Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0268800.2

Overview

Field Value
Gene ID LotjaGi4g1v0268800
Transcript ID LotjaGi4g1v0268800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Aspartate racemase; TAIR: AT1G15410.1 aspartate-glutamate racemase family; Swiss-Prot: sp|O58403|RACD_PYRHO Aspartate racemase; TrEMBL-Plants: tr|A0A0L9TSD3|A0A0L9TSD3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0268800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:63422353..63429181) extracted from Lotus japonicus Gifu genome v1.2.

TAATCCCCACCTTTACTCCGGCGAGGGACTAAAGCCATATTTATGACAAAGGTTAGGGACCAAAAACTTGATTAAGCCTC CGTTAAATATGTAGACATATGATTTCGAGCAGATATTCGATTGACATACGGTTTAGCGGCGATTTTAACTGTCGGCCGCT AAACTTTATCTCACTCTATATCATATGTGGAGTAACATTAGCTTATAGAAAAATGTATTCATTCTACATAGTACTAGATA TTTAATGGTGAAGACCGCAAGCAAATAATTAGTGATGGGGAGTGGGGACAACCACTCAGCACAAGACACATTTCCTGTGA CAACCATTGAGCATAAGACAAATAATTCTTCCCTTTCTTTAACTTGAAAATTTCAGAAAATATTCCATTGGCTAGTGTGT ATGAAGCAAAGCAATCAGACTATCAGAGGAAAGAGTTGATTGGTGCATGAACATGACGTCCTCAGATTTCATCAAAAGCA CACGTATCAAATCTTCATTCATTCCTGTGTAGTCCTTGCAGAAAGAAACGAAATGGTATCTAATAATTCAGTAAGACAAA CAAACCGCAGAGACATGATATCACATGTATGGCGGCTGAAGATCATAAAATAACAGTTTGCAGTAGTTTTAATGGACGGA CCATCACTAACGTTGGTATGTTACAATAATGAAACCTTGGCCCTTAGTGAAAATTAATAATAGATATAATGCAAGTGGAC AATTATACAACCACTAAAAGACAGACCACAAATATCTTAAGGTTAATTGTTGTTACCTACCTATATTTGGATGTAGTGGT AAATCACGGTGAAACCAAAATCACGGTAGACAGCCCCAAAAGCTAAGGGAAGTTACTCCTGTCTACTTGTCTACTGTGAT TTTGGCTCACCGTGTATCCATACATGCACTAAGATCCTTGGAGGTTATTTGAATTTGAACTATAGCCCCTTTAGTCATCG AACATGTCTTGTGTACCTGCGGTTCTGGCTTTAGAATCTGTGCTAAGATTGGCTAGAATCCGAAAGCTGAAACCCATGAA AGCTCAGCAACACTCCTGGATTTTAGTGCTGTGTTGACTGTGACAAAATTATCTTTCAAGGGCACTTGTCAAGTTTTCAC TGGTAAAGATGGTAAAACTGATGGAAAGAACATCTATACATAGATGTATAAAGTTCTGACACATTCAGAGAAAAGCATCT TGTAGATTGTTAGAGATGATAGAAGGGGGCATAGTGATGTCCATACAGACACCAAATCACCCTCTATTTCTTACTGGTGA TGCCTTTAAAAAGAGAATTCAGACTCAAAGCAGAACAAGATCAAGTTCAGGTACAGTTTTGCAGGTTTCTTCAGCTCTGC TTACAGATGAGAATGGAAGCTATCCAGAACCAGGTACTTCCTTCATGAGATGTAAGAGACCTTCTTGCCTTCTAAGCCAA CCAAACACTGTTGGTGTTATAGGTGGTGTATCAGTACTATCAACTCTTATTTTCTTGGAAAAGCTTGCTTATTGGGGTTC AAGAAATGGTAAGGAATGTCCGCCTTTTGTGGTCTGCAGTGATCCTATGTTAAGCAAAGTGCTTTCATCACGCGGTCCCT TTCCTTCTGCAAGGAGCAGAATGGCTCATATCAAACTGAAGCAGGACCAGGTAATTGAGAATTTGAAGTACACAATGAAC TTTCTTCAGCAGTCCGGTGCGCGTGGCTTGGCCATGCCCTGCCATCTATCACACGCGTGGCACGGCGAAATTTCGGAGGA TGGTTCCCTTCCATTTCTTCATGTTGGTGACTGTGTGGCCATGGAACTCAAGAAAGCTAAGCTGAAGCCAATTCATGCTA