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LotjaGi4g1v0268800.1

Overview

Field Value
Gene ID LotjaGi4g1v0268800
Transcript ID LotjaGi4g1v0268800.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Aspartate racemase; TAIR: AT1G15410.1 aspartate-glutamate racemase family; Swiss-Prot: sp|O58403|RACD_PYRHO Aspartate racemase; TrEMBL-Plants: tr|A0A0L9TSD3|A0A0L9TSD3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0268800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:63421401..63430414) extracted from Lotus japonicus Gifu genome v1.2.

CGGCCGGTTGGGTCAACGCCGGAGCTCCGGGATGCCCATGTGGCATGGCCACGTCATTTAATGAGTCCATTTGGAATTTT TTTCTTTTTCATTAAAAAAAAACCTTAAATCCCTCCTAATTAAATTCTTCCCTTCCCTGTGCAGATCCTCCTCCACCTTC AATCTCTGCACCGTAAAGAACAAATTCATCTCTTCTTATTCACTTCAATCATACCACCATTCCCAAATTAACTCACCAAC TAATACCAAAATTAAATCACCAACGAACAATTAATCCCAATCTGATTGTAAATTACAAATTATATACTGAAGATGTGCTG AAGCTGCTGAAACGGTGGATGATTCATCCTCTGCGGTGGTCACCACTCACAACCACGGGCACAACCTTCTCCTCCTTGTG GTAACTGTCTGTTTTTCTCTTATCAAGTTATCATCTTATGAAAAAAACTGGAGAAATTCATCTTCCTCCAGCAAACATTC ATCTACACTCAAGAACCCAGATTTCAAGAAGATAATCCCAAAAATTCTTAAAACCTCTCCTTTTCCTCCTTCCTTTTCGT CCTCCTTTCTCTCTTTCTCGTGTGCCCAAAACCTCCATCTCCAAACCCAAAACCTTCATCTCCCAACTTCTCCGGAGAGA AAACCCATAGAGAAAAATTCCAACTCCAATGCTTTCTTCTTCCTGAAATAAAACTCAAAGATCAATAAAACCCATTTGTG TTTTACTCCGATTTAGGTTTTTCTCATCTTCTACGTCCACGCTTCGAGCTTTCTGCTTCTTTTGGTTTTTTTCTTTCTTT CTCAGAGATGCCTCGATCTGGGAGGGGCTTAGGTTGGGGTGGCTCGATCTGGGTGGGTTGGGGTTGGGGGTGACTCGATG TGGGAGGGGTGGGGTTGGGGGTGGTGGCTTGGTGTCGGGGCAGCTCGATCTGGGTGAGACTGGGGTTGGGATCATCTTCA TCTCCATGTTCATCTATTTGTTATTTTATGGGTTTGGGATTTTGTTTTCTAGGATTTCTGCTGCACTTAGGTGAGTGTTT TAATTAATTTAAAGGAGGTTAATTAGGGAGGGTTTAGTATTTTAATTATGGGTTTTTCTTAATAAAAAAGAAAAAAAAAT CCAAATGGACTCATTAAATGACGTGGCCATGCCACATGGGCATCCCAAAGCTCCGGCGTTGACCCAACCGGCCGGAAGGA CCAAAACCAATCATTTTGCCAAAAACTGGGGATTAATCCCCACCTTTACTCCGGCGAGGGACTAAAGCCATATTTATGAC AAAGGTTAGGGACCAAAAACTTGATTAAGCCTCCGTTAAATATGTAGACATATGATTTCGAGCAGATATTCGATTGACAT ACGGTTTAGCGGCGATTTTAACTGTCGGCCGCTAAACTTTATCTCACTCTATATCATATGTGGAGTAACATTAGCTTATA