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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0270200 |
| Transcript ID | LotjaGi4g1v0270200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleotide/sugar transporter family protein; TAIR: AT2G25520.1 Drug/metabolite transporter superfamily protein; Swiss-Prot: sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520; TrEMBL-Plants: tr|G7JCY0|G7JCY0_MEDTR Nucleotide/sugar transporter family protein; Found in the gene: LotjaGi4g1v0270200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:63577276..63580852) extracted from Lotus japonicus Gifu genome v1.2.
AGCCAATAAAATATGCCAAGTGGCACATTTTGATCAATAGATTACTTGTAATAACAGGGAAAAAATTAGTAAAGCCATGA TTACTCTATACTCAAAGTGAAATCGAAATCCTCCAAATACAAAATGCCACTATGAATGTGAATATTCCCTAATTCAATTC TCCTCTTCACTCTCCTCTCAGATTTGCAATTGAATGCAGATCACCTGAAATTTCGCCAGATCAGATCCCCTTTTCTTCCA CACCCCTCGATTCAAATTAGGGTTAGGGTTTCGTTCTTGTTGCAGAGCAAAAATGGCGGTCTCCGATGGCATGCTCAAGA AAATCATCCTCTCCTACACCTACGTCGCGATTTGGATCTTCCTCAGCTTCACCGTCATCGTATACAACAAGTACATCCTC GATCGCAAGATGTACAACTGGCCATACCCGATCTCGCTCACCATGATCCACATGGGGTTTTGCTCCTCCCTCGCTTACCT CCTCGTCCGCGTCTTCAAGCTCGTCGAGCCTGTTTCCATGTCGCGCGAGCTTTACCTCAAATCTGTGGTTCCGATCGGCG CGCTCTACTCGCTCTCCCTCTGGTTCTCGAATTCCGCTTACATCTACCTCTCGGTTTCGTTTATTCAGATGCTCAAGGCT CTCATGCCGGTGGCTGTTTACTCGATCGGGGTTTTGTTCAAGAAAGAGAGCTTCAGGAATGAAACCATGGCGAACATGGT TTCAATCTCTATGGGTGTTGCTGTTGCTGCGTATGGTGAGGCCAAGTTTGATGTGTTTGGTGTCAGCCTTCAGCTTCTGG CGGTTGCGTTTGAGGCTACTCGATTGGTCTTGATCCAGATTTTGCTCAATTCTAAGGGGATCTCGTTGAACCCCATTACC TCGCTTTACTACATTGCTCCTTGTTGTTTGGTGTTCTTGTCTGTTCCATGGCTTATTGTGGAGTACCCTTCATTGAGGGA TAATTCCAGCTTCCATTTGGATTTTGCCGTTTTCGGGACCAATTCGGTTTGCGCATTTGCTTTGAACCTTGCTGTGTTCT TGCTGGTTGGGAAGACGTCGGCGTTGACAATGAATGTTGCTGGGGTGGTTAAGGATTGGCTCTTGATTGCGTTCTCTTGG TCTGTGATAAAGGACACGGTTACGCCTGTGAATTTGATCGGTTACGGGCTGGCGTTTTTGGGGGTTTGTTACTATAATCA TTCGAAATTGCAGGCTCTCAAGGCTAACGAGGCGCAGAAGAAGGCTCAGCAGGCTGATGAAGAGGCTGGAAGGTTGTTGG AACAGAGAGATGGGGAAGGGACCGGAAGGAAGAACGAGAACCAGGGCTGATTCAACCGGGGGTCTCTGACTTTTTGCGAT ACAGAATTTGTTACTGTTCGATTCATGTTGGATCAGGCACGTTTTGTTTTTGGGTATGTGGTGGTGTACTCTACTGCTAT TAGTTTATTGTTGTTATGATGATGATGATGTTACTTCAGTGTTTTTGGTTCATAGTAGCTGTCATATGGGGTTGAGATTG ACATTTGTCTCTTATAATATTTCTCATTCAGTGATATGTGCTTATGATTAGATAGTGAATTATGCATTATGGATGTTCTG AAAGTTTATTATCGAGTAGCCAACTTGTTGGTTACCATGCCCATGTTTGCATTTATACTTGTAGCTGTTTCTGCATTTAG TTTCTGTTGGGGTGGGGATTGTTATATCATGCTGATAGCATTTGGTATGATTTAGCTTTTCCCCCCAAGAAAGGATGATG