Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0289500 |
| Transcript ID | LotjaGi4g1v0289500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT5G02500.2 heat shock cognate protein 70-1; Swiss-Prot: sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein; TrEMBL-Plants: tr|A0A0E0HFK2|A0A0E0HFK2_ORYNI Uncharacterized protein; Found in the gene: LotjaGi4g1v0289500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66196650..66198602) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGACAAAAGAAGGCAAAGCAATCGGCATAGACCTCGGCACAACCTACAGCTGCGTCGGCGTCTGGCAAAACGACCG CGTCGAGATCATCCCCAACGACCAAGGCAACCGCACAACCCCATCCTACGTCGCCTTCACCGACACCGAGCGACTCATCG GCGACGCCGCGAAGAATCAAGTAGCCATGAACCCACAGAACACCGTCTTCGACGCGAAGCGTCTCATCGGCCGCAGATTC TCCGACCCATCTGTCCAAAACGACATGAAGCTCTGGCCATTCAAGGTCGTTTCAGGCCCCGCTGAAAAGCCCATGATCGT CGTCAACTATAAAGGCGAGGAGAAAACGTTCGCAGCTGAAGAAATCTCCTCCATGGTGTTAGTGAAAATGCGTGAGGTAG CAGAAGCGTTTCTGGGTCATGCTGTGAAGAACGCTGTTGTTACTGTTCCTGCTTACTTCAACGATTCTCAGAGACAAGCT ACAAAAGATGCAGGGGCGATTTCAGGGTTGAATGTTCTGCGAATCATCAATGAACCCACTGCTGCTGCGATTGCGTATGG TTTGGACAAGAAAGCTTCGAGGAAAGGTGAGCAGAATGTGCTGATTTTTGATCTGGGTGGTGGAACTTTTGATGTGTCTC TGTTGACGATTGAGGAGGGGATTTTCGAGGTGAAGGCCACTGCAGGGGATACTCATCTCGGTGGTGAAGATTTTGATAAC AGGATGGTGAATCATTTTGTGTCTGAGTTCAAGAGGAAGAACAAGAAGGATATCAGTGGAAATGCCAGAGCGTTGAGGAG GTTGAGGACTGCATGTGAGAGAGCGAAGAGGACTCTGTCTTCCACTGCACAGACAACGATTGAGATTGATTCGTTGTATG AAGGGATTGATTTCTATGCGACAATTACCAGGGCGAGATTTGAGGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAG CCGGTGGAGAAGTGTCTAAGGGATGCGAAGGTTGATAAGAGCAGTGTTCATGAGGTTGTTCTGGTTGGTGGGTCGACCAG GATTCCGAAGGTTCAGCAGCTTTTGCAGGATTTCTTCAATGGGAAGGAGCTTTGCAAGAGTATTAACCCCGATGAAGCTG TGGCCTACGGTGCGGCGGTGCAGGCGGCGATTTTGAGCGGTGAAGGGGATGAGAAGGTGCAGGATTTGTTGTTGCTTGAT GTGACTCCTCTGAGTCTTGGGTTGGAAACTGCTGGTGGGGTGATGACAGTTCTAATTCCGAGGAACACGACGATTCCGAC GAAGAAGGAACAGATTTTCTCTACCTACTCTGATAATCAACCAGGGGTTTTGATTCAGGTGTATGAAGGGGAGAGAGCAA GAACAAAGGATAACAATCTTCTTGGGAAGTTTGAGCTTGCTGGGATTCCACCAGCTCCGAGAGGAGTACCTCAGATCAAT GTGTGTTTCGACATTGATGCGAATGGTATTCTGAATGTTTCTGCAGAGGATAAAACTGCTGGTGTGAAGAACAAGATTAC GATTACCAATGATAAGGGGAGGTTGAGCAAGGAAGAGATTGAGAAGATGGTGCAGGATGCGGAGAAGTATAAGGCAGAGG ATGAGGAGGTGAAGAAGAAGGTGGATGCGAAGAACGCGCTGGAAAACTACGCTTACAACATGAGGAACACGATTAAGGAT GAGAAGATTGGAGGGAAGTTGAGTCCTGATGATAAGGAGAAGATTGAGAAGGCTGTGGAGGGGGCTATAGAGTGGTTGGA GGGGAATCAGCTGGCTGAGGTGGATGAGTTTGAGGATAAGCAGAAGGAGTTGGAGGGGATTTGTAATCCCATCATTGCTA AGATGTATCAGGGTGGTGATGTGCCTATGGGTGGTGCTGATGATGACATGGGTGGTGGTGCTGGTGCTGGGTCAGGTTCT GGAGCTGGACCTAAGATTGAGGAGGTGGACTAA
CDS sequence (LotjaGi4g1v0289500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACAAAAGAAGGCAAAGCAATCGGCATAGACCTCGGCACAACCTACAGCTGCGTCGGCGTCTGGCAAAACGACCG CGTCGAGATCATCCCCAACGACCAAGGCAACCGCACAACCCCATCCTACGTCGCCTTCACCGACACCGAGCGACTCATCG GCGACGCCGCGAAGAATCAAGTAGCCATGAACCCACAGAACACCGTCTTCGACGCGAAGCGTCTCATCGGCCGCAGATTC TCCGACCCATCTGTCCAAAACGACATGAAGCTCTGGCCATTCAAGGTCGTTTCAGGCCCCGCTGAAAAGCCCATGATCGT CGTCAACTATAAAGGCGAGGAGAAAACGTTCGCAGCTGAAGAAATCTCCTCCATGGTGTTAGTGAAAATGCGTGAGGTAG