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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0298600 |
| Transcript ID | LotjaGi4g1v0298600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding protein; TAIR: AT5G57580.1 Calmodulin-binding protein; Swiss-Prot: sp|Q9FKL6|CB60B_ARATH Calmodulin-binding protein 60 B; TrEMBL-Plants: tr|V7C9H1|V7C9H1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0298600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67252674..67258467) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAGAGACCAACGACCGATAAAATTGGTATGGGGAAAAGGACCCTGGAGAGTGGAGAAGATGAACAGCCTGAACGAAA GAGGCCTGCTCTTGCCAGGTAATTCTTGCTCTTTCTTCAGTTGTGTGCTTCTGTGAATTTGCTATGTTTAATCCACTATT TTGGCTCAGTTATTATCATTTTTTTATAGTTATTTTATCACTATTCGTGCTAGCAAGTAATTTGTGTTTAATTGGGGTAT ATGTGGGCGGGTGCTAATTTAAAGTTAACCAGTAAATTGCTGTTGGAAGGAATGTCACTTTGACTGAATAATCTGCTTAC ATCTGAAGATATTTTTTCTGACTGGTTATATCACTATTCCTAATCTTTGAAGAAGTATTGTTAGACAGCCAGCCCATGGG GGTGTAACACCTCAGTTGAGATGATAAAGATAGGAATAGAAGAGAGGGGAGTGAACTATGTGATAGGTGGTATAGTGAAG CTGGAGGTGCTGTTGGGATGTCTGAAAATTGGAATTGCTAGTTTTTAAGCCTAACTTGTTGTGCTAGTAGAGTTAGACTA CCGTGGTCACACATTTTGTTGTCAGTAGACATTGTTGGAATTGATAATTACTTGTTACCAGGTTTGAGAAACCCCATTTC AACTTCACCAGTTCACTGTAGTGGCTCATGTGAAATTTTTCTTCTTCATAGTTGTGATTCCTTTGAGAGTACCATTATAT CATGCAATACAAAGATTCTTTCTGATATTTCGGAATCAACCTAAAAGTCAAATAGTGAATTTTCTTACAAGCTAGCTTTT ATTGATTTCTTTTTCTTGTTTACTCTTTCTTTTGCTTTTTCTGCTCTTTCTTAAAAGGAGGAAATCTTAATATTTGATTG TGTAGCTCGTTGTTTTTCTTCACTAGTATTATTCCTTCTTTAATCAAAATTCTCTTGCAAAAAGCTGTATCTCAGAATAT GATAATATGTTTATGACTTGAGATGAGAGATCGCATCTCTTTGCTTATGATATAAAAAAAATGTAGAATTTGGCTCCTTG AGATTCAGTTGAAACTTTACTTCCTTGGTTTGAGAGTATGAACTTTGGGCATTGGAGGGAGCATCTCCCAGTGCATTACC TGCAGTCTTCCTCTATTCTTCGAAATCCCTTCATCTTTTTTTTCTTTCTTTCTTAAGAACGTGTTTTCTATTGTTTGCCA ATGAACATTATGATTTGTTCAAATGCATGTAAAAAAATTCTAAGGAGTTAGGATGAAATAATCAAATCAGTATTCAGTAA CTTGAAAACAAATTCAGTGGCATGTTTCAAGTAAATCAATGTATATGCTTATAAACTAAAATAATTATGTGTTTATTCAG AAAATTATATGTCGAACTTATAATGAAAGATTTCATTTTTTATTAGTGTTAGTCCATATGCCTAGTTTCTTATGTATTTA TTTCTATTAGTTTCTTAGAACTGATACACGTGTATTTTACAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGA AGCTTTGCTCATCTTTAGAACCTATTCTTCGGAGAGTTGTAAGACAGTTGGCTTCACACTACTCTCCGCTGTTTATTTTT CTTTCTGTCATGCGTAGTTTTGGGTGGAGGCCCAGGGGCATTGCGTATTTCATCAATTTTTAAAAGTTATGTCATCTTTT ATGCAATTTGATTGTGCTGGAGTATGTTTTGAGTGTGTATGTTCTTCTGCCTTTTTGTAAAAATTTCACTCTTTAATGAT AGAAGTAAAATCACATGCTAATTTCTCTTGCTGAAGGAGATTATAGTTCACTGCCTGACAACAGTACATTGCTTGTGCAT