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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0264500 |
| Transcript ID | LotjaGi4g1v0264500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SQI3|FATB_GOSHI Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A151SLK9|A0A151SLK9_CAJCA Acyl-[acyl]-carrier-protein] hydrolase; Found in the gene: LotjaGi4g1v0264500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:62882609..62888384) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAATACTACCATTGCCTTTGCCTTATCTATCCCTCTCTTCTCTCTCTCTCTCTCCCTCTCTACATAAAACAAACCCA ACTCACATTACAACACACGTTCATTTCATAGACATAAATACCCTTTATTTTTTAAATGCAAAAATCAACAAAAAGAAGAA GAAACTGGTCTGAAATGACGCAATAGCCCCTTCCTTTGTTCTCCTGTGATTGTGAATTCATTCACCTTTTCTTCTCGTTT GTTGAGCGCTTCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCCTCTGCTTCATCTCCTTCTTCATCTTCATCACCACCT CGGGTACGCAAACAAATCTTCTCTGATCTACAAACTGCACTTCCACCCTCCCCTTAATCATTCGTTTTTCAATGTTTTTT CACTTTTTTTTTTGTTTTTTTTCCACAATCGAAGCGAATATTAAACAACCAAAATCCATTGTTTTCTGCATTTTTCGCCA TTGTAGCGAAGGTTCTCGTTGTTTTTTGTTTTTCGTTTTTTTTTTGGATTTATTGGTTGCTGGATGCAAAAACCGCGTTC GGTTTGAATTTTCGACGCAAATGGTGTTGTGATTTTCGTTGTAAATTGCAATGTCTATTATTTTTCTTCGTTTGGAAAAC AGAACCAAAATCAGTTTTGTGTTTTTTTTTTGTGGCTTGCGATGTTTTCTAGACTAGATTCATAGCCAGATCTGCACGCG GTTTTTTTGACAGCTGTTGTTTGTTCCTGTCTTTTTTGGTCTGTTGATTGGTTTTATTTCCTATGATTTCCTATGATTCT GTGTTCCTGAACTTCTTTGTGGAATCTCTCACAAAGGGTAAAGTAAACTTGCCATTTTGAGTTATAGGGTGGAATCAATG AACTCTGAAAAGATTGATAGAATTGTAGGAATTCAAAACAAAGCTTGCTTTTCACCTCTTTGTTATTGTTTGTCATTTGG GTGTGGAATGATGTGTTTCCTGTTGATTGATGCATTTTCCATAAGATTTTCCATTTTTTATGGAAGGTGGGAGAGAAAAT ATGTATATTTATTTTTAACTTGCTTCATTTTTTGCATACAGCTGCTATAGGAACTCATCATGGTGGCCACTGCTGCTACT TCTTCATTTTTCCCGGTGACTTCGTCCTCGCAAGACTCGGGTGCAGCTGGCGCCAAGCTTGGAGGTGGGCATGTGAGCCT TGGAGGACATAAATCCAAGCATGGTTCTTCTGGTGGCTTGCAAGTGAAGACAAATGCCCAGGCCCCTTCGAAGATTAATG GTACCACAGTGGCTACTCATTCAGAAAGCTTGAAGCATGACGGTGATTTGCCTATGCATGCTCCCAGGACTTTTATCAAT CAGTTACCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCTTGGCGGCGGAAAAGCAGTGGATGATGCTTGA TTGGAAGCCGAGGCGACCTGACATGCTTGTTGACTCCTTTGGTATAGGAAGAATTGTTCAGGATGGTCTTGTGTTCCGTG AAAACTTCTCTATTAGATCATATGAAATTGGTGCCGATCGAACAGCGTCTATAGAAACAGTAATGAACCATTTGCAGGTA TGTTGGGATATAAACATAAGTTGTGAGGCTTGTACATGTACTCTGCAGAATTGAAATTCTTATCAGACAATGGAAGTTCC