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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0280200 |
| Transcript ID | LotjaGi4g1v0280200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenylate cyclase; TAIR: AT2G11890.1 adenylate cyclase; Swiss-Prot: sp|Q9SIY3|TTM3_ARATH Triphosphate tunel metalloenzyme 3; TrEMBL-Plants: tr|I3T9A3|I3T9A3_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0280200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65123179..65126356) extracted from Lotus japonicus Gifu genome v1.2.
CGATCATCTATTTTTTTGTTTATTCAAGCAAAAAAAAAGGGCTTTTTATTTGGGTGAGGGATCATATCATAGGAAGCTGA TTTCTGTGGCCACAGTCGCAAGATGCTGAGAAGAAAACCTGCGAAAATCGAAGTCAAGATCGAAGACAAAGAAGAAATCG AGGAACATCGCCGCCGTAACGCCACCGCCAACGCCGCCGCAGCAACCACCACTGGCGCCGCCACTCTCATTCGTCAGTTC GATCGCGCCGAGGATCCCTCTTCCAAAGCGCATCGCATTGGCCTCTCCTCTCCATAAACCCTTCTCCGTCCGCTCCCTTT CTCTCTCCCCTTCCGATATGGAGGTCGAGGTCAAGCTCCGCCTCCCCAACGCCGAAGCTCACCGCCAAGTCACCACCCTG CTCGCCCCCTTCCACGTCACCACCCACCGCCAGCATAATCTCTTCTTCGACGGCGCCGCCGCCGAGCTCTCCTCAAAGCG CGCCGTTCTCCGGCTCCGATTCTACAACGACGACTCGCGCTGTGTCGTTTCGCTCAAGGCTAAGGCGGTTCTGGTCGACG GCGTGAGCCGCGTGGAGGAGGATGAGGAGGATCTGGACCCGAAGGTCGGTCGCGATTGTGTGGCGGAGCCGGGGAAGTTG GGGTCGGTGGAGTCTAGGATTTTGGGGAGGGTGAAGGAGGAGTTTGGGGTTGCGGGTGAAAATGGGTTCGTGGGTTTGGG GGGTTTTCGGAACGTGAGGAATGTGTATGAATGGAAGGATTTGAAGTTGGAAGTGGATGAAACCATGTTTGATTTTGGAA CCTTGTATGAGATTGAGTGTGAGAGTGCTGATCCTGAAGAAGCTAAGCGTCTCCTTGAGGATCTCTTGAAGGAGAATGGA ATTGATTATTCATACTCTGTGGCGTCCAAGTTTGCAATTTTTCGATCTGGGAAACTGCCACAGTGATTGATGTTTCAATC TTTCTGAATTGTAATAGTTTTCTGTTCAAATTTCTTGTTTTCGTTTTTATGTATTTGTCTTATGATCTTGTTTAAAATTT ATGTCTAAGTTCTAAATGATTATTGGTCTTTTACATTCTGTATTAAGATCATTTTTTTCCTAGGATGTTGTCTCGTTTGT GATTCATGTGTTCATCTATCACACATATGCAGGTTTATACCATTACTGCTAGAGTGCTAGGTTCATCAGCTTCATACCCT TTTTTATCTCAATATTTATATTACTAAACTTACTTGCCCATTGGGCCTATGGTTTTGGTGTTACTGCTATTTCATAATTG CCTATATACCAGATTTTCATAAGAATGTTACTTCAATTGTAAAGGAGACATGAAGTTGATCCATGAGTTATTGTTGTAAG TTTTCTGAGCATTTACAGAGCATATGAGCCCTGAATGTTGCTTATGGTTTTGACTTTTGATTGATACAATGTTTATGTCA TCTTATAGTAAAGAGAAGACTTCCTCCCTACATGACATTCCCTATTTTCTACTGCTACTGTGTCATCTCTAGACTCTAAT AAAGTTTTTTAATATATGGTGATATATCTATTGCATGCATGTTCAGAATGTATGGGCAACTGCAGCTTATTCAGCTCCTT CTATTGTTTTAACATTGTATTCTTTTGAAAGGCTGTGTTTGTATCCATTATAGATTAAAATGAAAGTCTGCTGATGTTGT ACTCAACTCAATTCTGATATTCAAACGATTTTTTACAGGCTTATAAGTGATTGATAATGTTCAGGAGTATATGAAAAAGT CACTCGTGGCTGTTCTTAGTTTTGTGCTCAAACGTATAAGTGTGCTTATGAAGTAGTAATTTCTATCTGTGTTTCAAACA TTTTGGATTGAACTATGTTTGCCTTTTCTGTTACAAAGTTCAATATTTAGGCTGATTATTGATATTCTTTCGGTTAAAGA TTGTCTAGAATAAACTTTGATGGTTAGGTTTCCCATTTCATTGATTTCCTTATTTTTTGGTACATCAAAAGTTAGGGTAA AGGGATTGTTGCTCCAATTCAAAGTAGGAAAATGTTCAGACTCAAAGAGCACTTAACAAAGTCTAATTGTTAAAACCATG GTCAAACTAACTCAATTAGGGTTAAAACATCAATGCCACCAGAATGATAGACTAGCAAATGGTTCTCACATTTAATTACA