CAGAAGCGTTTCTGGGTCATGCTGTGAAGAACGCTGTTGTTACTGTTCCTGCTTACTTCAACGATTCTCAGAGACAAGCT ACAAAAGATGCAGGGGCGATTTCAGGGTTGAATGTTCTGCGAATCATCAATGAACCCACTGCTGCTGCGATTGCGTATGG TTTGGACAAGAAAGCTTCGAGGAAAGGTGAGCAGAATGTGCTGATTTTTGATCTGGGTGGTGGAACTTTTGATGTGTCTC TGTTGACGATTGAGGAGGGGATTTTCGAGGTGAAGGCCACTGCAGGGGATACTCATCTCGGTGGTGAAGATTTTGATAAC AGGATGGTGAATCATTTTGTGTCTGAGTTCAAGAGGAAGAACAAGAAGGATATCAGTGGAAATGCCAGAGCGTTGAGGAG GTTGAGGACTGCATGTGAGAGAGCGAAGAGGACTCTGTCTTCCACTGCACAGACAACGATTGAGATTGATTCGTTGTATG AAGGGATTGATTTCTATGCGACAATTACCAGGGCGAGATTTGAGGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAG CCGGTGGAGAAGTGTCTAAGGGATGCGAAGGTTGATAAGAGCAGTGTTCATGAGGTTGTTCTGGTTGGTGGGTCGACCAG GATTCCGAAGGTTCAGCAGCTTTTGCAGGATTTCTTCAATGGGAAGGAGCTTTGCAAGAGTATTAACCCCGATGAAGCTG TGGCCTACGGTGCGGCGGTGCAGGCGGCGATTTTGAGCGGTGAAGGGGATGAGAAGATGGTGCAGGATGCGGAGAAGTAT AAGGCAGAGGATGAGGAGGTGAAGAAGAAGGTGGATGCGAAGAACGCGCTGGAAAACTACGCTTACAACATGAGGAACAC GATTAAGGATGAGAAGATTGGAGGGAAGTTGAGTCCTGATGATAAGGAGAAGATTGAGAAGGCTGTGGAGGGGGCTATAG AGTGGTTGGAGGGGAATCAGCTGGCTGAGGTGGATGAGTTTGAGGATAAGCAGAAGGAGTTGGAGGGGATTTGTAATCCC ATCATTGCTAAGATGTATCAGGGTGGTGATGTGCCTATGGGTGGTGCTGATGATGACATGGGTGGTGGTGCTGGTGCTGG GTCAGGTTCTGGAGCTGGACCTAAGATTGAGGAGGTGGACTAA
Protein sequence (LotjaGi4g1v0289500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRF SDPSVQNDMKLWPFKVVSGPAEKPMIVVNYKGEEKTFAAEEISSMVLVKMREVAEAFLGHAVKNAVVTVPAYFNDSQRQA TKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN RMVNHFVSEFKRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCME PVEKCLRDAKVDKSSVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKMVQDAEKY KAEDEEVKKKVDAKNALENYAYNMRNTIKDEKIGGKLSPDDKEKIEKAVEGAIEWLEGNQLAEVDEFEDKQKELEGICNP IIAKMYQGGDVPMGGADDDMGGGAGAGSGSGAGPKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 393 | 390 | 0.0 | – | |
| PANTHER | 4 | 393 | 390 | 0.0 | ||
| SUPERFAMILY | 7 | 190 | 184 | 4.4E-70 | ||
| PRINTS | 7 | 20 | 14 | 1.7E-64 | – | |
| CDD | 8 | 386 | 379 | 0.0 | – | |
| Pfam | 8 | 389 | 382 | 6.5E-183 | ||
| Gene3D | 9 | 383 | 375 | 1.6E-177 | – | |
| ProSitePatterns | 11 | 18 | 8 | - | ||
| PRINTS | 35 | 47 | 13 | 1.7E-64 | – | |
| PRINTS | 57 | 65 | 9 | 1.7E-64 | – | |
| Gene3D | 70 | 117 | 48 | 1.6E-177 | – | |
| PRINTS | 145 | 165 | 21 | 1.7E-64 | – | |
| Gene3D | 191 | 370 | 180 | 1.6E-177 | – | |
| SUPERFAMILY | 195 | 387 | 193 | 3.15E-70 | ||
| ProSitePatterns | 202 | 215 | 14 | - | ||
| PRINTS | 208 | 218 | 11 | 1.7E-64 | – | |
| Gene3D | 234 | 311 | 78 | 1.6E-177 | – | |
| PRINTS | 336 | 352 | 17 | 1.7E-64 | – | |
| ProSitePatterns | 339 | 353 | 15 | - | ||
| PRINTS | 368 | 388 | 21 | 1.7E-64 | – | |
| Gene3D | 385 | 488 | 104 | 6.8E-39 | ||
| PANTHER | 391 | 499 | 109 | 0.0 | ||
| Pfam | 391 | 487 | 97 | 3.0E-12 | ||
| PANTHER | 391 | 499 | 109 | 0.0 | – | |
| SUPERFAMILY | 412 | 492 | 81 | 3.66E-31 | ||
| MobiDBLite | 490 | 520 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0289500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…