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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0274200 |
| Transcript ID | LotjaGi4g1v0274200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase; TAIR: AT2G13290.1 beta-1,4-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q02527|MGAT3_RAT Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase; TrEMBL-Plants: tr|G7JE73|G7JE73_MEDTR Beta-1,4-N-acetylglucosaminyltransferase-like protein; Found in the gene: LotjaGi4g1v0274200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:64373471..64374583) extracted from Lotus japonicus Gifu genome v1.2.
AATTTAAAATTCTCCTCTGAAGACATGGCTACCCGAATAGGCTTCACTTCTAAACGAAAAGTTCCTAAGCTCCTTTGTAT CTTACTTCTATTACTGTTGCTATTTTGTGTGATTGGAATTTTTAACCATGGCCAAAAGATTTCATATTTCTTCCGACCCC TTTGGGACAATCCCCCTCCCCCCTTCACACGGATACCACACTATTATGCAGAAAATGTCTCTATGGACCACCTTTGCCAT CTTCATGGCTGGTCCCTTCGCTCCGAACCTCGCCAAATTTTCGATACTATTATTTTCAGTAATGAGTTAGACCTGCTAGA GATTAGATGGCATGAACTTTACCCTTATGTGTCAAAATTTGTGATCCTTGAGTCTAATACCACCTTCACAGGCATTCCAA AACCTCTCTTCTTTGCCTTAAACCAGGAAAGATTTGCCTTTGCCGAACAAAAGATTGTCCATGACTTTTATCCTGGCAAA GTTGCAGTCCCTGGATCACGCGGGGACCCATTTGTGCTCGAGACAAACCAACGTGTAGCCATGAATTCATTGCTGAAACG TGCAGGGATTTCGAATGGTGATATCCTTCTCATGTCAGACATAGATGAGATTCCAAGCCCTCATACTTTGAAACTGCTTC AGTGGTGTGATGGGATTCCTCCCATAATGCACCTTGAACTGAGGCACTACATGTACTCATTTGAGTTCCCTGTGGACTAC AGCAGCTGGCGAGCCACTTCCCACGTCTACGGTCCCCGGACGCATTACCGGCATTCACGCCAAACTGATGAACTCTTCTC AGATGCAGGATGGCACTGCAGCTTCTGCTTTCGGTATATCTCAGAGTTTGTGTTCAAAATGACTGCATATAGCCACGCAG ACCGTGTGAAAAGGAAATCTTTTCTGAGTCATTCAAGAATTCAGAAACTTATTTGCAATGGAGATGATCTTTTTGATATG CTTCCTGAAGAATTCTCCTTCCATGAGTTGATTAAGAAGATGGGGTCAATACCCCGGTCAGCTTCCGCGGTTCATCTTCC TGCTTACTTGATAGAGAATGCAGATAAATTCAAGTTTCTTCTCCCTGGAGGTTGCTTGAGACCACCAGAATAA
CDS sequence (LotjaGi4g1v0274200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACCCGAATAGGCTTCACTTCTAAACGAAAAGTTCCTAAGCTCCTTTGTATCTTACTTCTATTACTGTTGCTATT TTGTGTGATTGGAATTTTTAACCATGGCCAAAAGATTTCATATTTCTTCCGACCCCTTTGGGACAATCCCCCTCCCCCCT TCACACGGATACCACACTATTATGCAGAAAATGTCTCTATGGACCACCTTTGCCATCTTCATGGCTGGTCCCTTCGCTCC GAACCTCGCCAAATTTTCGATACTATTATTTTCAGTAATGAGTTAGACCTGCTAGAGATTAGATGGCATGAACTTTACCC TTATGTGTCAAAATTTGTGATCCTTGAGTCTAATACCACCTTCACAGGCATTCCAAAACCTCTCTTCTTTGCCTTAAACC AGGAAAGATTTGCCTTTGCCGAACAAAAGATTGTCCATGACTTTTATCCTGGCAAAGTTGCAGTCCCTGGATCACGCGGG GACCCATTTGTGCTCGAGACAAACCAACGTGTAGCCATGAATTCATTGCTGAAACGTGCAGGGATTTCGAATGGTGATAT CCTTCTCATGTCAGACATAGATGAGATTCCAAGCCCTCATACTTTGAAACTGCTTCAGTGGTGTGATGGGATTCCTCCCA TAATGCACCTTGAACTGAGGCACTACATGTACTCATTTGAGTTCCCTGTGGACTACAGCAGCTGGCGAGCCACTTCCCAC GTCTACGGTCCCCGGACGCATTACCGGCATTCACGCCAAACTGATGAACTCTTCTCAGATGCAGGATGGCACTGCAGCTT CTGCTTTCGGTATATCTCAGAGTTTGTGTTCAAAATGACTGCATATAGCCACGCAGACCGTGTGAAAAGGAAATCTTTTC TGAGTCATTCAAGAATTCAGAAACTTATTTGCAATGGAGATGATCTTTTTGATATGCTTCCTGAAGAATTCTCCTTCCAT GAGTTGATTAAGAAGATGGGGTCAATACCCCGGTCAGCTTCCGCGGTTCATCTTCCTGCTTACTTGATAGAGAATGCAGA TAAATTCAAGTTTCTTCTCCCTGGAGGTTGCTTGAGACCACCAGAATAA
Protein sequence (LotjaGi4g1v0274200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATRIGFTSKRKVPKLLCILLLLLLLFCVIGIFNHGQKISYFFRPLWDNPPPPFTRIPHYYAENVSMDHLCHLHGWSLRS EPRQIFDTIIFSNELDLLEIRWHELYPYVSKFVILESNTTFTGIPKPLFFALNQERFAFAEQKIVHDFYPGKVAVPGSRG DPFVLETNQRVAMNSLLKRAGISNGDILLMSDIDEIPSPHTLKLLQWCDGIPPIMHLELRHYMYSFEFPVDYSSWRATSH VYGPRTHYRHSRQTDELFSDAGWHCSFCFRYISEFVFKMTAYSHADRVKRKSFLSHSRIQKLICNGDDLFDMLPEEFSFH ELIKKMGSIPRSASAVHLPAYLIENADKFKFLLPGGCLRPPE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Pfam | 15 | 359 | 345 | 8.3E-173 | ||
| PANTHER | 16 | 360 | 345 | 6.5E-162 | – | |
| Phobius | 16 | 27 | 12 | - | – | |
| PANTHER | 16 | 360 | 345 | 6.5E-162 | ||
| Phobius | 28 | 31 | 4 | - | – | |
| Phobius | 32 | 362 | 331 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R. | ||
| Biological process | Protein N-linked glycosylation | A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi4g1v0274200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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