CAAATACTGTGCGGATTGGACTGCTTACTACAGATTCCCTTTTTGTAGGTAGTTATTACCAGGATAAGCTTCAAAGTCAG GTATTCCTAATGTTTCTTTTCTTTTAATCTACCCCCCCCCCCCCTCATGTTAGTCAGTAGTCTAAACACTTGGCAAGTTC AACGTTGTATTGGTAGCTATCAACTTATCTACAAGAAAATGAACAAAATAAGCTTCGATAAGTGCTCTTTGGTCTGCATC CAAACAGGTACATTATGGTGGTGCATCAGTATGAATTTTCTTTTCTGTGCATATTTGGTGGTAGGAATAATTCTTGCATG AATATAGTACTCATTTGTCATAACCAATTAAAATAACTTTAGCATGAATTTTGATACCTTTATCATTATTAGTATTAGCC TTGAACGTTGACCTATAGATAGTAGTGACATAGTGTACTTATACAAGAGTTGTTCATTGTGGTAAAATTCTTATGCAGGG ATTTGAAGTAGTGTTGCTAGACAAAGAAACTGAGGAACACACACTGGTTCCTGCAGTGGAGGCTTTGTCAAGAAAGGACA TTGAAGGGGCAAGGAACTTACTGAGAATCGCGATCCATGTTCTTTTGGTCAGGGCAGTGAACGTGGTGATTCTGGCATCT GATGATCTGCTCGGTGTTCTCCCTCACAATGATCCTCTTCTCAGGAAATGCATAGACCCCATGGATGCTTTAGCCAGATC AACTATACATTGGGCAGAAACAACAGCAAAGGTACAGCAGAAATTGTAGTATTCCCTTCTTCCAAAATCCTGGCATCATG ATTTAACTATTCCTGTAAAAAAGCATATCCGTGTATACATAACCTTTCTTTAAAATATAAAAGAATAAAAAGAGAATTTG TTGTGAAAATTGGTTTTTGCATCACTAAGCAAATAACAATAGTTAACTTCATGAGTCATGTGAGTTCTTAAAATTTAAAC TTCTGAAGTTGACCAATTATGGGGTAGCTCAATAGCAGAATTTAAGATAGGCTCTCATACCATCTTGATATTCAGGTATG GGCCTAACTTTACATAAAAGCTCATTAGAGCGAAACACTGAAAATTGTACTACCGCTTACAAAGATTATTTTAACCACAT TTCTACTCAATACAGAGCCTTAACCATAATGCGTCATTCACCAATAGCAAGAAAGCTGGAAAATATTGAGAATGTCTTGA ATGTCAACCTTCCTCCACAACAAAAGAAGCACTAAATTTCAGTGTTCAATCCCCAGTTCTGCAGAAGTAAACAAGCAATG GGTCCAGAACTGTCCTTGAATGAAGTATCATACCAAACAAGCAAAGAAATAACAAGACCAACACTAGCCTTGCATGTTAG ATAGTAGAAGAATGGTGCAGTACTACCACAAACTTTAGGTAACATGAGAATATGATCAGTTGTATGGTAAGCACAGGGAC AAAATGTAACCAGAACAGAAAGCAGATCTTGTAATATTAATAAGATCATTGATCATATAGAATATTAGTTGTACATGAAA AAATAATGCAGAATAGAAAATCAAGCTATCAATTTTGAGGAGTGTAGAATCTTCGTAACAACTTGATGAGAAAATTCCAT CACCTGCAAGTACCTCTCTATATTCTTGGAGATAAAATGATAGATGACACAAATAATTTTTATTTCCAACTGTGAAAAAT AATTTCAGCCACTCCTATGACTTTGTTGACTTTGTCATAGAACCTATATGTCGCTTTGAATTGCATTAACACCATTAACT ACATTTGATCTGAGAAGGCCCAAGAGGAAATAAGGTGATGAGCTATTGCATAGGGTCCCGGAACATATATTGGAGCATCT TCCCCACTTTCCACATTGAAATCAGTAGCCAAGCTCCTATTATTATTATCTACTCCTTTACACATTTGTTCCACCTTAGC TGCTGCAGTTCTTTGGGCTTTCTTGTATTTAGCAGACGCCAATGCTTTTCTTACATCTTCTCTACTGTACCACTTAGCAT CTAGATAAGCAAGATGCAGAATCAGTTGCTGCAGATCCAATAAACAGAAGCAAAGGCAATGGGAGATTGTAGTGTGGGAA GGAAGAAAATGCTTTTAGATATTAATCATTGCACAAGTTTATGTCTAAAAAATATGCCATATATACAAAAATAGAGGATT GCAAACGGGAGTGAGGGAAAATGAAGAAAAACAGTATTTTCTCAAGACATCATCTACTTCTTTCTTCTCTTACTGCTATT TTTCTCTGTGTTTACAAACAAAAAGCTTACCACATACCATTATTTCTAATGACATCTTCCTAACAACTTGCTGCATATTA TTTCATGATATTGAAGCTAATACCGAAAGAAAAATAGCCTGTGTAAGTTCACAACCCAAAGGAAATATATGCATGAAGCC