GAAAAATGTATTCATTCTACATAGTACTAGATATTTAATGGTGAAGACCGCAAGCAAATAATTAGTGATGGGGAGTGGGG ACAACCACTCAGCACAAGACACATTTCCTGTGACAACCATTGAGCATAAGACAAATAATTCTTCCCTTTCTTTAACTTGA AAATTTCAGAAAATATTCCATTGGCTAGTGTGTATGAAGCAAAGCAATCAGACTATCAGAGGAAAGAGTTGATTGGTGCA TGAACATGACGTCCTCAGATTTCATCAAAAGCACACGTATCAAATCTTCATTCATTCCTGTGTAGTCCTTGCAGAAAGAA ACGAAATGGTATCTAATAATTCAGTAAGACAAACAAACCGCAGAGACATGATATCACATGTATGGCGGCTGAAGATCATA AAATAACAGTTTGCAGTAGTTTTAATGGACGGACCATCACTAACGTTGGTATGTTACAATAATGAAACCTTGGCCCTTAG TGAAAATTAATAATAGATATAATGCAAGTGGACAATTATACAACCACTAAAAGACAGACCACAAATATCTTAAGGTTAAT TGTTGTTACCTACCTATATTTGGATGTAGTGGTAAATCACGGTGAAACCAAAATCACGGTAGACAGCCCCAAAAGCTAAG GGAAGTTACTCCTGTCTACTTGTCTACTGTGATTTTGGCTCACCGTGTATCCATACATGCACTAAGATCCTTGGAGGTTA TTTGAATTTGAACTATAGCCCCTTTAGTCATCGAACATGTCTTGTGTACCTGCGGTTCTGGCTTTAGAATCTGTGCTAAG ATTGGCTAGAATCCGAAAGCTGAAACCCATGAAAGCTCAGCAACACTCCTGGATTTTAGTGCTGTGTTGACTGTGACAAA ATTATCTTTCAAGGGCACTTGTCAAGTTTTCACTGGTAAAGATGGTAAAACTGATGGAAAGAACATCTATACATAGATGT ATAAAGTTCTGACACATTCAGAGAAAAGCATCTTGTAGATTGTTAGAGATGATAGAAGGGGGCATAGTGATGTCCATACA GACACCAAATCACCCTCTATTTCTTACTGGTGATGCCTTTAAAAAGAGAATTCAGACTCAAAGCAGAACAAGATCAAGTT CAGGTACAGTTTTGCAGGTTTCTTCAGCTCTGCTTACAGATGAGAATGGAAGCTATCCAGAACCAGGTACTTCCTTCATG AGATGTAAGAGACCTTCTTGCCTTCTAAGCCAACCAAACACTGTTGGTGTTATAGGTGGTGTATCAGTACTATCAACTCT TATTTTCTTGGAAAAGCTTGCTTATTGGGGTTCAAGAAATGGTAAGGAATGTCCGCCTTTTGTGGTCTGCAGTGATCCTA TGTTAAGCAAAGTGCTTTCATCACGCGGTCCCTTTCCTTCTGCAAGGAGCAGAATGGCTCATATCAAACTGAAGCAGGAC CAGGTAATTGAGAATTTGAAGTACACAATGAACTTTCTTCAGCAGTCCGGTGCGCGTGGCTTGGCCATGCCCTGCCATCT ATCACACGCGTGGCACGGCGAAATTTCGGAGGATGGTTCCCTTCCATTTCTTCATGTTGGTGACTGTGTGGCCATGGAAC TCAAGAAAGCTAAGCTGAAGCCAATTCATGCTACAAATACTGTGCGGATTGGACTGCTTACTACAGATTCCCTTTTTGTA GGTAGTTATTACCAGGATAAGCTTCAAAGTCAGGTATTCCTAATGTTTCTTTTCTTTTAATCTACCCCCCCCCCCCCTCA TGTTAGTCAGTAGTCTAAACACTTGGCAAGTTCAACGTTGTATTGGTAGCTATCAACTTATCTACAAGAAAATGAACAAA ATAAGCTTCGATAAGTGCTCTTTGGTCTGCATCCAAACAGGTACATTATGGTGGTGCATCAGTATGAATTTTCTTTTCTG