TTTGCTTTAATGTTCCTTTTAACTCCATCTTTTACCTTCTTTTATGGTATGCCATCATTAGCTAGACAATTTGTGTCAGG ACATGTGTTTGCCTTGTGATCAAGAAAAATGAATGATTTGTATTCTTAGAAGAACTTATTTCGTAACATGGCTTGTTTTG TTGTACCTGAAAGTTCCTGTATTTGGTTCTTAATTGTTTTATGATATTAATGTGAAACAGGTGAGTGAAGAAGTGGAGCG TGCTTTGGCAAAGTTAGGTCCTCCAAGACTCAGTGGAAGGTCTAAGAAATTCTTTTCCACGTTAATTTCAAAATATTTTA GTTTTCATAATTTCTTTTGACTATATTTTCTCTATGCTTTTTTTCATGTAATTGTCTGCAGACCAAGCAATGATACAATT GGATTAATTAATGTGCATTTAGTGGCCATAATTTTTACGTTTACTTTTGAGTTTTGAGGCCTTTTCTCTATTGTCGATTT TGGTTCCATGGTGTAAATTAGGTGTTCTTTAAGTGTTTAATTTCTTGGTTCTAGAGTGGAAAATATATCTTCTTTCCCTC CCTCTCTCTTTCAATTATCTTGTGATGGTTGACTCCAAACTGCAGTATCTATAAATAAGATAATACTCAAATGTACCACA TAGATGGTTGTGTATGATTAAACTCATCCAAATTATATTTTTGCTACTGGCTGGTATTTTGAAGGATAACCAAGAATGCT TTATTTTTTACTCGGGTAGGATTACAATTGACTGGGAAGTTATAATGAGAAGATAGAGGACTAGGGATCATCTTAAAAGA GGCCAACCAACAGTTAAACTAAGAAAATAATCCTGTCTCAAAAGATGATATGGCGGGGAAAATCTATGGCTAAAACTTCT AGCATTCAGATCTAATGAAATGCAGCATGCTCTTGCTATCTAAGTGCACTTCCACAAGACCTTACTATTTTTTCTGTAAA TCGAAATCCATGAAACTGAACAAGAGAATTGTAATTTTAACAGAAATAATTTTGTGGTTCCACTGGCTATTTAGACACTG TTCAATCAACTGCTCTGCCAGGAATTAGCTTTCATGATTTCCTGTGTCTTATTTAATCCATTTGTATATATATGTTCAAT GGCCTTGGTTTTGGAAGATTCATTGGGGCAATGGTATAGTATGGTGGTAATTATTGAATGTGATACCCTTCAATTTATTT ATTTTTTATCGGTGACCACATATACATAACAAAAATAAGCTTTGGGTTCTGGTAAGCATTTCTAGATATCAAGGTATTTT ATGTGATCCATCTCCATCTGAAACATGGAGATGTAGTGCATTGATTTTTCTTTTACTGTTGCCCTTATTTTCGGTCTGAG ACATCAGATAGAAACATTGTACCTCAGTACGTCTGGTATTTTCTTCTAACAGTTCAAAATTCCAGGTCTTCTCCTCCTAA AATGATTGAAGCTCCTAATGGTAGAAACTTGCGGCTGCAATTTAGGTCCCGGCTGTCTCTTCCCCTATTCACGGGAGGAA AAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTCCTGAGTGATGCCACTAGTGGAAATGTTGTAACATCTGGACCT GAAGCCTCTATGAAACTTGATGTTGTTGTCCTTGAAGGTGATTTTAATAACGAAGATGATGAAGATTGGAATCAAGAAGA ATTTGAAAGCCATGTGGTGAAAGAACGAGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACGCTCAAGGAAG GAGTTGGAACATTGGGGGAACTGACATTTACTGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCCTGAAG GTGGCATCAGGTTTTTGCGAGTCTATACGGATTCGTGAGGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGA ATGTAGGGTTATGCTTTTGCATCTTCTAGTTTTGCTCTAGCATTAGTGCTCTACCTGCTCCTATTCCTTAACACTGTCAT TCTAATTTCATATTTTGTCACAGTATATAAAAAACATTATCCTCCTGCATTGAATGATGATGTGTGGAGATTGGAGAAGA TAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCAGGAATATTCACAGTTGAAGATTTTCTTCGGCTTGCAGTT AAAGATCAACAAAAACTGCGGAATGTAAGTTTAGGTTTTTTTGTCTTCATCTTAAAGTTGGGTCTTTCCAGCCAATTCCT TATATTATTCAACTGTAGATCCTTGGGAGTGGAATGTCAAACAAGATGTGGGAGGCTCTCTTAGACCATGCAAAGACTTG TGTTCTAAGTGGGAAGCTCTATGTTTATTATCCAGAAGATACAAGAAATGTTGGTGTTATTTTTAACAATGTCTATGAGC TGCGTGGCCTTATAACAGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTAGTCAGCATCATGCA TTTCTTCCACTGTTCTCTGTAGACAATTCAATTACTTTAAGGGTTTGATGACTTGAGTATGATAGTTTTAATTGATCGGA AATGATATCTGTATTTTCTCTTACACTTGCAAATATTCCAATATTGAAACCAATAAACAAGTGTGTGTTATGTTACTGAC TTACAAAAGGCTAAATAATGATCTGGACTGTAACATTAAGAATTATCAAGGCTGAAAGTTTGCAATTTCTTTTTAAAGCT TTCTGTTAGGAATAGGGTAAGTTGATGATACCTTCAAAATGCTCTTGCAAATCCAGGTTTATGTAGATTCGTTGGTAAAG AAGGCCTATGACAATTGGGATCAGGTAGTAGAGTATGATGGCAAATCACTTGTGAATGCTGAGCAGAATAATAGTTCTGT TGAATCTGAAAATGAACTTCATCTAGAGTCAATTGATTATGGTAGTGGTTTGGGTCATCAACTGCAACTTCCCCTCCCAA TGCCTGTTCCTTCTGAACAGCAAATGAATTCAGGGATGGCGGTTGGAGGTAAGCATTCTTTTTTCCACGAACTCCAATTC GATGGATCCTCTCTTTTTGTTCTTCCTCCCTCCTTTTCTTTTGGAACAGGGGTGTCAGATTTTCAGTTACGTATCTCAAA TATAATTTCACATTACAGCTTTCTGATGATAATGAAATAGATGAAATGTTTTTTTGTAATATTGTTGATTAACAAATATC AAGATTAAAAAAATAGTTATAAAATGAATCTTCTACCCCTGAAAACAAAAAATAAAAATAAAATATGGCATATGCATGAA TTAATTTCTTTACTTGCAAAGTTCCATACAACGTTGCTGATTGTGCATGTCTGATGATCTTAAGATCTAAATGTGTGCTA TACATTCTCTTTTCAGGTTATGAAAATAGTTTGGTAACAAGATATCCAACCCACTCATTAATTGCAAACTCCAACTCCCG GAGTCAGTTTGACAGCTCATTATATCTCTCTAGTGACCAATTAATAAGCAATGCTCATCAAACCCAAAGCACTAGGAATG ATCATGGTACAGTAGGGTTAGCTCTTGGCCCTCCTCAATCATCAACATCAGGGTTCCATGCTGGTAGCTCCTCGGTTCAG TCGTCTACCCTAAATCCTTTTGATGATTGGTCGCAGAACAGGGACAAAGGGGTTGATGATTTCTTTTCAGAAGAAGAAAT CCGCATTAGAAGTAATGAGATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATTCCT CCATGAATGCTGAGGATGTCTATTCATACCCTTCATTCATGCCATCTCCGATGCCTAACATAGACGAGGATCGCTCTCGT CCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGAGAGCGGCTGA GAGGCGGGCACAGATAGAGGAGATAGATGATTAG
CDS sequence (LotjaGi4g1v0298600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAGACCAACGACCGATAAAATTGGTATGGGGAAAAGGACCCTGGAGAGTGGAGAAGATGAACAGCCTGAACGAAA GAGGCCTGCTCTTGCCAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTA TTCTTCGGAGAGTTGTGAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTCCAAGACTCAGTGGAAGGTCTTCT CCTCCTAAAATGATTGAAGCTCCTAATGGTAGAAACTTGCGGCTGCAATTTAGGTCCCGGCTGTCTCTTCCCCTATTCAC GGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTCCTGAGTGATGCCACTAGTGGAAATGTTGTAACAT CTGGACCTGAAGCCTCTATGAAACTTGATGTTGTTGTCCTTGAAGGTGATTTTAATAACGAAGATGATGAAGATTGGAAT CAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGAGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACGCT CAAGGAAGGAGTTGGAACATTGGGGGAACTGACATTTACTGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTG GCCTGAAGGTGGCATCAGGTTTTTGCGAGTCTATACGGATTCGTGAGGCTAAGACAGTGGCTTTCACAGTTAAAGATCAT