGTAAGTGCTTTCTTGTGTGTTGGTTGAAATTAATGGAGCATAA AAATAGGACAGAGATATCATTTCATTTTCATTTTCTTACCTGCTATATGAAGAACAGCTCATGGCGTTGCAACGCAAGAA AGAGAGAAGAGGAGAATGGTAACAAGTGCTAGTATTTGTTCAGGTTTCGGTGCAATTTGGAAGTATCCTTATAGGAGTTA ATGATAGTGTTTTGGGTAAGAAAGAAACAGTCATATTGATGTGTCACTGTACTCAGGCTTTTTGTAAGAATAATAATAAT GATCGATCACCATGAGGAGGAAAATGGATCATTGACAATACAGTCGACATACTAATAGAGGAAAAGAAGTTATGAATACA ATGTGTAATATGATACTGATATAATCCTTTAAGAAAAAAT
CDS sequence (LotjaGi4g1v0254700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTAAGCCAGAGCCCAATTTCACAAGCAAACCCAATCATGCAACTTCCTTTCTCATCAAACATTCCAATTTCTTC ACACTCATTCTCTCCTCCTCTCACTTCAATCTCAACCTCCCTTCAATTCCCACGCGCCGTCACTACTGCAAACCAAGCCA CCATTACCAACGATGCAGAACTGCCAACCATGTCCGAAATTCTATCAGCATCAAAATCACAGAACCTCCACCTTCAACTC CAAACCCTAGGACCCTTTTTCAGAATCACTGCCAGAAGCTCCGTCACGGAAGCAGAGCTCGGAAAAGCAGAGGGAATCGT AAGATTCTGGGTTGGAGGTAAAATTCTTCACCTGGATTCCATCAAGCTCCGCAGAGAAACACTCAACATGGAAAAATCGA TTTTCGGGCTTGGATTGTACATTGGGGCTGTTGCGATTCGACATGGGTATGATTGTGGCTGCAAAACTGCTCAGTTGCTT GCCATCAATGATTCTGATCTTTACCATTCTAAGTTGATTAGGTTCTACACCAGACTTGGATTTAAACCTGTGTACGAAGT GACTGGCTCATCGATTGGGGATCTTGCGCACCAGCTTGTGTGGGGAGGTGTTGGTACCCGCATGGATGCCAGTGTTGAGG AACTGATGATAAAATGGTGTAAAAGATTTAAAACAACACCCAACAAGTGA
Protein sequence (LotjaGi4g1v0254700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSQSPISQANPIMQLPFSSNIPISSHSFSPPLTSISTSLQFPRAVTTANQATITNDAELPTMSEILSASKSQNLHLQL QTLGPFFRITARSSVTEAELGKAEGIVRFWVGGKILHLDSIKLRRETLNMEKSIFGLGLYIGAVAIRHGYDCGCKTAQLL AINDSDLYHSKLIRFYTRLGFKPVYEVTGSSIGDLAHQLVWGGVGTRMDASVEELMIKWCKRFKTTPNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 41 | 226 | 186 | 9.0E-98 | – | |
| SUPERFAMILY | 60 | 189 | 130 | 3.75E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0254700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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