TGCATATTTGGTGGTAGGAATAATTCTTGCATGAATATAGTACTCATTTGTCATAACCAATTAAAATAACTTTAGCATGA ATTTTGATACCTTTATCATTATTAGTATTAGCCTTGAACGTTGACCTATAGATAGTAGTGACATAGTGTACTTATACAAG AGTTGTTCATTGTGGTAAAATTCTTATGCAGGGATTTGAAGTAGTGTTGCTAGACAAAGAAACTGAGGAACACACACTGG TTCCTGCAGTGGAGGCTTTGTCAAGAAAGGACATTGAAGGGGCAAGGAACTTACTGAGAATCGCGATCCATGTTCTTTTG GTCAGGGCAGTGAACGTGGTGATTCTGGCATCTGATGATCTGCTCGGTGTTCTCCCTCACAATGATCCTCTTCTCAGGAA ATGCATAGACCCCATGGATGCTTTAGCCAGATCAACTATACATTGGGCAGAAACAACAGCAAAGGTACAGCAGAAATTGT AGTATTCCCTTCTTCCAAAATCCTGGCATCATGATTTAACTATTCCTGTAAAAAAGCATATCCGTGTATACATAACCTTT CTTTAAAATATAAAAGAATAAAAAGAGAATTTGTTGTGAAAATTGGTTTTTGCATCACTAAGCAAATAACAATAGTTAAC TTCATGAGTCATGTGAGTTCTTAAAATTTAAACTTCTGAAGTTGACCAATTATGGGGTAGCTCAATAGCAGAATTTAAGA TAGGCTCTCATACCATCTTGATATTCAGGTATGGGCCTAACTTTACATAAAAGCTCATTAGAGCGAAACACTGAAAATTG TACTACCGCTTACAAAGATTATTTTAACCACATTTCTACTCAATACAGAGCCTTAACCATAATGCGTCATTCACCAATAG CAAGAAAGCTGGAAAATATTGAGAATGTCTTGAATGTCAACCTTCCTCCACAACAAAAGAAGCACTAAATTTCAGTGTTC AATCCCCAGTTCTGCAGAAGTAAACAAGCAATGGGTCCAGAACTGTCCTTGAATGAAGTATCATACCAAACAAGCAAAGA AATAACAAGACCAACACTAGCCTTGCATGTTAGATAGTAGAAGAATGGTGCAGTACTACCACAAACTTTAGGTAACATGA GAATATGATCAGTTGTATGGTAAGCACAGGGACAAAATGTAACCAGAACAGAAAGCAGATCTTGTAATATTAATAAGATC ATTGATCATATAGAATATTAGTTGTACATGAAAAAATAATGCAGAATAGAAAATCAAGCTATCAATTTTGAGGAGTGTAG AATCTTCGTAACAACTTGATGAGAAAATTCCATCACCTGCAAGTACCTCTCTATATTCTTGGAGATAAAATGATAGATGA CACAAATAATTTTTATTTCCAACTGTGAAAAATAATTTCAGCCACTCCTATGACTTTGTTGACTTTGTCATAGAACCTAT ATGTCGCTTTGAATTGCATTAACACCATTAACTACATTTGATCTGAGAAGGCCCAAGAGGAAATAAGGTGATGAGCTATT GCATAGGGTCCCGGAACATATATTGGAGCATCTTCCCCACTTTCCACATTGAAATCAGTAGCCAAGCTCCTATTATTATT ATCTACTCCTTTACACATTTGTTCCACCTTAGCTGCTGCAGTTCTTTGGGCTTTCTTGTATTTAGCAGACGCCAATGCTT TTCTTACATCTTCTCTACTGTACCACTTAGCATCTAGATAAGCAAGATGCAGAATCAGTTGCTGCAGATCCAATAAACAG AAGCAAAGGCAATGGGAGATTGTAGTGTGGGAAGGAAGAAAATGCTTTTAGATATTAATCATTGCACAAGTTTATGTCTA AAAAATATGCCATATATACAAAAATAGAGGATTGCAAACGGGAGTGAGGGAAAATGAAGAAAAACAGTATTTTCTCAAGA