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LotjaGi4g1v0268800.2

Overview

Field Value
Gene ID LotjaGi4g1v0268800
Transcript ID LotjaGi4g1v0268800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Aspartate racemase; TAIR: AT1G15410.1 aspartate-glutamate racemase family; Swiss-Prot: sp|O58403|RACD_PYRHO Aspartate racemase; TrEMBL-Plants: tr|A0A0L9TSD3|A0A0L9TSD3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0268800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:63422353..63429181) extracted from Lotus japonicus Gifu genome v1.2.

TAATCCCCACCTTTACTCCGGCGAGGGACTAAAGCCATATTTATGACAAAGGTTAGGGACCAAAAACTTGATTAAGCCTC CGTTAAATATGTAGACATATGATTTCGAGCAGATATTCGATTGACATACGGTTTAGCGGCGATTTTAACTGTCGGCCGCT AAACTTTATCTCACTCTATATCATATGTGGAGTAACATTAGCTTATAGAAAAATGTATTCATTCTACATAGTACTAGATA TTTAATGGTGAAGACCGCAAGCAAATAATTAGTGATGGGGAGTGGGGACAACCACTCAGCACAAGACACATTTCCTGTGA CAACCATTGAGCATAAGACAAATAATTCTTCCCTTTCTTTAACTTGAAAATTTCAGAAAATATTCCATTGGCTAGTGTGT ATGAAGCAAAGCAATCAGACTATCAGAGGAAAGAGTTGATTGGTGCATGAACATGACGTCCTCAGATTTCATCAAAAGCA CACGTATCAAATCTTCATTCATTCCTGTGTAGTCCTTGCAGAAAGAAACGAAATGGTATCTAATAATTCAGTAAGACAAA CAAACCGCAGAGACATGATATCACATGTATGGCGGCTGAAGATCATAAAATAACAGTTTGCAGTAGTTTTAATGGACGGA CCATCACTAACGTTGGTATGTTACAATAATGAAACCTTGGCCCTTAGTGAAAATTAATAATAGATATAATGCAAGTGGAC AATTATACAACCACTAAAAGACAGACCACAAATATCTTAAGGTTAATTGTTGTTACCTACCTATATTTGGATGTAGTGGT AAATCACGGTGAAACCAAAATCACGGTAGACAGCCCCAAAAGCTAAGGGAAGTTACTCCTGTCTACTTGTCTACTGTGAT TTTGGCTCACCGTGTATCCATACATGCACTAAGATCCTTGGAGGTTATTTGAATTTGAACTATAGCCCCTTTAGTCATCG AACATGTCTTGTGTACCTGCGGTTCTGGCTTTAGAATCTGTGCTAAGATTGGCTAGAATCCGAAAGCTGAAACCCATGAA AGCTCAGCAACACTCCTGGATTTTAGTGCTGTGTTGACTGTGACAAAATTATCTTTCAAGGGCACTTGTCAAGTTTTCAC TGGTAAAGATGGTAAAACTGATGGAAAGAACATCTATACATAGATGTATAAAGTTCTGACACATTCAGAGAAAAGCATCT TGTAGATTGTTAGAGATGATAGAAGGGGGCATAGTGATGTCCATACAGACACCAAATCACCCTCTATTTCTTACTGGTGA TGCCTTTAAAAAGAGAATTCAGACTCAAAGCAGAACAAGATCAAGTTCAGGTACAGTTTTGCAGGTTTCTTCAGCTCTGC TTACAGATGAGAATGGAAGCTATCCAGAACCAGGTACTTCCTTCATGAGATGTAAGAGACCTTCTTGCCTTCTAAGCCAA CCAAACACTGTTGGTGTTATAGGTGGTGTATCAGTACTATCAACTCTTATTTTCTTGGAAAAGCTTGCTTATTGGGGTTC AAGAAATGGTAAGGAATGTCCGCCTTTTGTGGTCTGCAGTGATCCTATGTTAAGCAAAGTGCTTTCATCACGCGGTCCCT TTCCTTCTGCAAGGAGCAGAATGGCTCATATCAAACTGAAGCAGGACCAGGTAATTGAGAATTTGAAGTACACAATGAAC TTTCTTCAGCAGTCCGGTGCGCGTGGCTTGGCCATGCCCTGCCATCTATCACACGCGTGGCACGGCGAAATTTCGGAGGA TGGTTCCCTTCCATTTCTTCATGTTGGTGACTGTGTGGCCATGGAACTCAAGAAAGCTAAGCTGAAGCCAATTCATGCTA CAAATACTGTGCGGATTGGACTGCTTACTACAGATTCCCTTTTTGTAGGTAGTTATTACCAGGATAAGCTTCAAAGTCAG