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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0291800 |
| Transcript ID | LotjaGi4g1v0291800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT2G44480.1 beta glucosidase 17; Swiss-Prot: sp|Q5Z9Z0|BGL24_ORYSJ Beta-glucosidase 24; TrEMBL-Plants: tr|A0A072UKL7|A0A072UKL7_MEDTR Glycoside hydrolase family 1 protein; Found in the gene: LotjaGi4g1v0291800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66353118..66357727) extracted from Lotus japonicus Gifu genome v1.2.
TATCAAGCTGAATCATCCTTAAAAAGCGAAAAGAGGGAACATGTATCAGATTAACATGGCATCATCTTGCAAACTCTTTT ACCTTTTGGGACTGGTTGCTTTAGTTCTTGTGATTACCAAATCGAATATTGTTCATTGCACTCATAATGTTGCTCCAATT CTTGATCTTGCTTCTTTGAACCGAAACAGTTTCCCTCCAGGCTTCATCTTTGGAGCTGGATCCTCCTCTTACCAGGTATA TTTTTAGTGTATATTTGTATTTCTGTTATATAAGCTCAACATTGATCGGTTGATCAATGTTTGAGTTAGGACAAAAATAT TGCTTCTCCCTTGGTGCTTGGATATGTGTTTTCCAAATGAGCACTTAAATTAAAATAAATTAATTAAGCAGGCAAATATT GGATTATTTGGGGTATAGGGTTACCTCAACGCATATATAAAAAAGTAGTGGCTAATAAATTAGCACACCCATACAAGAGG AATACATAAGAAAATTAAATACTACTAATATATGCTCTTTCTATTTCAAAATAGTTGTTCAGAAAGAGAAAAGCGAAGCA ATGAACATACTAAAAAAGTATGTTATTAATTTTTTTTTGAGTGATGAAGATAATATAGATAGAGAATAGAAGTTTGGGAA CAAGGCTCTCCCAAGTAAGCCACAACACAGCAAAGCAAAAGAAACATTACAAATATAATTAATAGTTTAATACTGCTGAT TTTATAAAAGATATTATTTGTTTTCATATTTTACTTTTTAGAGTATGTTGTACGTTATATGAATTTTTTTTCTCAACAGA CAGTTGTTATGATGTTGATTATGTTGTGTTTGCAATTTGTATAATATATATTATGTGTATAGTTTGAAGGTGGAGCAATG GATGGTGGTAGAGGGCCAAGTATATGGGATACATTCACCCATGAATATCCAGGTCTCTTAGGCTAAAATTTTATGTCCTT ATTTAGTGTTCATTTCCCCGTCTCTTTTATTTAAAGAACCGAAGCTTTTTTTTTCTTTATCTTCACAAACATAATATTGA CAATGCATGTGCATATCTTGAATTGAAATATGCAGAAAAGATAGCGGATAGAAGCAATGGAGATGTGGCCATTGACACAT ATCACAATTACAAGGTACTCCAACTCCAAGAGCCTGATTTCTTGGTGGCACTCTTTCAAAGTATTTGTTTCTTGTTAACA AGTGCGTATGATGCACTTTGAGTTGAATTGAAATTATAATAAATTAAATTAAATAAATTCCTGAGTAGTTTCTGTTGATT TCAATTTTTATTTTTGGAGAATGCTAAATATATTTAATTTGGTCCTTATATATTACAGGAAGATGTTAAGATGATGAAAG ATATGAACTTAGATTCATACAGATTCTCCATATCTTGGTCAAGAATATTGCCGAGTAAGTCAAATGCTGATCAATCCCTA TTGTTCTGAACTTCACATTGTTGGTGATGGTTAGCATATTCAAAATCATTTTTTTTTAAACGTGATATTTATCCACAACA GAAGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATCAACTATTACAACAATTTCATCGATGAACTATTGGCTAATGG TCAGATCCACAAACTCAATTGGCTCAACTTAATACATATATATACTTTGACTTGATCTTGTCATATTCTTTAATTTTTCT TTTAGATGCTATATATGAGTAGCACTAGCTAATTGATTAACAATATATTAATTTCAGGTATAGAACCATTTGTGACCCTT TTCCATTGGGATCTTCCGCAAGCTTTAGAAGATGAGTATGGTGGCTTCTTAAGCCCTCTCATAGTGTGAGTTTCAATTAC TAATTCAAAAATAGTGCTAGATATTCATCAACTCCTTAACAAATTGTTTAACACTTGATTGTAAAATTTATTTTCAGAAA AGATTTTCAAGACTATGCAGAGCTTTGCTTCAAGAAATTTGGCGATAGGGTGAAGCATTGGTTTACTTTGAATGAGCCAT GGAGTTATAGCCAAAATGGTTATGCAAATGGGAGAATGGCACCAGGTCGTTGTTCTTCATGGATGAACACAAATTGCACT GGTGGTGATTCAGCCACAGAGCCTTATTTAGTTTCACATTACCAACTTCTTGCTCATGCAGCTACTGTTCGTGTGTACAA GACCAAATACCAGGTTTGTTCTTTGCACAGACTCACTTACTTTATGTTAAAACTCAACTTCATTTATTAGAATAAGAAGG GTAATAGGACTTGATTTCGTTTATTAGAATAACGAGGGTATATAGAGCTCGAGCTCTTTATACCTCTTGATCATAAGGAC TGAAGGAGTTTGATATCATATCATGAATCAATTGGCTCACAAAAGACCCTGGATGATTTTATATTGTATTTCTAATATTA TGTTCTTGTGGGTTAGCGTGGGTCCAATAATTTGGAAAAGAAATTAAGGATAATTGTTGTTTTACATTTTTTTATAAAAA TTAAAATGTCAACAATAAACTAAAGTATTAAAACATTGCTTATATGTAGGCATCTCAAAAGGGCTTGATAGGCATAACCT TGGTAGCCAATTGGTACCTGCCGCTCTCAGACACCAAATTTGATCAAAAGGCTGCTGAAAGAGCAATGGACTTCATGTAT GGATGGTAAGAGCTCATCTCTCTCTCTGAATTTTGATTCATCTTCAAAATGCACATACATATGCATGTGTAGCACCTAAG AAAAATGAGATATTGGATATGGGATAGAAAGGAAAGAACTATACCTTAATGCCAGGATCCATGCATGATCACTGGTTTAT CAAAGGCATATATGCATTAATTTGTCGTTTCAGTAAGGCCTTAAATATTTAGGTAAGGACTTTCATAATTGACTTTAAAA TAAGAATCGAGTCTTGAGAGAAACTTATGATGATAGCATATGGATTTCAAAATTGATTACGAGGAAAGAGAAACTGATCC AAATATACTATAAGTCTTTGATAATGACAACGCTCTACTTTTGGAGATAATTAAGGATTTATGAGCTTTTTTTACTAAAT TTGAATTGAATCAATTGATTTGTTCAGGTATATGGATCCACTAACATCAGGAGAGTACCCCAAAAGCATGAGACTTCTTG TTGGAGCACGATTACCAAAGTTCACAACAGAGCAGGCTAGGCTCTTAAAAGGTTCATTTGATTTTATTGGCCTAAATTAT TACTCTTCAGCCTATGCCTCAGATGCACCTCAACTAAGAAATGCCAAACCTAGCTACTTAATAGATTCATTGGTCAATCC TGCATGTAAGGAACCTATCATCTACCCTTCTACAAGTTCTCTAAAATGTTTATATATATATATATATATATATATATGTT GAATTTCATCGTTGCTGATAATTAACAACTTGTATTTTGTATTCATGATTAATTGTAGTTGAGCGTGATGGCAAACCCAT AGGTATTAAGGTATGTTCATTGTCACATAAACTTGCAATTAACTATTTAACAAGTTTAATCCATTTGAAAAAAATATAAA AAAACCCTCTTCCAATAATTATGCAGGTTGCTTCTGATTGGTTATACGTTTATCCAAAAGGAATCCAAGATCTTTTGTTA