CATCATCTACTTCTTTCTTCTCTTACTGCTATTTTTCTCTGTGTTTACAAACAAAAAGCTTACCACATACCATTATTTCT AATGACATCTTCCTAACAACTTGCTGCATATTATTTCATGATATTGAAGCTAATACCGAAAGAAAAATAGCCTGTGTAAG TTCACAACCCAAAGGAAATATATGCATGAAGCCTGTCTGACTCACATACAGGTTTTTACAAGTTAACTCACCACTAGAAG TCAAGCTCAAGCATATAAATAAAGGAAAAAGGAATCATCAGCTGGTTAATAGTTAAGTTCAACTAAATAAAGGAAGTCAA TGTACCTTCTAACTCATTCTTGTCCACAGTTATTTCAAGGGATTTTGCATATGCAAAGAATCCAACCATCAGCTGGTATG GAATGCTACTTGGGCCAACTAGCAACAAATGCAATAAAATGATACCATTAAAGTATTCACATATATAAAAAAGGGATAAT ATATTTGTAAACTCGATAAGAAAAATAGTAAAATACACTTTACCACTACACTAGACTATGTTTGGCTGTTTCTGAAGACT ATCTAGTGCATACATACGAGAAGAACTACAAGTTTTAAATAGACTTAACATATTCAAGATATTAACTCTGATTAAGTTAC TTTGATCATGGCCAAACCACCACTTAACTGCAAGTGATTAAATTCACATCTTCCAATAGCCACATATAACAAAAAAGAAG AAGCAAGGGAACAAATAAGATGGATCAAGTGCTGTTGTTAATAACAGGACTGCAAATGTTTGAGCTATTTACAAATTATT CGAACATTAAATTTTGATAAAACTCGTTTGTTTAACTGCACATAAGCTCAAAGCTTGAATTTAGACTGGATTATACAAAT AAGTTAAGCTCAAGCTTAACACTCATCTGACATCTTCACTCTCATCTAATATGCTCCGTTACTGAGTATAAACATAATAC ATTTACTCATTCTACATAGATGGTACAAATTCAATCACAAAAATGTTATATTGTAGATGACAACGTACGTTCTATAGATT TTTCTTCACAAGTTGATTTAACACTAAATGCAGTGCATGTATATGTTAAAAGAAGCAAGCATAGTTACCAAGCAAGTAAT TATATTTCCTTATGAGGAGAAAGACATTATGTAGCCAGAAATCATCATAATAAGAAAATCAAAACTACGTAACCTCACCA GAGTTGTCTCACTAATGAAGATTTTTTTTAAGAAAATATTTTTTCTTTTTTTCTATCATAAATATGATTACTAATAACTA TATTAATTAAACTTAAAAGACACTTCAAGGATAATTTGTTTGAAGGGGAAGAATAATCAAATCATAAATGAGCTAAATAA GTGAAGGTCAAGCCTCATCATTTTAAACAAGTTGAGCTTAAGCTTTAAACTTGGCTTGTTTAAATAAACAATAATGACTA TTTGACATCTATTTCATATACACCGAAATTTCATGCGACATACAGTGGAAACGGAAGAGAGGGATGCAAAGAAGTGTGAA ATAAAAGGGGTCTGACTTAGGTAGCCTTTTTTTCACAAATGAAGCTTGGGCCATCAAATGCTCAGCTTTGTTTGAGTGTT GCTCATATCCCTAAATATTGTACAAATTACCAAAAGATTTTCTATCAGATTGTTATTAACTCAACATTACATGTTTCTCA TAGGCAATAAACAGAGAAGTAATAAAATCATCAAAGCACATAGTTAAATTAACATTAAGTATTGTAGCATGAACCATACC AGGCCACGGTTGAGAACTGTGATATACAACCTCTCCCACTTCAATACCCGTCTCTTCCCATGTTTCTCTTCTCACAGCTT CCTCCAAGCTTTCTCCTGGCTAAATGCAGAGGATACGAACTAATAATTTTTTTATATATGTGAAAAAAGGATCAAAACTA AACAAGTAAACAAACAGTAAAAGATGAATTCTTTAGCCTATGAAACTGAGCTTTATGGGCATCTTTCTTACTTTTATATA