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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033469
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.881s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1196760.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356499984|ref|XP_003518815.1| chr2 19079378 19091179 -
2 domain predictions
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Lj2g3v1196760.2
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356499984|ref|XP_003518815.1| chr2 19079378 19091179 -
2 domain predictions
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Lj4g3v1748290.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356511573|ref|XP_003524499.1| chr4 25006409 25013607 +
2 domain predictions
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Lj4g3v1748290.2
n.a. Uridine-cytidine kinase C [Medicago truncatula] gi|357477775|ref|XP_003609173.1| chr4 25008787 25013607 +
2 domain predictions
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Lj4g3v1947690.1
n.a. adenylate cyclase [Ipomoea nil] gi|306035016|gb|ADM83596.1| chr4 27253819 27256412 +
2 domain predictions
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LotjaGi2g1v0286900.1
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0286900 LjG1.1_chr2 75978382 75988303 -
2 domain predictions
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LotjaGi2g1v0286900.2
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0286900 LjG1.1_chr2 75978672 75987934 -
2 domain predictions
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LotjaGi2g1v0286900.3
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0286900 LjG1.1_chr2 75979099 75986676 -
2 domain predictions
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LotjaGi4g1v0080700.1
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|I1KM57|I1KM57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515202 10539267 +
2 domain predictions
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LotjaGi4g1v0080700.2
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|I1KM57|I1KM57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515230 10538600 +
2 domain predictions
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LotjaGi4g1v0080700.3
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|I1KM57|I1KM57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515499 10538082 +
2 domain predictions
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LotjaGi4g1v0080700.4
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|A0A0B2PKG2|A0A0B2PKG2_GLYSO Uridine-cytidine kinase C; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515499 10538082 +
2 domain predictions
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LotjaGi4g1v0153200.1
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0153200 LjG1.1_chr4 25444758 25455761 -
2 domain predictions
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LotjaGi4g1v0259100.1
n.a. Uridine kinase; TAIR: AT1G73980.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|A0A0R0JPT3|A0A0R0JPT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0259100 LjG1.1_chr4 61458723 61466678 +
2 domain predictions
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LotjaGi4g1v0259100.2
n.a. Uridine kinase; TAIR: AT1G73980.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|A0A0R0JPT3|A0A0R0JPT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0259100 LjG1.1_chr4 61459762 61465967 +
2 domain predictions
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LotjaGi4g1v0280200.1
n.a. Adenylate cyclase; TAIR: AT2G11890.1 adenylate cyclase; Swiss-Prot: sp|Q9SIY3|TTM3_ARATH Triphosphate tunel metalloenzyme 3; TrEMBL-Plants: tr|I3T9A3|I3T9A3_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0280200 LjG1.1_chr4 65123179 65126356 +
2 domain predictions
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