GTATTCCTAATGTTTCTTTTCTTTTAATCTACCCCCCCCCCCCCTCATGTTAGTCAGTAGTCTAAACACTTGGCAAGTTC AACGTTGTATTGGTAGCTATCAACTTATCTACAAGAAAATGAACAAAATAAGCTTCGATAAGTGCTCTTTGGTCTGCATC CAAACAGGTACATTATGGTGGTGCATCAGTATGAATTTTCTTTTCTGTGCATATTTGGTGGTAGGAATAATTCTTGCATG AATATAGTACTCATTTGTCATAACCAATTAAAATAACTTTAGCATGAATTTTGATACCTTTATCATTATTAGTATTAGCC TTGAACGTTGACCTATAGATAGTAGTGACATAGTGTACTTATACAAGAGTTGTTCATTGTGGTAAAATTCTTATGCAGGG ATTTGAAGTAGTGTTGCTAGACAAAGAAACTGAGGAACACACACTGGTTCCTGCAGTGGAGGCTTTGTCAAGAAAGGACA TTGAAGGGGCAAGGAACTTACTGAGAATCGCGATCCATGTTCTTTTGGTCAGGGCAGTGAACGTGGTGATTCTGGCATCT GATGATCTGCTCGGTGTTCTCCCTCACAATGATCCTCTTCTCAGGAAATGCATAGACCCCATGGATGCTTTAGCCAGATC AACTATACATTGGGCAGAAACAACAGCAAAGGTACAGCAGAAATTGTAGTATTCCCTTCTTCCAAAATCCTGGCATCATG ATTTAACTATTCCTGTAAAAAAGCATATCCGTGTATACATAACCTTTCTTTAAAATATAAAAGAATAAAAAGAGAATTTG TTGTGAAAATTGGTTTTTGCATCACTAAGCAAATAACAATAGTTAACTTCATGAGTCATGTGAGTTCTTAAAATTTAAAC TTCTGAAGTTGACCAATTATGGGGTAGCTCAATAGCAGAATTTAAGATAGGCTCTCATACCATCTTGATATTCAGGTATG GGCCTAACTTTACATAAAAGCTCATTAGAGCGAAACACTGAAAATTGTACTACCGCTTACAAAGATTATTTTAACCACAT TTCTACTCAATACAGAGCCTTAACCATAATGCGTCATTCACCAATAGCAAGAAAGCTGGAAAATATTGAGAATGTCTTGA ATGTCAACCTTCCTCCACAACAAAAGAAGCACTAAATTTCAGTGTTCAATCCCCAGTTCTGCAGAAGTAAACAAGCAATG GGTCCAGAACTGTCCTTGAATGAAGTATCATACCAAACAAGCAAAGAAATAACAAGACCAACACTAGCCTTGCATGTTAG ATAGTAGAAGAATGGTGCAGTACTACCACAAACTTTAGGTAACATGAGAATATGATCAGTTGTATGGTAAGCACAGGGAC AAAATGTAACCAGAACAGAAAGCAGATCTTGTAATATTAATAAGATCATTGATCATATAGAATATTAGTTGTACATGAAA AAATAATGCAGAATAGAAAATCAAGCTATCAATTTTGAGGAGTGTAGAATCTTCGTAACAACTTGATGAGAAAATTCCAT CACCTGCAAGTACCTCTCTATATTCTTGGAGATAAAATGATAGATGACACAAATAATTTTTATTTCCAACTGTGAAAAAT AATTTCAGCCACTCCTATGACTTTGTTGACTTTGTCATAGAACCTATATGTCGCTTTGAATTGCATTAACACCATTAACT ACATTTGATCTGAGAAGGCCCAAGAGGAAATAAGGTGATGAGCTATTGCATAGGGTCCCGGAACATATATTGGAGCATCT TCCCCACTTTCCACATTGAAATCAGTAGCCAAGCTCCTATTATTATTATCTACTCCTTTACACATTTGTTCCACCTTAGC TGCTGCAGTTCTTTGGGCTTTCTTGTATTTAGCAGACGCCAATGCTTTTCTTACATCTTCTCTACTGTACCACTTAGCAT CTAGATAAGCAAGATGCAGAATCAGTTGCTGCAGATCCAATAAACAGAAGCAAAGGCAATGGGAGATTGTAGTGTGGGAA GGAAGAAAATGCTTTTAGATATTAATCATTGCACAAGTTTATGTCTAAAAAATATGCCATATATACAAAAATAGAGGATT GCAAACGGGAGTGAGGGAAAATGAAGAAAAACAGTATTTTCTCAAGACATCATCTACTTCTTTCTTCTCTTACTGCTATT TTTCTCTGTGTTTACAAACAAAAAGCTTACCACATACCATTATTTCTAATGACATCTTCCTAACAACTTGCTGCATATTA TTTCATGATATTGAAGCTAATACCGAAAGAAAAATAGCCTGTGTAAGTTCACAACCCAAAGGAAATATATGCATGAAGCC TGTCTGACTCACATACAGGTTTTTACAAGTTAACTCACCACTAGAAGTCAAGCTCAAGCATATAAATAAAGGAAAAAGGA ATCATCAGCTGGTTAATAGTTAAGTTCAACTAAATAAAGGAAGTCAATGTACCTTCTAACTCATTCTTGTCCACAGTTAT