AGAATGTTGAACTTTTCAAAGGTTAAAACCTTACAGTGTTTTTTTTACTGTCAGCATGCACCACTACTTACCAACTAGAA GATAGAAATGAAGTCTGAGAATTTCAGACCACAAAAATGGGAGTTTTTTGGGATCACAAACAGAAAATGTCACTTTAGAA GATGAATACTATAGCCATTGCCTGTTATTGTACACAAAACAAAATTCAAATGTATTTCTTCTCTATTTAGTCAGTAAATG GTAGCTAACAGGAACAAGAAATTATGTTTCATGCTGTAACAAAAAAGTGAAAAAACTTTTGAGTGCCTACAAAATTATAA CGGTTTTAAATTCAATTAAGAGATGCACCTCTGTGAAACCAGATAAGCAGCTCCACAATTGATATACATGCTTCGGTCGT TTACCCAAAAGGACAAGATCATTCTCTCTATCAATTACAAGCATAATGACCACCTGCATCAAGGAAGACAGGAAAACACT TGAGCCAAAAAGCACTTGATGATCATCCACACATCAAATCAACACTTGAAACAAAAGCCATCAAACCGGGTCAAGACGTG GATATATCCTCTTTTTGCACGAATCATTGGAACATTTCTTCCGTCTCCCAGCTTCCACAGGGACAGTTTTCTCTCCACAA TGTCCACAAAATCGTGAAGCATTATGCCATTCTAGCAGTGCCTTAGCCTGGCCACGCCAAACCCAATAATTAGAAAGTTG CATTGACATTCCCATTTCCTAACAACTACTAATAGACTAAAATTGATAAAAGGCCAGCAAACTAAGATAACTACTACATA ATTGCTGAAAGCTTCTATAAAATTTTAGTACTTAAAATGAAGAAATATTATAGATTTCAGATTTCACAAGCAATACAATA CAAGCACTAACAAAATCTACTTGTATTTATCATCATGTTACAGGATAACTTACATGACCAGCAATAGCCAAGTCCCCCGT TGCCTTCAAATCCTCCCAGTCAGTAGCCACCATGAGCGTCCGGAGCTCCACAAAACCCAACTCCAATTCCCCACCAAATT CAGGTGCCTTAGCAGAAACATCAATTGCCCATAAAACAGCATCGTCCTCTGCACTCAAACCCAGGTACACCATCGACTCT CCACTCAACTGGGCACCCGTATTTCCCAACATACCCCTGAAATCCTCCAACTCGATCCAACCTAGATGCCAAATCGGCGG CGAGCCACCGGAGCCGGCAGTGGAAGAAGAAGCTAAGGGCTTCCCATTTCTAAACGGCAGCACCTTAAAACTCGGGGAAA GGGAAGAAGAGAGAGTGGTGTCTAGGATTCTGGCGTTGAGAGCTTCTAGAGCTGCAGAGGGTGAAAAGGGGTCATGGGAA ATCGGGAGTTTGGGCCGGAGTGGGTTGCCGGCGAAGGCATGGAACTGCAAGCTCATGGACATGGTTGGTGAGGGAAGAAG AAGATCACTTGGTTTGTAAGATAGACTCTGTTCTGGAAAGAGATTGCAGTGCAGGCGAAGAAGGAGGAAGAAGATTTTCA ACGTGTTGTTTTGAAGGTACAGTACAACAACTGAGGAAACAAAAAGGTTGTCTGGTAATGGTGGTTGGTCTTCGATGAGT GTCTACGGTAATGACACGCTTCATGTTCTGGATTTTGGGTCCCAATCATTAAAATATCAAATACAAAAGTCAATTTTTCT CACCTTTTTAGTCTTTTTGGATAATTTGCTATTTGCTATGAATTTGCCATCCGG 

