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LotjaGi4g1v0286700.5

Overview

Field Value
Gene ID LotjaGi4g1v0286700
Transcript ID LotjaGi4g1v0286700.5
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|I3SVI9|I3SVI9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0286700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:65885327..65889172) extracted from Lotus japonicus Gifu genome v1.2.

GAATTTGAAGTCATTTATCTCAGTTAATTCTATAATTTTGCATGTTAGTGGAAGATTGATAAATCTAACATTTGCTAGAC TTTTCTTGTCTTCAATATTTGATGAAATCCCAGTTAGCTAACTAAAGAGGCTTAGAATTGCATATAACATGTGATATCTA GTTTCATGCAGCCAAATTAGAATAACAGACCTGAAAGTTCTCCTTTTTTTACAGTTAGTAGGAAATTATTGTGTCTAATT TGCTATAAAAATGATGTACATGCAGCATGTTCACAAGAGGAGGTTAATAAGGTCATGGATTCAGCAAAATCTGCACAGAA GTCATGGGCCAAGACCCCGCTCTGGAAGCGGGCTGAGCTTCTTCACAAGGCTGCTGCAATCCTCAAAGAGCACAAAGATC CAATTGCAGAGTGCTTGGTGAAAGAAATAGCAAAGCCAGCCAAAGATGCAGTTACAGAGGTGCATATTGTGTTGTTGTAA AATAAACCAAGGTGTTGTTCAGGACTATAATGTTAATTCATGAAATAATTGGTTTTTATTTTTACTTTTTGCATGTAGGT TGTAAGATCTGGAGATTTGATTTCTTACACTGCTGAAGAAGGGGTAAGGATTCTGGGAGAGGGAAAGTTCTTGGTGTCGG ATAGCTTTCCTGGAAATGAAAGGACGAAATATTGTCTCACATCCAAGGTCTATTTTCAGCACTTCTTTACTGCCACTTCA GAAGTTACAGTTCATATGATACTGGCGGATTTGGATTCCGTGCTGTCAGGGAATCTGACATTCACCATTCAAGCAGTTTG AGTCACCTGATCTTAGTTCAAAGGGTTCGCATTTTGAGTTACTATTACAAATTACTTATTACAACTCAAAATCTGAATTA TCAGATCTTTGATCGGATCGGACGGCTTGAATGCAGGATTTCCCTGACTGCACATCGCCACAAATCTTCCCCTCCGTCCC TTGTTGTCGGCAATTTGAGTGTTAATTCTAAGTAAATAATGAAGGGAATGTGAACTTGAAGAAAAAACTGCAATTTTTTA TTTGTTAACAACCACACATCTACATATTAAAGAAAAACTGAAGATCCTGAGCTCCTTTTTTTGTTAAGTAAGTTGGCATT CTGATTAAAACTTGGAAGGATGATTGGTTCATATTACCTTGATTTATCTAACAAACACCCCTTTAATTGACAAATCTGAG TTCTGCCAAAATTTTCTGGCTGTGTGTAGCTTTACTCTTGCAAATTCATATTGGTATGAACTTTTTCTTTATGTTCCTTA AATTCATAATTTAGAATCTCTATGATCGAAGTTTTGTCGCTGTACCATGTGCTGTGATCTGTTCAATAACTAGGAAACTG ATTGATGATGTGGTCTAAGAAAGTTCTAATTGATTTTCAGATTCCATTGGGTGTAGTTTTAGCCATTCCACCTTTTAACT ATCCTGTCAATCTCGCTGTCTCTAAAATCGGTCCTGCGCTGATTGCTGGAAATTCCATTGTTCTCAAGCCTCCAACTCAG GTAATTTTATCCTTCAATTGAAAATTTTCAGAGGCATTATATGTCATATGCACACTTTCACAGGTCGCTACTCTCTTCTC GCAAAAAGTGCTAGCTAGTGTCTAGTGATTTGAAGAAACCACAACAATTAGTTAATTTCAGAATCTTTTAAGTCTTTTAA TTAGTCCCCTTCTTTTCTTCATTGCTCTTTCTAAATGTTAGCTGTTTCTGCTCTAATGATGAATTTCAGGGAGCTGTTTC TGCTCTGCATATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATCAGCTGTGTTACTGGTAAAGGCTCAG AAATTGGTGACTTTCTTACTATGCATCCTGGAGTGAACTGTATAAGGTGACCATTTATTCTGTTTTTCTATGACTCCATG