TTCAAGGGATTTTGCATATGCAAAGAATCCAACCATCAGCTGGTATGGAATGCTACTTGGGCCAACTAGCAACAAATGCA ATAAAATGATACCATTAAAGTATTCACATATATAAAAAAGGGATAATATATTTGTAAACTCGATAAGAAAAATAGTAAAA TACACTTTACCACTACACTAGACTATGTTTGGCTGTTTCTGAAGACTATCTAGTGCATACATACGAGAAGAACTACAAGT TTTAAATAGACTTAACATATTCAAGATATTAACTCTGATTAAGTTACTTTGATCATGGCCAAACCACCACTTAACTGCAA GTGATTAAATTCACATCTTCCAATAGCCACATATAACAAAAAAGAAGAAGCAAGGGAACAAATAAGATGGATCAAGTGCT GTTGTTAATAACAGGACTGCAAATGTTTGAGCTATTTACAAATTATTCGAACATTAAATTTTGATAAAACTCGTTTGTTT AACTGCACATAAGCTCAAAGCTTGAATTTAGACTGGATTATACAAATAAGTTAAGCTCAAGCTTAACACTCATCTGACAT CTTCACTCTCATCTAATATGCTCCGTTACTGAGTATAAACATAATACATTTACTCATTCTACATAGATGGTACAAATTCA ATCACAAAAATGTTATATTGTAGATGACAACGTACGTTCTATAGATTTTTCTTCACAAGTTGATTTAACACTAAATGCAG TGCATGTATATGTTAAAAGAAGCAAGCATAGTTACCAAGCAAGTAATTATATTTCCTTATGAGGAGAAAGACATTATGTA GCCAGAAATCATCATAATAAGAAAATCAAAACTACGTAACCTCACCAGAGTTGTCTCACTAATGAAGATTTTTTTTAAGA AAATATTTTTTCTTTTTTTCTATCATAAATATGATTACTAATAACTATATTAATTAAACTTAAAAGACACTTCAAGGATA ATTTGTTTGAAGGGGAAGAATAATCAAATCATAAATGAGCTAAATAAGTGAAGGTCAAGCCTCATCATTTTAAACAAGTT GAGCTTAAGCTTTAAACTTGGCTTGTTTAAATAAACAATAATGACTATTTGACATCTATTTCATATACACCGAAATTTCA TGCGACATACAGTGGAAACGGAAGAGAGGGATGCAAAGAAGTGTGAAATAAAAGGGGTCTGACTTAGGTAGCCTTTTTTT CACAAATGAAGCTTGGGCCATCAAATGCTCAGCTTTGTTTGAGTGTTGCTCATATCCCTAAATATTGTACAAATTACCAA AAGATTTTCTATCAGATTGTTATTAACTCAACATTACATGTTTCTCATAGGCAATAAACAGAGAAGTAATAAAATCATCA AAGCACATAGTTAAATTAACATTAAGTATTGTAGCATGAACCATACCAGGCCACGGTTGAGAACTGTGATATACAACCTC TCCCACTTCAATACCCGTCTCTTCCCATGTTTCTCTTCTCACAGCTTCCTCCAAGCTTTCTCCTGGCTAAATGCAGAGGA TACGAACTAATAATTTTTTTATATATGTGAAAAAAGGATCAAAACTAAACAAGTAAACAAACAGTAAAAGATGAATTCTT TAGCCTATGAAACTGAGCTTTATGGGCATCTTTCTTACTTTTATATAAGAATGTTGAACTTTTCAAAGGTTAAAACCTTA CAGTGTTTTTTTTACTGTCAGCATGCACCACTACTTACCAACTAGAAGATAGAAATGAAGTCTGAGAATTTCAGACCACA AAAATGGGAGTTTTTTGGGATCACAAACAGAAAATGTCACTTTAGAAGATGAATACTATAGCCATTGCCTGTTATTGTAC ACAAAACAAAATTCAAATGTATTTCTTCTCTATTTAGTCAGTAAATGGTAGCTAACAGGAACAAGAAATTATGTTTCATG CTGTAACAAAAAAGTGAAAAAACTTTTGAGTGCCTACAAAATTATAACGGTTTTAAATTCAATTAAGAGATGCACCTCTG TGAAACCAGATAAGCAGCTCCACAATTGATATACATGCTTCGGTCGTTTACCCAAAAGGACAAGATCATTCTCTCTATCA ATTACAAGCATAATGACCACCTGCATCAAGGAAGACAGGAAAACACTTGAGCCAAAAAGCACTTGATGATCATCCACACA TCAAATCAACACTTGAAACAAAAGCCATCAAACCGGGTCAAGACGTGGATATATCCTCTTTTTGCACGAATCATTGGAAC ATTTCTTCCGTCTCCCAGCTTCCACAGGGACAGTTTTCTCTCCACAATGTCCACAAAATCGTGAAGCATTATGCCATTCT AGCAGTGCCTTAGCCTGGCCACGCCAAACCCAATAATTAGAAAGTTGCATTGACATTCCCATTTCCTAACAACTACTAAT