TCTAATGCTAGTTTATGTTTGTAATTTGGGATAATTCTTCTGTTTCAATTTCCACTCCCATCAAATGCATTTTCTTGTGG GACAAAATTCGTTTACTGATAGTGGAGAAATAAATTTAGGATGTTTCCTGAGCTACATCTCTAGTTTAGGTTCTATCTCT GTATGGTGATCACTCATTTCTTTTTAAACAACCATTTACATTTTCCCTTGTAAGATTGTCACTTTTCAAGTTTGGTCCCC CTTGGTTCAAAGAAGGGGAGGGATTTCCTTACCTACAAAATATAAATTTGGATTTAGAATGAGGAAGAATATTTTAGTCA TACAATTTTTCTCCCCTTCATAGGAGAGCCAAGATTGAGCGATGAGGGAGGTTTTGGCCCCTCTTCCTGCCCCTCAACTC CACTCTCCTTAAAGTTTCAACCAAATAAAACAAATTTTAAAAAATTTCTCTCCTCTCTTATGCTCTATTCCACCTCAAGT AAACACTATCTTAAAAAGGAGGGTGGAACAACTTGTTTCACAGTGGTTTGCTTGCTGTGTTTTCTGTACACTGTTTTTTG TGGATTTGCTTGGCTCATTCCAATTAGTGAACTTTTATGAGATTGGTGTTTAAGCATTATGCATGATTTTTGCTATCTTT GGACTGATCCCCCAAGTACTAGCCAGCAGTTACCTCTAATTCATTTCCTCACGCATATCTTGGCACCAATTTTGGTTGGT TGTGATTGCTGCTGTTTCACGCTTCCTTGTGTAGATCTCAATATGTTGCTTACTTCTTAGAGTGTATTTGTTACTTACGG TGCTTTGCAATTTGTTTGAAGGGGGGCACCTTCTTCGGTGTAACTTTTTGAGTTTCATTATCACCCTTTACTAAAAGTAA AGGAAAATGAGTTTCATCGTTATCTATCTACTAGTCAATGTTGATCTTTGCACTGTGTTTCTGGATCTTTACATGAATCT TCAATCACAACTAGTCTATAATAATTTGTATCTTTTGTTAGTTAGTGGAAAAGATTAAATTATTCAATTACAAATATTGG GTAGGATGTATTACTTACATTGCTTGCTCAAGTCTGGGTTTTTTATACAAGGGATTACCTTTTAAGATAGGAGAAATGAC ATGGTTTGTAGTTTGAACTTTGAAGCGGTCGTAATAAATTTTTTTTTTGTCAATGGTTTAGTTTAGAAGATCGATTTTGT TACATAATTAGTTGGGTCCTTAACCAAAAGCCAAAATCAATCCTCTAAAATGTCATAATCTCAGATTAAACGTTGGTTCT CCTGAATCAAAACCAGGTTCGTACCATCGTTTGCAACAGTACATCAGCCGTGCATCATCTGATATTCAACTAAAAAAACA TGTTTGACAAAAAAAACTAAAAAAACATGACTTTGCTCTCCTTCAAACACATGGGTTGGGTTTAAGAGGATCTTAAGTGG TGAAATACAGCACCATAGAAATTCCTTTGCTCTCCCATGTCCATTTGTGACTGTGAATTCGAGGGAGAAAGAGAAGAAGC AAGTGGAAGAAGAAGTGAGGAGGGAAATGAGTTTGAGTTGGGGGAGAGAAGGGAAAAAAAAAAAGAATGGGTTTGAAATT TAGACTTGAAATTTAGAGATTGCAGATCTGGGTTGTTTTTTTTTTATTATTTTTTTCTTTTATGATGATGATGGGTTGAA GATGATGTTGATAATGATGAAGAAGATACAGTGAATGAAGATGATATTGTTAATTAATTTAATAATCAGTGTTTTAGATT TTTTTAAATGAAAAAGAAAAAAATCTAAGTGGACTCATTAAATGACGTGGTAATGCC
CDS sequence (LotjaGi4g1v0270200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTCTCCGATGGCATGCTCAAGAAAATCATCCTCTCCTACACCTACGTCGCGATTTGGATCTTCCTCAGCTTCAC CGTCATCGTATACAACAAGTACATCCTCGATCGCAAGATGTACAACTGGCCATACCCGATCTCGCTCACCATGATCCACA TGGGGTTTTGCTCCTCCCTCGCTTACCTCCTCGTCCGCGTCTTCAAGCTCGTCGAGCCTGTTTCCATGTCGCGCGAGCTT TACCTCAAATCTGTGGTTCCGATCGGCGCGCTCTACTCGCTCTCCCTCTGGTTCTCGAATTCCGCTTACATCTACCTCTC GGTTTCGTTTATTCAGATGCTCAAGGCTCTCATGCCGGTGGCTGTTTACTCGATCGGGGTTTTGTTCAAGAAAGAGAGCT TCAGGAATGAAACCATGGCGAACATGGTTTCAATCTCTATGGGTGTTGCTGTTGCTGCGTATGGTGAGGCCAAGTTTGAT GTGTTTGGTGTCAGCCTTCAGCTTCTGGCGGTTGCGTTTGAGGCTACTCGATTGGTCTTGATCCAGATTTTGCTCAATTC