TGTCTGACTCACATACAGGTTTTTACAAGTTAACTCACCACTAGAAGTCAAGCTCAAGCATATAAATAAAGGAAAAAGGA ATCATCAGCTGGTTAATAGTTAAGTTCAACTAAATAAAGGAAGTCAATGTACCTTCTAACTCATTCTTGTCCACAGTTAT TTCAAGGGATTTTGCATATGCAAAGAATCCAACCATCAGCTGGTATGGAATGCTACTTGGGCCAACTAGCAACAAATGCA ATAAAATGATACCATTAAAGTATTCACATATATAAAAAAGGGATAATATATTTGTAAACTCGATAAGAAAAATAGTAAAA TACACTTTACCACTACACTAGACTATGTTTGGCTGTTTCTGAAGACTATCTAGTGCATACATACGAGAAGAACTACAAGT TTTAAATAGACTTAACATATTCAAGATATTAACTCTGATTAAGTTACTTTGATCATGGCCAAACCACCACTTAACTGCAA GTGATTAAATTCACATCTTCCAATAGCCACATATAACAAAAAAGAAGAAGCAAGGGAACAAATAAGATGGATCAAGTGCT GTTGTTAATAACAGGACTGCAAATGTTTGAGCTATTTACAAATTATTCGAACATTAAATTTTGATAAAACTCGTTTGTTT AACTGCACATAAGCTCAAAGCTTGAATTTAGACTGGATTATACAAATAAGTTAAGCTCAAGCTTAACACTCATCTGACAT CTTCACTCTCATCTAATATGCTCCGTTACTGAGTATAAACATAATACATTTACTCATTCTACATAGATGGTACAAATTCA ATCACAAAAATGTTATATTGTAGATGACAACGTACGTTCTATAGATTTTTCTTCACAAGTTGATTTAACACTAAATGCAG TGCATGTATATGTTAAAAGAAGCAAGCATAGTTACCAAGCAAGTAATTATATTTCCTTATGAGGAGAAAGACATTATGTA GCCAGAAATCATCATAATAAGAAAATCAAAACTACGTAACCTCACCAGAGTTGTCTCACTAATGAAGATTTTTTTTAAGA AAATATTTTTTCTTTTTTTCTATCATAAATATGATTACTAATAACTATATTAATTAAACTTAAAAGACACTTCAAGGATA ATTTGTTTGAAGGGGAAGAATAATCAAATCATAAATGAGCTAAATAAGTGAAGGTCAAGCCTCATCATTTTAAACAAGTT GAGCTTAAGCTTTAAACTTGGCTTGTTTAAATAAACAATAATGACTATTTGACATCTATTTCATATACACCGAAATTTCA TGCGACATACAGTGGAAACGGAAGAGAGGGATGCAAAGAAGTGTGAAATAAAAGGGGTCTGACTTAGGTAGCCTTTTTTT CACAAATGAAGCTTGGGCCATCAAATGCTCAGCTTTGTTTGAGTGTTGCTCATATCCCTAAATATTGTACAAATTACCAA AAGATTTTCTATCAGATTGTTATTAACTCAACATTACATGTTTCTCATAGGCAATAAACAGAGAAGTAATAAAATCATCA AAGCACATAGTTAAATTAACATTAAGTATTGTAGCATGAACCATACCAGGCCACGGTTGAGAACTGTGATATACAACCTC TCCCACTTCAATACCCGTCTCTTCCCATGTTTCTCTTCTCACAGCTTCCTCCAAGCTTTCTCCTGGCTAAATGCAGAGGA TACGAACTAATAATTTTTTTATATATGTGAAAAAAGGATCAAAACTAAACAAGTAAACAAACAGTAAAAGATGAATTCTT TAGCCTATGAAACTGAGCTTTATGGGCATCTTTCTTACTTTTATATAAGAATGTTGAACTTTTCAAAGGTTAAAACCTTA CAGTGTTTTTTTTACTGTCAGCATGCACCACTACTTACCAACTAGAAGATAGAAATGAAGTCTGAGAATTTCAGACCACA AAAATGGGAGTTTTTTGGGATCACAAACAGAAAATGTCACTTTAGAAGATGAATACTATAGCCATTGCCTGTTATTGTAC ACAAAACAAAATTCAAATGTATTTCTTCTCTATTTAGTCAGTAAATGGTAGCTAACAGGAACAAGAAATTATGTTTCATG CTGTAACAAAAAAGTGAAAAAACTTTTGAGTGCCTACAAAATTATAACGGTTTTAAATTCAATTAAGAGATGCACCTCTG TGAAACCAGATAAGCAGCTCCACAATTGATATACATGCTTCGGTCGTTTACCCAAAAGGACAAGATCATTCTCTCTATCA ATTACAAGCATAATGACCACCTGCATCAAGGAAGACAGGAAAACACTTGAGCCAAAAAGCACTTGATGATCATCCACACA TCAAATCAACACTTGAAACAAAAGCCATCAAACCGGGTCAAGACGTGGATATATCCTCTTTTTGCACGAATCATTGGAAC ATTTCTTCCGTCTCCCAGCTTCCACAGGGACAGTTTTCTCTCCACAATGTCCACAAAATCGTGAAGCATTATGCCATTCT AGCAGTGCCTTAGCCTGGCCACGCCAAACCCAATAATTAGAAAGTTGCATTGACATTCCCATTTCCTAACAACTACTAAT AGACTAAAATTGATAAAAGGCCAGCAAAC 