AGACTAAAATTGATAAAAGGCCAGCAAAC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0268800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATAGAAGGGGGCATAGTGATGTCCATACAGACACCAAATCACCCTCTATTTCTTACTGGTGATGCCTTTAAAAAGAG AATTCAGACTCAAAGCAGAACAAGATCAAGTTCAGGTACAGTTTTGCAGGTTTCTTCAGCTCTGCTTACAGATGAGAATG GAAGCTATCCAGAACCAGGTACTTCCTTCATGAGATGTAAGAGACCTTCTTGCCTTCTAAGCCAACCAAACACTGTTGGT GTTATAGGTGGTGTATCAGTACTATCAACTCTTATTTTCTTGGAAAAGCTTGCTTATTGGGGTTCAAGAAATGGTAAGGA ATGTCCGCCTTTTGTGGTCTGCAGTGATCCTATGTTAAGCAAAGTGCTTTCATCACGCGGTCCCTTTCCTTCTGCAAGGA GCAGAATGGCTCATATCAAACTGAAGCAGGACCAGGTAATTGAGAATTTGAAGTACACAATGAACTTTCTTCAGCAGTCC GGTGCGCGTGGCTTGGCCATGCCCTGCCATCTATCACACGCGTGGCACGGCGAAATTTCGGAGGATGGTTCCCTTCCATT TCTTCATGTTGGTGACTGTGTGGCCATGGAACTCAAGAAAGCTAAGCTGAAGCCAATTCATGCTACAAATACTGTGCGGA TTGGACTGCTTACTACAGATTCCCTTTTTGTAGGTAGTTATTACCAGGATAAGCTTCAAAGTCAGGGATTTGAAGTAGTG TTGCTAGACAAAGAAACTGAGGAACACACACTGGTTCCTGCAGTGGAGGCTTTGTCAAGAAAGGACATTGAAGGGGCAAG GAACTTACTGAGAATCGCGATCCATGTTCTTTTGGTCAGGGCAGTGAACGTGGTGATTCTGGCATCTGATGATCTGCTCG GTGTTCTCCCTCACAATGATCCTCTTCTCAGGAAATGCATAGACCCCATGGATGCTTTAGCCAGATCAACTATACATTGG GCAGAAACAACAGCAAAGAGCCTTAACCATAATGCGTCATTCACCAATAGCAAGAAAGCTGGAAAATATTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0268800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIEGGIVMSIQTPNHPLFLTGDAFKKRIQTQSRTRSSSGTVLQVSSALLTDENGSYPEPGTSFMRCKRPSCLLSQPNTVG VIGGVSVLSTLIFLEKLAYWGSRNGKECPPFVVCSDPMLSKVLSSRGPFPSARSRMAHIKLKQDQVIENLKYTMNFLQQS GARGLAMPCHLSHAWHGEISEDGSLPFLHVGDCVAMELKKAKLKPIHATNTVRIGLLTTDSLFVGSYYQDKLQSQGFEVV LLDKETEEHTLVPAVEALSRKDIEGARNLLRIAIHVLLVRAVNVVILASDDLLGVLPHNDPLLRKCIDPMDALARSTIHW AETTAKSLNHNASFTNSKKAGKY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR21198
1 326 326 1.0E-160 –
PANTHER
PTHR21198:SF9
1 326 326 1.0E-160 –
Gene3D
G3DSA:3.40.50.1860
78 315 238 3.2E-40 –
SUPERFAMILY
SSF53681
78 200 123 4.84E-15
IPR001920
Pfam
PF01177
82 318 237 1.5E-29
IPR015942
Gene3D
G3DSA:3.40.50.1860
192 309 118 3.2E-40 –
SUPERFAMILY
SSF53681
213 321 109 3.76E-12
IPR001920

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006807
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Subterm of
GO:0016855
Molecular function Racemase and epimerase activity, acting on amino acids and derivatives Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.
Subterm of
GO:0036361
Molecular function Racemase activity, acting on amino acids and derivatives Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0268800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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