TTAATGCTTCTCATACATGATTATCTAATTTATTTGTTTGACAACAGGAAACGGCACTTAATCATGTTAAGACTGCTGGG CTTCTTGGTGATGGCTTTGGTTCTACTCCAGAAATGTGTAAAAAGAATTTGATTTGGGTAGTTACTCGGATGCAGGTAGT GGTCGATCGTTATCCTACTTGGTAAGTTACCCTGAATCATCCGTAATTCGTGTGATTTGCACCTGTATCCATATTAAGTT TCTATTTCTCTCTTTATTATAGTGATCTTAGTAAGGAATCATGACCCTAAATATCTCAGTGTCTATTGATACTTATATAT TTATTCTGTAGTTTCTGTATCTTGTTCCTCGGAATCGACTTCTAAGTTGAGACTTTGTCATGAAAACTGCAGTACTTGTG AAATTCTTGTGGGATGATAATTGGTCTGATAAGCATAAGTGTTACATAAGTGTTATAACTTATACATGATGAACTATGAG AAACCTTATGCCATGGATCTTTAATCTGTATATCAGATATAATATGTTATTCAGTAGTAATTACATAATAAATTTGGTGA CATGACCTTGTTTTAACTACAGTAGAAAAAAGCAGCGGCTAATATTTGATAACATTTGGCACTTGGGCAGAGTGGAACAG AACAACCTGCGATTTTTTGTTCTTAGTGGTTCCACTAGAATGGGGGGAACCATAATTGTCACTTTTTTCTCTTATGTTTT ATTCCGTTTTACTTTTATCTGCATCAAAATAAAGATAATTCACATGCTTTGTTTTGTAATTTTTTGACGTGTCTACCAAA CGCTACCTATGTATGTGTTTTGCATTTGTTTTGTTTGAGAACTAGATGTTTAAAGCTTTCAATTACTATGGCTTCTTGGT CCAAATTGAAGTTAAATAAACTATTACTGTGGATTATTATCAATATTTTGAATTTGATCATCTTAATTTCAACGTCTATA TTTGTTTCAGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGGATCTGGGAAGAATGGTATGCGTCGTGATTGGCTT TTACGTGACTGCAAAACTGGTGAAATATTGACGAGAGCCTCCAGGTAGAAATATTACTTTGGAATTCTCCTCCCCCTTGT GCTGCCAACAACAAAAAGTACTTTAAAATGTTTTCTAAATGCGCACCACTTGCTATTGGGTTCACTTTTTGAATATTTCA TACATCTATGGAGCTATGAAAAGTTTTTTTCTCTTTATAGTCAAATGTATTTTAACTGAAATTCGAAATATCAATTTTGC ATTTGACTATGTTTAAGGCAACAAACTTCATATTTAAGTATGTCGTACGTTTTCAGGTATAAACCTCTAATTGTACCAAC AAAACTGTGTTATTTATGTTTATTATTAAGTAGAAGACTTTATCCTGTACTCGTGCATAATCTTGGAGCTAGTAATTAGT AACATGTATACACTTTCTGATCTGTTGGCTATGGTTTTGGTGATCTACAGTGTTTGGGTCATGATGAATAAACTGACCAG GAGGCTGTCTAAGATTCCAGAGGAAGTGAGAGAGGAGATAGGATCTTATTTTGTGGATTCTGCTCCAATTCTGGAAGAGG ATAACAGAAAACTGCCTAAACTCGACGACAATACTGCAGATTATATTCGTTCTGGTTTAAGTGTATGTCCACTCTTTTCA GTTATTGTTATCATCTTTTTATTTATTCCATTTTCCTCATATGCTGGTTTCTGATTAGGTTGCATATTGTCTCTGTTTTT TCAGCCTAGATGGAGCGATCTAGATGTCAATCAGCATGTTAACAATGTGAAGTACATTGGCTGGATTCTGGAGGTAAATT TTTTTTTTATTGAACTCTAATCCTTATTTCTTTTTCCTCTCTTTCTTTGTTCATTTGGCCCATCACTTGTGGTGCAAGAT TGGAATCTTGCCAATCATAAATGTGGAAGGTCAGACCAAACTCCTGGTGGATTTATTAGTGGTAATCATTATATAACTAA AGCACCCAACTTCCTCAAAAAAAAAAACCCTACCCTTTAGTAGTTTACCGTATAAACTTTATGCAGAGTTAGGGTGTGGG CTCTTTTGAAGAAAATTACTTTGAGTATTGTTACTTTTGAATTTTATGAAAATGATTGATATGGTAGTCGAATTCTAAGA TGAAATATTCATTAAGCTGTGGTGTTTATTGGTATTTGATGCCTCCTCTAGTAGGTAGTAATTTTTGAGCTAGTGAGTAA