CDS sequence (LotjaGi4g1v0268800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATAGAAGGGGGCATAGTGATGTCCATACAGACACCAAATCACCCTCTATTTCTTACTGGTGATGCCTTTAAAAAGAG AATTCAGACTCAAAGCAGAACAAGATCAAGTTCAGGTACAGTTTTGCAGGTTTCTTCAGCTCTGCTTACAGATGAGAATG GAAGCTATCCAGAACCAGGTACTTCCTTCATGAGATGTAAGAGACCTTCTTGCCTTCTAAGCCAACCAAACACTGTTGGT GTTATAGGTGGTGTATCAGTACTATCAACTCTTATTTTCTTGGAAAAGCTTGCTTATTGGGGTTCAAGAAATGGTAAGGA ATGTCCGCCTTTTGTGGTCTGCAGTGATCCTATGTTAAGCAAAGTGCTTTCATCACGCGGTCCCTTTCCTTCTGCAAGGA GCAGAATGGCTCATATCAAACTGAAGCAGGACCAGGTAATTGAGAATTTGAAGTACACAATGAACTTTCTTCAGCAGTCC GGTGCGCGTGGCTTGGCCATGCCCTGCCATCTATCACACGCGTGGCACGGCGAAATTTCGGAGGATGGTTCCCTTCCATT TCTTCATGTTGGTGACTGTGTGGCCATGGAACTCAAGAAAGCTAAGCTGAAGCCAATTCATGCTACAAATACTGTGCGGA TTGGACTGCTTACTACAGATTCCCTTTTTGTAGGTAGTTATTACCAGGATAAGCTTCAAAGTCAGGGATTTGAAGTAGTG TTGCTAGACAAAGAAACTGAGGAACACACACTGGTTCCTGCAGTGGAGGCTTTGTCAAGAAAGGACATTGAAGGGGCAAG GAACTTACTGAGAATCGCGATCCATGTTCTTTTGGTCAGGGCAGTGAACGTGGTGATTCTGGCATCTGATGATCTGCTCG GTGTTCTCCCTCACAATGATCCTCTTCTCAGGAAATGCATAGACCCCATGGATGCTTTAGCCAGATCAACTATACATTGG GCAGAAACAACAGCAAAGGATAACTTACATGACCAGCAATAG 

Protein sequence (LotjaGi4g1v0268800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIEGGIVMSIQTPNHPLFLTGDAFKKRIQTQSRTRSSSGTVLQVSSALLTDENGSYPEPGTSFMRCKRPSCLLSQPNTVG VIGGVSVLSTLIFLEKLAYWGSRNGKECPPFVVCSDPMLSKVLSSRGPFPSARSRMAHIKLKQDQVIENLKYTMNFLQQS GARGLAMPCHLSHAWHGEISEDGSLPFLHVGDCVAMELKKAKLKPIHATNTVRIGLLTTDSLFVGSYYQDKLQSQGFEVV LLDKETEEHTLVPAVEALSRKDIEGARNLLRIAIHVLLVRAVNVVILASDDLLGVLPHNDPLLRKCIDPMDALARSTIHW AETTAKDNLHDQQ 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 326 326 1.0E-160
PANTHER 1 326 326 1.0E-160
Gene3D 78 315 238 2.9E-40
SUPERFAMILY 78 200 123 4.45E-15
Pfam 82 318 237 1.3E-29
Gene3D 192 309 118 2.9E-40
SUPERFAMILY 213 321 109 3.6E-12

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Molecular function Racemase and epimerase activity, acting on amino acids and derivatives Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.
Molecular function Racemase activity, acting on amino acids and derivatives Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0268800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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