ATAGTAAAGCACCTCATGTCCTCAATTTTCCATGTGTAACCAATTTTTATCTTTCCTCTACTGACTTATAACTGCTGTTT GTCAGCTTCACCGGTGGAGATACCGGCGTCGCAATTTCAAAAAAGGCAGGCATGATCCCCCTGCAAATGGAGTTGGGAGG AAAAGATGCATGCATTGTTCTTGAGGATGCTGACCTGGATTTGGTTGCTGCTAACATTATAAAGGGTGGTTTTTCATACA GGTGAGCGGCATATCTGAAACTTCTTGATATATTTAGTATGCGTCATTGTTTACAATCTATGTCTACCGAACTACCTCTC ATGGTAGCCCGGCCTAAGGAAAGATTCATATGGTGGTCTCCAATAAACTTATAAACATGAAGCCCGGTCTAAAAGGGTGC ACATGACTCATGCACGAACCCAAGGGGCTCACAACCCCCAAATTAAGTACTTGTCCGATCGAAACCCCACATTCATTAAG CCAATCATTATGCCATTCATGAAACAGCTGACAGATAAAGTGGCAATCTTGAACATATTAAAAGCTTAAGATAACAAAGA TTTGATCATCTTCACTCTAATGCTTATCCCGAGGGCTAGGCTGTGTGCTGGTCACTGAGTTTGACCACCAGAGTTTGGAG AGAACACAACCTTACTGTGAAATAAGAAGAGTTTGTAAGATATTGCTGCTAACATCAGAGAATTTTCCAATATATAAGTT GAAACATTTCTTTGCGTAATGGCAACTTACTTGAATTGCTGTTTGTTTTTTCAATAATAGTGGTCAGAGATGCACTGCTG TTAAGGTTGTCCTGGTAATGGAATCTGTTGCTGATGCTTTGGTTGAGAAAGTGAAGGCCAAGGTGGCAAAACTAACTGTT GGACCCCCAGAGAATAACTGTGATATCACCCCAGTTGTGACTGAATCATCAGCCAACTTCATCGAAGGCCTGGTCAATGA TGCAAAAGAGAAAGGAGCAACATTCTGCCAGGAATACAAAAGAGAAGGAAATCTTATTTGGCCTTTGCTGCTGGATAATG TTAGGCCAGACATGAGAATTGCATGGGAAGAGCCATTTGGACCTGTTTTGCCAGTGATTAGGATCAACTCTGTTGAAGAA GGGATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGTAAAAGTTTAGTTTGTTTGGATCAACGTTGGCGGAATTGA TTTTGGTAAAACTAACTATGGTAAAAGTGAGTTGAATGTAAAGTGACTTCAATAGGATACTGTTGAGAAATCCAGTTATG AAATCTCATAATTGATTATGTCCACTGGAGAAGCTACTCTCTCTAGCTTCTCCACAAAATTGATTTTGAGGCTAAAATCA ATTCTCTAAGTCGATTTCCAAACATCTATAAAATCACGTAGAAGTGATTGTGGTCACTGAGAATTAATTGTAAGGCTCCC AAACGTGAAATCAAACACTCACTTAGCCAATTACCCTTGAGAGAGTACTATAATGCCTTCTTATAATAGATTGGTCATTG GTGAGCATGCTAGTAATTTGTATCAACACATTGAACTCGTGCAGGGATGTGTGTTCACAAAGGATATCAACAAAGCAATG ATGATCAGTGATGCAATGGAAACAGGAACAGTTCAGATAAATTCTGCCCCGGCTCGCGGGCCAGATCATTTTCCCTTTCA GGTGAATCCACCATAAAACCAATCTAGTTCTGTTATTTCATTTCCCAAACTTGAAAAAGAACCAAAAGCATTTCTATATC AGAAGGCAATAACTTGTGTCCAATATTAACAAATGTTTTTTATTGCTTACAGGGTATAAAGGACAGTGGGATTGGATCCC AAGGGATTACAAACAGCATAAACATGATGACGAAGGTCAAAACTACTGTGATCAACTTACCTAGCCCTTCTTATTCCATG GGTTAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0286700.