CGATTAATATGTATGGTACTATGACCCTGTTTGGAAGAGCTTATTTGAACTTATCTGATAGCACAAGCTCTTATGTCAGT GTTTGGGAGAGCTTATGCAAATAGCTCATGACCTACCATAAGCTGTTTTGAGCTTATTTTCATAAACTAATCATGATAGC TTATGAAAAAGAGTTTATGCTTATATATAGCTTATTTTTCAATTTATTTCAATAAATATTTTAAAATAATTTATGAATAA GCGCTTATGGTATGACCATAAGCGCTTAATTAAGCTGTGTTTCCAAACGGGACCTATAAGAAATTACACATGTTTGATAG TACTATAAGAAATTCAGACAACTCATTGGTTATCTTATTGCTTATTTTGGACTTTGTGTTTCTCTCTTTGATATTGAACT AACTTGAGCGTTAAAGTGTCTTTTGCATGTACCTCATCCACAATACCCATTATGAGCTTTGTCGCGACATCTGCTTGCTC ACTACCATACACCATCAAGCTTGATAAGAAGTTCATCTTGCTCAAGATTTAGGAAGATCAATTGACGCCTTTTGTAGGAA TTCCAGGAAGGTCATGGACACTAGCGAACGTATCCAACTAAAGGATACGATCAAGCAAATGATTCGAGATGGAAAGCTGA AAAAATATATGAAGAAGGCTCATGATGATGGAGGAAGTCATTTTTTCAAAAGCAACAAAAGAAGTTTTCATAACTTTCAC GATGATATTGTTGGATTTTACAAAAGCAACAAAAAAAGATCTCATAACTTTCACGATGATATTGTAGGATTAGAGCATTC ACGATGGAAGTTGTTTATCTTTTTTTTGGTTACATGTTTATTTGACAATGTTTTTTTCTGGACCTAAAATATCACATAAG ATTTAAGCTACTATGAACAACTTTTGTAATTTTTACTCCAATAGAAGTTTCATATATTTTTGTTGTTGGATCACACAATA GATTCCACATATTATTGTATTTTTATGTGTAATTCATTTTGGGTTGTATGTTCAACGG
CDS sequence (LotjaGi4g1v0280200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTCGAGGTCAAGCTCCGCCTCCCCAACGCCGAAGCTCACCGCCAAGTCACCACCCTGCTCGCCCCCTTCCACGT CACCACCCACCGCCAGCATAATCTCTTCTTCGACGGCGCCGCCGCCGAGCTCTCCTCAAAGCGCGCCGTTCTCCGGCTCC GATTCTACAACGACGACTCGCGCTGTGTCGTTTCGCTCAAGGCTAAGGCGGTTCTGGTCGACGGCGTGAGCCGCGTGGAG GAGGATGAGGAGGATCTGGACCCGAAGGTCGGTCGCGATTGTGTGGCGGAGCCGGGGAAGTTGGGGTCGGTGGAGTCTAG GATTTTGGGGAGGGTGAAGGAGGAGTTTGGGGTTGCGGGTGAAAATGGGTTCGTGGGTTTGGGGGGTTTTCGGAACGTGA GGAATGTGTATGAATGGAAGGATTTGAAGTTGGAAGTGGATGAAACCATGTTTGATTTTGGAACCTTGTATGAGATTGAG TGTGAGAGTGCTGATCCTGAAGAAGCTAAGCGTCTCCTTGAGGATCTCTTGAAGGAGAATGGAATTGATTATTCATACTC TGTGGCGTCCAAGTTTGCAATTTTTCGATCTGGGAAACTGCCACAGTGA
Protein sequence (LotjaGi4g1v0280200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVEVKLRLPNAEAHRQVTTLLAPFHVTTHRQHNLFFDGAAAELSSKRAVLRLRFYNDDSRCVVSLKAKAVLVDGVSRVE EDEEDLDPKVGRDCVAEPGKLGSVESRILGRVKEEFGVAGENGFVGLGGFRNVRNVYEWKDLKLEVDETMFDFGTLYEIE CESADPEEAKRLLEDLLKENGIDYSYSVASKFAIFRSGKLPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 202 | 202 | 1.7E-95 | – | |
| Gene3D | 1 | 201 | 201 | 1.5E-63 | – | |
| SMART | 1 | 199 | 199 | 3.1E-6 | ||
| ProSiteProfiles | 1 | 199 | 199 | 15.987 | ||
| PANTHER | 1 | 202 | 202 | 1.7E-95 | ||
| SUPERFAMILY | 1 | 188 | 188 | 1.21E-26 | ||
| CDD | 2 | 179 | 178 | 2.95168E-22 | – | |
| Pfam | 2 | 181 | 180 | 5.3E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Root development | The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo. | ||
| Molecular function | Triphosphatase activity | Catalysis of the reaction: H(2)O + triphosphate = diphosphate + phosphate. |
Expression pattern of LotjaGi4g1v0280200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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