TAAGGGGATCTCGTTGAACCCCATTACCTCGCTTTACTACATTGCTCCTTGTTGTTTGGTGTTCTTGTCTGTTCCATGGC TTATTGTGGAGTACCCTTCATTGAGGGATAATTCCAGCTTCCATTTGGATTTTGCCGTTTTCGGGACCAATTCGGTTTGC GCATTTGCTTTGAACCTTGCTGTGTTCTTGCTGGTTGGGAAGACGTCGGCGTTGACAATGAATGTTGCTGGGGTGGTTAA GGATTGGCTCTTGATTGCGTTCTCTTGGTCTGTGATAAAGGACACGGTTACGCCTGTGAATTTGATCGGTTACGGGCTGG CGTTTTTGGGGGTTTGTTACTATAATCATTCGAAATTGCAGGCTCTCAAGGCTAACGAGGCGCAGAAGAAGGCTCAGCAG GCTGATGAAGAGGCTGGAAGGTTGTTGGAACAGAGAGATGGGGAAGGGACCGGAAGGAAGAACGAGAACCAGGGCTGA
Protein sequence (LotjaGi4g1v0270200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVSDGMLKKIILSYTYVAIWIFLSFTVIVYNKYILDRKMYNWPYPISLTMIHMGFCSSLAYLLVRVFKLVEPVSMSREL YLKSVVPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKESFRNETMANMVSISMGVAVAAYGEAKFD VFGVSLQLLAVAFEATRLVLIQILLNSKGISLNPITSLYYIAPCCLVFLSVPWLIVEYPSLRDNSSFHLDFAVFGTNSVC AFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPVNLIGYGLAFLGVCYYNHSKLQALKANEAQKKAQQ ADEEAGRLLEQRDGEGTGRKNENQG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 3 | 334 | 332 | 1.3E-210 | – | |
| PANTHER | 3 | 334 | 332 | 1.3E-210 | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| Pfam | 16 | 302 | 287 | 1.6E-25 | ||
| Phobius | 32 | 42 | 11 | - | – | |
| Phobius | 43 | 68 | 26 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| SUPERFAMILY | 62 | 156 | 95 | 1.09E-5 | – | |
| Phobius | 69 | 79 | 11 | - | – | |
| TMHMM | 80 | 99 | 20 | - | – | |
| Phobius | 80 | 98 | 19 | - | – | |
| Phobius | 99 | 103 | 5 | - | – | |
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 104 | 126 | 23 | - | – | |
| Phobius | 127 | 137 | 11 | - | – | |
| Phobius | 138 | 155 | 18 | - | – | |
| TMHMM | 138 | 155 | 18 | - | – | |
| Phobius | 156 | 160 | 5 | - | – | |
| TMHMM | 159 | 181 | 23 | - | – | |
| Phobius | 161 | 185 | 25 | - | – | |
| Phobius | 186 | 196 | 11 | - | – | |
| TMHMM | 194 | 216 | 23 | - | – | |
| Phobius | 197 | 216 | 20 | - | – | |
| Phobius | 217 | 230 | 14 | - | – | |
| TMHMM | 231 | 253 | 23 | - | – | |
| Phobius | 231 | 251 | 21 | - | – | |
| Phobius | 252 | 257 | 6 | - | – | |
| Phobius | 258 | 279 | 22 | - | – | |
| Phobius | 280 | 284 | 5 | - | – | |
| Phobius | 285 | 302 | 18 | - | – | |
| Phobius | 303 | 345 | 43 | - | – | |
| Coils | 311 | 331 | 21 | - | – | |
| MobiDBLite | 317 | 345 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0270200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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