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATTCAGCAAAATCTGCACAGAAGTCATGGGCCAAGACCCCGCTCTGGAAGCGGGCTGAGCTTCTTCACAAGGCTGC TGCAATCCTCAAAGAGCACAAAGATCCAATTGCAGAGTGCTTGGTGAAAGAAATAGCAAAGCCAGCCAAAGATGCAGTTA CAGAGGTTGTAAGATCTGGAGATTTGATTTCTTACACTGCTGAAGAAGGGGTAAGGATTCTGGGAGAGGGAAAGTTCTTG GTGTCGGATAGCTTTCCTGGAAATGAAAGGACGAAATATTGTCTCACATCCAAGATTCCATTGGGTGTAGTTTTAGCCAT TCCACCTTTTAACTATCCTGTCAATCTCGCTGTCTCTAAAATCGGTCCTGCGCTGATTGCTGGAAATTCCATTGTTCTCA AGCCTCCAACTCAGGGAGCTGTTTCTGCTCTGCATATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATC AGCTGTGTTACTGGTAAAGGCTCAGAAATTGGTGACTTTCTTACTATGCATCCTGGAGTGAACTGTATAAGCTTCACCGG TGGAGATACCGGCGTCGCAATTTCAAAAAAGGCAGGCATGATCCCCCTGCAAATGGAGTTGGGAGGAAAAGATGCATGCA TTGTTCTTGAGGATGCTGACCTGGATTTGGTTGCTGCTAACATTATAAAGGGTGGTTTTTCATACAGTGGTCAGAGATGC ACTGCTGTTAAGGTTGTCCTGGTAATGGAATCTGTTGCTGATGCTTTGGTTGAGAAAGTGAAGGCCAAGGTGGCAAAACT AACTGTTGGACCCCCAGAGAATAACTGTGATATCACCCCAGTTGTGACTGAATCATCAGCCAACTTCATCGAAGGCCTGG TCAATGATGCAAAAGAGAAAGGAGCAACATTCTGCCAGGAATACAAAAGAGAAGGAAATCTTATTTGGCCTTTGCTGCTG GATAATGTTAGGCCAGACATGAGAATTGCATGGGAAGAGCCATTTGGACCTGTTTTGCCAGTGATTAGGATCAACTCTGT TGAAGAAGGGATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTGTTCACAAAGGATATCAACAAAGCAA TGATGATCAGTGATGCAATGGAAACAGGAACAGTTCAGATAAATTCTGCCCCGGCTCGCGGGCCAGATCATTTTCCCTTT CAGGGTATAAAGGACAGTGGGATTGGATCCCAAGGGATTACAAACAGCATAAACATGATGACGAAGGTCAAAACTACTGT GATCAACTTACCTAGCCCTTCTTATTCCATGGGTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0286700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKDPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFL VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIGPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLI SCVTGKGSEIGDFLTMHPGVNCISFTGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRC TAVKVVLVMESVADALVEKVKAKVAKLTVGPPENNCDITPVVTESSANFIEGLVNDAKEKGATFCQEYKREGNLIWPLLL DNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMMISDAMETGTVQINSAPARGPDHFPF QGIKDSGIGSQGITNSINMMTKVKTTVINLPSPSYSMG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR42991
1 438 438 2.9E-299 –
CDD
cd07082
1 429 429 0.0 –
PANTHER
PTHR42991:SF5
1 438 438 2.9E-299 –
Pfam
PF00171
2 425 424 1.2E-138
IPR015590
SUPERFAMILY
SSF53720
2 429 428 1.7E-124
IPR016161
Gene3D
G3DSA:3.40.605.10
2 207 206 8.7E-133
IPR016162
ProSitePatterns
PS00687
205 212 8 -
IPR029510
Gene3D
G3DSA:3.40.309.10
210 393 184 8.7E-133
IPR016163
ProSitePatterns
PS00070
233 244 12 -
IPR016160

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0286700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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