AGAGGAGAATTATATAAAAAACATTATCCTCCTGCATTGAATGATGATGTGTGGAGATTGGAGAAGATAGGCAAGGATGG GTCATTTCACAAGAAGCTGAATAATGCAGGAATATTCACAGTTGAAGATTTTCTTCGGCTTGCAGTTAAAGATCAACAAA AACTGCGGAATATCCTTGGGAGTGGAATGTCAAACAAGATGTGGGAGGCTCTCTTAGACCATGCAAAGACTTGTGTTCTA AGTGGGAAGCTCTATGTTTATTATCCAGAAGATACAAGAAATGTTGGTGTTATTTTTAACAATGTCTATGAGCTGCGTGG CCTTATAACAGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCGTTGGTAAAGA AGGCCTATGACAATTGGGATCAGGTAGTAGAGTATGATGGCAAATCACTTGTGAATGCTGAGCAGAATAATAGTTCTGTT GAATCTGAAAATGAACTTCATCTAGAGTCAATTGATTATGGTAGTGGTTTGGGTCATCAACTGCAACTTCCCCTCCCAAT GCCTGTTCCTTCTGAACAGCAAATGAATTCAGGGATGGCGGTTGGAGGTTATGAAAATAGTTTGGTAACAAGATATCCAA CCCACTCATTAATTGCAAACTCCAACTCCCGGAGTCAGTTTGACAGCTCATTATATCTCTCTAGTGACCAATTAATAAGC AATGCTCATCAAACCCAAAGCACTAGGAATGATCATGGTACAGTAGGGTTAGCTCTTGGCCCTCCTCAATCATCAACATC AGGGTTCCATGCTGGTAGCTCCTCGGTTCAGTCGTCTACCCTAAATCCTTTTGATGATTGGTCGCAGAACAGGGACAAAG GGGTTGATGATTTCTTTTCAGAAGAAGAAATCCGCATTAGAAGTAATGAGATGCTAGAGAATGAAGATATGCAGCACTTG CTTCGCCTCTTCAGCATGGGAGGTCATTCCTCCATGAATGCTGAGGATGTCTATTCATACCCTTCATTCATGCCATCTCC GATGCCTAACATAGACGAGGATCGCTCTCGTCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGT GGGGCTTCTTTATCAGGAAGAGAGCGGCTGAGAGGCGGGCACAGATAGAGGAGATAGATGATTAG
Protein sequence (LotjaGi4g1v0298600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQRPTTDKIGMGKRTLESGEDEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPPRLSGRSS PPKMIEAPNGRNLRLQFRSRLSLPLFTGGKVEGEQGAPIHVVLSDATSGNVVTSGPEASMKLDVVVLEGDFNNEDDEDWN QEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTVAFTVKDH RGELYKKHYPPALNDDVWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLAVKDQQKLRNILGSGMSNKMWEALLDHAKTCVL SGKLYVYYPEDTRNVGVIFNNVYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYDNWDQVVEYDGKSLVNAEQNNSSV ESENELHLESIDYGSGLGHQLQLPLPMPVPSEQQMNSGMAVGGYENSLVTRYPTHSLIANSNSRSQFDSSLYLSSDQLIS NAHQTQSTRNDHGTVGLALGPPQSSTSGFHAGSSSVQSSTLNPFDDWSQNRDKGVDDFFSEEEIRIRSNEMLENEDMQHL LRLFSMGGHSSMNAEDVYSYPSFMPSPMPNIDEDRSRPGRAVVGWLKIKAAMRWGFFIRKRAAERRAQIEEIDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PANTHER | 12 | 631 | 620 | 0.0 | – | |
| PANTHER | 12 | 631 | 620 | 0.0 | ||
| MobiDBLite | 13 | 28 | 16 | - | – | |
| Pfam | 93 | 384 | 292 | 2.5E-129 | ||
| MobiDBLite | 482 | 527 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calmodulin binding | Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
Expression pattern of LotjaGi4g1v0298600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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