CDS sequence (LotjaGi4g1v0268800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATAGAAGGGGGCATAGTGATGTCCATACAGACACCAAATCACCCTCTATTTCTTACTGGTGATGCCTTTAAAAAGAG AATTCAGACTCAAAGCAGAACAAGATCAAGTTCAGGTACAGTTTTGCAGGTTTCTTCAGCTCTGCTTACAGATGAGAATG GAAGCTATCCAGAACCAGGTACTTCCTTCATGAGATGTAAGAGACCTTCTTGCCTTCTAAGCCAACCAAACACTGTTGGT GTTATAGGTGGTGTATCAGTACTATCAACTCTTATTTTCTTGGAAAAGCTTGCTTATTGGGGTTCAAGAAATGGTAAGGA ATGTCCGCCTTTTGTGGTCTGCAGTGATCCTATGTTAAGCAAAGTGCTTTCATCACGCGGTCCCTTTCCTTCTGCAAGGA GCAGAATGGCTCATATCAAACTGAAGCAGGACCAGGTAATTGAGAATTTGAAGTACACAATGAACTTTCTTCAGCAGTCC GGTGCGCGTGGCTTGGCCATGCCCTGCCATCTATCACACGCGTGGCACGGCGAAATTTCGGAGGATGGTTCCCTTCCATT TCTTCATGTTGGTGACTGTGTGGCCATGGAACTCAAGAAAGCTAAGCTGAAGCCAATTCATGCTACAAATACTGTGCGGA TTGGACTGCTTACTACAGATTCCCTTTTTGTAGGTAGTTATTACCAGGATAAGCTTCAAAGTCAGGGATTTGAAGTAGTG TTGCTAGACAAAGAAACTGAGGAACACACACTGGTTCCTGCAGTGGAGGCTTTGTCAAGAAAGGACATTGAAGGGGCAAG GAACTTACTGAGAATCGCGATCCATGTTCTTTTGGTCAGGGCAGTGAACGTGGTGATTCTGGCATCTGATGATCTGCTCG GTGTTCTCCCTCACAATGATCCTCTTCTCAGGAAATGCATAGACCCCATGGATGCTTTAGCCAGATCAACTATACATTGG GCAGAAACAACAGCAAAGAGCCTTAACCATAATGCGTCATTCACCAATAGCAAGAAAGCTGGAAAATATTGA 

Protein sequence (LotjaGi4g1v0268800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIEGGIVMSIQTPNHPLFLTGDAFKKRIQTQSRTRSSSGTVLQVSSALLTDENGSYPEPGTSFMRCKRPSCLLSQPNTVG VIGGVSVLSTLIFLEKLAYWGSRNGKECPPFVVCSDPMLSKVLSSRGPFPSARSRMAHIKLKQDQVIENLKYTMNFLQQS GARGLAMPCHLSHAWHGEISEDGSLPFLHVGDCVAMELKKAKLKPIHATNTVRIGLLTTDSLFVGSYYQDKLQSQGFEVV LLDKETEEHTLVPAVEALSRKDIEGARNLLRIAIHVLLVRAVNVVILASDDLLGVLPHNDPLLRKCIDPMDALARSTIHW AETTAKSLNHNASFTNSKKAGKY 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 326 326 1.0E-160
PANTHER 1 326 326 1.0E-160
Gene3D 78 315 238 3.2E-40
SUPERFAMILY 78 200 123 4.84E-15
Pfam 82 318 237 1.5E-29
Gene3D 192 309 118 3.2E-40
SUPERFAMILY 213 321 109 3.76E-12

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Molecular function Racemase and epimerase activity, acting on amino acids and derivatives Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.
Molecular function Racemase activity, acting on amino acids and derivatives Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0268800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…