TATACCAAGGAAAAGTACAACAACCCTTTGATTTACATCACTGAAAATGGTAAGAGTAAACATCTTTATGTATATCAAGT TTAGTTTCCTCGAAAGCGATATCATTGATTACACACTGAAACCGTATGTTCTAATTTAGTGTTTTCTTCCCTGTCACACC AGTTAAATTCTGTCAAGACACAATTTTATTGGTGAGACATGGAACAAACCATTAAATTGAAACAGGGGATCTTCATCCCA TACATAAGAATATGAGATTTAATTTTGTTAACCTTTTGTATTAATGGGGTACGACAAATTGCAACTTAACTTGCAGGTAT AAATGAATATGAAGATTCAACACTGTCAGTTGAGGAATCACTCATGGATATTTTCCGAATTGATTATCTTTATCGTCATC TCTTTTATCTTCGATCAGCAATTAGGTAGGTAGCCATTTACATATATAACAAATTGTTGTAATTTTCATCATACAATAAC ACATTTTGATATTAATCATTTCAATTTTATATGACAGGAATGGTGTGAATGTCAAGGGATATTATGTATGGTCTTTGTTC GACAATTTTGAGTGGTCCTCGGGTTACACTGTACGATTTGGGATGACTTTTGTGGATTACAAAAATGGCTTGAAAAGATA TGAGAAATTTTCTGCATTGTGGTTTAAGGACTTCCTCAAAAAAGAAACTAGACTTTATGCTTCTAGTGAATAATATGATG TTCATTGATCATTAAAAATTATACTTGTAAGTAATTATTATTTTTTATTTTTTTAAAAGGTCCTATTCGACCTGAAAAGG AATAAAAAGTAGATGTGCAGATGTATATTGATGTTGTATAAATTTGATAGTTAGTCATCCTACATATGAAAAAAAAGTGA AAAATTTTACATGTTCATTTTACGGGTTAATCATCAAATTAGTCCTTATGTTTGTAGAGGAATTTGAGTTCAATCCCTCC CCGGAAAAATGTTTGCTTCATATCCCTACAATTGCAGCCAGTTTGGTTTT
CDS sequence (LotjaGi4g1v0291800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATCAGATTAACATGGCATCATCTTGCAAACTCTTTTACCTTTTGGGACTGGTTGCTTTAGTTCTTGTGATTACCAA ATCGAATATTGTTCATTGCACTCATAATGTTGCTCCAATTCTTGATCTTGCTTCTTTGAACCGAAACAGTTTCCCTCCAG GCTTCATCTTTGGAGCTGGATCCTCCTCTTACCAGTTTGAAGGTGGAGCAATGGATGGTGGTAGAGGGCCAAGTATATGG GATACATTCACCCATGAATATCCAGAAAAGATAGCGGATAGAAGCAATGGAGATGTGGCCATTGACACATATCACAATTA CAAGGAAGATGTTAAGATGATGAAAGATATGAACTTAGATTCATACAGATTCTCCATATCTTGGTCAAGAATATTGCCGA AAGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATCAACTATTACAACAATTTCATCGATGAACTATTGGCTAATGGT ATAGAACCATTTGTGACCCTTTTCCATTGGGATCTTCCGCAAGCTTTAGAAGATGAGTATGGTGGCTTCTTAAGCCCTCT CATAGTAAAAGATTTTCAAGACTATGCAGAGCTTTGCTTCAAGAAATTTGGCGATAGGGTGAAGCATTGGTTTACTTTGA ATGAGCCATGGAGTTATAGCCAAAATGGTTATGCAAATGGGAGAATGGCACCAGGTCGTTGTTCTTCATGGATGAACACA AATTGCACTGGTGGTGATTCAGCCACAGAGCCTTATTTAGTTTCACATTACCAACTTCTTGCTCATGCAGCTACTGTTCG TGTGTACAAGACCAAATACCAGGCATCTCAAAAGGGCTTGATAGGCATAACCTTGGTAGCCAATTGGTACCTGCCGCTCT CAGACACCAAATTTGATCAAAAGGCTGCTGAAAGAGCAATGGACTTCATGTATGGATGGTATATGGATCCACTAACATCA