TAGCTTTAAAATTGAAATGTGATATAGTCGAGTAGAACTGACAAGCAGTGCTTAGGAGAGAACTCATAAAATTGAACAAG AGTAAGAGTGCGATGTTTGATCTTTTGTGAAGAGTTTTGATACGTTTACACTCTCATTCTCTTACATCTCTTTTCCACTC ATCCTCTTCCATTCTCACTATTCTTTTCCTATGACATCACCTACAATGTCTCACATTTTCTCTTCGACTCCTATATCTCA TAAGGTGGAGGTATAATTAAAGTGTGCATGTATTACTTTACTTTTGTAAATCACTTATATATATATATCCCCCTTTTTTA ATTAGAACTTGTTAATTTGTTTTTGGAGATGCAAAACTTGATATGTTTAATTGTTTAGTTTGTTATGCATTGGGTTCATC AGATCAGACCTCTTAACAAAAAGATTATGCTTTGACTGTTGCAGAGTGCTCCACAGGCAATCCTGGAGAGTCATGAGCTT TCTTCCTTGACTTTAGAATATAGGAGGGAGTGCGGCAGGGACAGCGTGTTGCAGTCTCTCACTGCCGTATCTGGGGCTGA TGTGGACAATCTAGCCCACAGCGGACAAGTTGAGTGCAAGCATTTGCTTCGACTTGAAGAAGGCGCTGAAATTGTGAGGG GCAGAACTGAGTGGAGGCCAAAACCTGCGAACAACTTTGATACCGTGAATCAGGTTCCGGCAGTCAGCACCTAAGTCGGA TTGAAGGTTGGAATCGCATCAGTCTCCATGCCACCATGTTCAAACTGGTTCTGACCTCTGGAGAGTTTTGCTTGCGCTAC ATGTCCTGGTGGGGGAGGGAGGGAAGGTAGCATTGATGATGATCATGCTCATTGTAAATTAGCTCCTGCTCTACTCTGTT TCTCTCTGCTCCGTATTTTGATTTCATTTCTGGTTGCTCTGATGCTAGGCTGTTCGTCTTCAATATTTAATTGCTTGATT AAAATGGGTAGGCATGTATATTATTTTATTCTTTTTCTAAAGATGCAATTTTCCTTGTGAACACAACAAGCACGCCTTTA GGCAAGAATGAGTTGTTCGTATAAATACAACTGTGATTGTTTGCTCCATCTTGTAATGTTTGCCAGCTTAGTCCCACATG GGAATTATTGGATGCACAAACTCCCTTCTCCTTCAAGCATGTTATAATAATGATGCATGTTATTGTTAGGTTTATGGGGG AGATTAGGATATGTGGGGGCCTTGTCCATGTGCTATCCTATGTCTATCCACATTTTGCTTGGACATTATGATTGGGCTGG CAAGTCGTGCCTTTTAGGACTTCACTGGTTTAAGGTTTGAATTTTTATTTTGTACCTGCAGAATGTGCAAAGTTTCTCTT TTTTTGTTGGGTGTCAAGTGTCAACTATTTGAGTATTCGGGATTTGATATTTGGCCACAATTAAGACTTTTGGACGTCAC TTGTACCAAGTGTATTGTGTGAGAGTTGAACCTGAGATATCTTCCTGCACACTTGTGTTTCAATAAAGCTATCCCTCCTC ATTAATTTCGCTCAGTTTTACCCAAAATTAAAAGAGTGGATTTTTTTAGAATTCATTATTTTTCGGGCGTCTGATCTTGA GATAATTGAGAATGAATTTCTACTCCAAGTATAGATAGCTCAAGCCTTTTGAGGGCTGTTCATTTATATATCATGTCTCC GATTTATTTTCTAAAGTTAATATATTTCATTCTGATATATTTTGTCACACTGTTAGAACATTTATACATAATAATATTTC TTGCTGCGTGTCATACAATATTTGCCATTTCAGCTTTTCGGTCATTGTATGATTAAAGAAAGTCCTTTAAATAAACAATA CGCCACAACTCTTAGA
CDS sequence (LotjaGi4g1v0264500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGCCACTGCTGCTACTTCTTCATTTTTCCCGGTGACTTCGTCCTCGCAAGACTCGGGTGCAGCTGGCGCCAAGCT TGGAGGTGGGCATGTGAGCCTTGGAGGACATAAATCCAAGCATGGTTCTTCTGGTGGCTTGCAAGTGAAGACAAATGCCC AGGCCCCTTCGAAGATTAATGGTACCACAGTGGCTACTCATTCAGAAAGCTTGAAGCATGACGGTGATTTGCCTATGCAT GCTCCCAGGACTTTTATCAATCAGTTACCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCTTGGCGGCGGA AAAGCAGTGGATGATGCTTGATTGGAAGCCGAGGCGACCTGACATGCTTGTTGACTCCTTTGGTATAGGAAGAATTGTTC AGGATGGTCTTGTGTTCCGTGAAAACTTCTCTATTAGATCATATGAAATTGGTGCCGATCGAACAGCGTCTATAGAAACA GTAATGAACCATTTGCAGGAAACGGCACTTAATCATGTTAAGACTGCTGGGCTTCTTGGTGATGGCTTTGGTTCTACTCC AGAAATGTGTAAAAAGAATTTGATTTGGGTAGTTACTCGGATGCAGGTAGTGGTCGATCGTTATCCTACTTGGGGTGATG TTGTTCAAGTAGACACTTGGGTTTCTGGATCTGGGAAGAATGGTATGCGTCGTGATTGGCTTTTACGTGACTGCAAAACT GGTGAAATATTGACGAGAGCCTCCAGTGTTTGGGTCATGATGAATAAACTGACCAGGAGGCTGTCTAAGATTCCAGAGGA AGTGAGAGAGGAGATAGGATCTTATTTTGTGGATTCTGCTCCAATTCTGGAAGAGGATAACAGAAAACTGCCTAAACTCG ACGACAATACTGCAGATTATATTCGTTCTGGTTTAAGTCCTAGATGGAGCGATCTAGATGTCAATCAGCATGTTAACAAT GTGAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGGCAATCCTGGAGAGTCATGAGCTTTCTTCCTTGACTTTAGA ATATAGGAGGGAGTGCGGCAGGGACAGCGTGTTGCAGTCTCTCACTGCCGTATCTGGGGCTGATGTGGACAATCTAGCCC ACAGCGGACAAGTTGAGTGCAAGCATTTGCTTCGACTTGAAGAAGGCGCTGAAATTGTGAGGGGCAGAACTGAGTGGAGG CCAAAACCTGCGAACAACTTTGATACCGTGAATCAGGTTCCGGCAGTCAGCACCTAA
Protein sequence (LotjaGi4g1v0264500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVATAATSSFFPVTSSSQDSGAAGAKLGGGHVSLGGHKSKHGSSGGLQVKTNAQAPSKINGTTVATHSESLKHDGDLPMH APRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLVDSFGIGRIVQDGLVFRENFSIRSYEIGADRTASIET VMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSGSGKNGMRRDWLLRDCKT GEILTRASSVWVMMNKLTRRLSKIPEEVREEIGSYFVDSAPILEEDNRKLPKLDDNTADYIRSGLSPRWSDLDVNQHVNN VKYIGWILESAPQAILESHELSSLTLEYRRECGRDSVLQSLTAVSGADVDNLAHSGQVECKHLLRLEEGAEIVRGRTEWR PKPANNFDTVNQVPAVST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Pfam | 1 | 125 | 125 | 1.6E-54 | ||
| MobiDBLite | 1 | 49 | 49 | - | – | |
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 1 | 411 | 411 | 2.4E-217 | – | |
| PANTHER | 1 | 411 | 411 | 2.4E-217 | – | |
| Gene3D | 129 | 406 | 278 | 7.9E-96 | – | |
| SUPERFAMILY | 133 | 285 | 153 | 5.09E-44 | ||
| Pfam | 136 | 400 | 265 | 5.2E-84 | ||
| CDD | 139 | 255 | 117 | 2.87899E-17 | – | |
| SUPERFAMILY | 300 | 399 | 100 | 6.79E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes. | ||
| Molecular function | Thiolester hydrolase activity | Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A. |
Expression pattern of LotjaGi4g1v0264500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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