GGAGAGTACCCCAAAAGCATGAGACTTCTTGTTGGAGCACGATTACCAAAGTTCACAACAGAGCAGGCTAGGCTCTTAAA AGGTTCATTTGATTTTATTGGCCTAAATTATTACTCTTCAGCCTATGCCTCAGATGCACCTCAACTAAGAAATGCCAAAC CTAGCTACTTAATAGATTCATTGGTCAATCCTGCATTTGAGCGTGATGGCAAACCCATAGGTATTAAGGTTGCTTCTGAT TGGTTATACGTTTATCCAAAAGGAATCCAAGATCTTTTGTTATATACCAAGGAAAAGTACAACAACCCTTTGATTTACAT CACTGAAAATGGTATAAATGAATATGAAGATTCAACACTGTCAGTTGAGGAATCACTCATGGATATTTTCCGAATTGATT ATCTTTATCGTCATCTCTTTTATCTTCGATCAGCAATTAGGAATGGTGTGAATGTCAAGGGATATTATGTATGGTCTTTG TTCGACAATTTTGAGTGGTCCTCGGGTTACACTGTACGATTTGGGATGACTTTTGTGGATTACAAAAATGGCTTGAAAAG ATATGAGAAATTTTCTGCATTGTGGTTTAAGGACTTCCTCAAAAAAGAAACTAGACTTTATGCTTCTAGTGAATAA
Protein sequence (LotjaGi4g1v0291800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYQINMASSCKLFYLLGLVALVLVITKSNIVHCTHNVAPILDLASLNRNSFPPGFIFGAGSSSYQFEGGAMDGGRGPSIW DTFTHEYPEKIADRSNGDVAIDTYHNYKEDVKMMKDMNLDSYRFSISWSRILPKGKLSGGINQEGINYYNNFIDELLANG IEPFVTLFHWDLPQALEDEYGGFLSPLIVKDFQDYAELCFKKFGDRVKHWFTLNEPWSYSQNGYANGRMAPGRCSSWMNT NCTGGDSATEPYLVSHYQLLAHAATVRVYKTKYQASQKGLIGITLVANWYLPLSDTKFDQKAAERAMDFMYGWYMDPLTS GEYPKSMRLLVGARLPKFTTEQARLLKGSFDFIGLNYYSSAYASDAPQLRNAKPSYLIDSLVNPAFERDGKPIGIKVASD WLYVYPKGIQDLLLYTKEKYNNPLIYITENGINEYEDSTLSVEESLMDIFRIDYLYRHLFYLRSAIRNGVNVKGYYVWSL FDNFEWSSGYTVRFGMTFVDYKNGLKRYEKFSALWFKDFLKKETRLYASSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 33 | 33 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| PANTHER | 23 | 530 | 508 | 0.0 | – | |
| PANTHER | 23 | 530 | 508 | 0.0 | ||
| Phobius | 24 | 28 | 5 | - | – | |
| Phobius | 29 | 531 | 503 | - | – | |
| Gene3D | 36 | 522 | 487 | 4.6E-225 | – | |
| SUPERFAMILY | 38 | 521 | 484 | 8.09E-189 | ||
| Pfam | 48 | 523 | 476 | 2.9E-157 | ||
| ProSitePatterns | 55 | 69 | 15 | - | ||
| PRINTS | 349 | 363 | 15 | 2.6E-23 | ||
| PRINTS | 425 | 433 | 9 | 2.6E-23 | ||
| ProSitePatterns | 425 | 433 | 9 | - | ||
| PRINTS | 448 | 459 | 12 | 2.6E-23 | ||
| PRINTS | 469 | 486 | 18 | 2.6E-23 | ||
| PRINTS | 493 | 505 | 13 | 2.6E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0291800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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