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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0298600 |
| Transcript ID | LotjaGi4g1v0298600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding protein; TAIR: AT5G57580.1 Calmodulin-binding protein; Swiss-Prot: sp|Q9FKL6|CB60B_ARATH Calmodulin-binding protein 60 B; TrEMBL-Plants: tr|G7JD14|G7JD14_MEDTR Calmodulin-binding protein; Found in the gene: LotjaGi4g1v0298600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67254141..67258467) extracted from Lotus japonicus Gifu genome v1.2.
ACGTGTATTTTACAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTC TTCGGAGAGTTGTAAGACAGTTGGCTTCACACTACTCTCCGCTGTTTATTTTTCTTTCTGTCATGCGTAGTTTTGGGTGG AGGCCCAGGGGCATTGCGTATTTCATCAATTTTTAAAAGTTATGTCATCTTTTATGCAATTTGATTGTGCTGGAGTATGT TTTGAGTGTGTATGTTCTTCTGCCTTTTTGTAAAAATTTCACTCTTTAATGATAGAAGTAAAATCACATGCTAATTTCTC TTGCTGAAGGAGATTATAGTTCACTGCCTGACAACAGTACATTGCTTGTGCATTTTGCTTTAATGTTCCTTTTAACTCCA TCTTTTACCTTCTTTTATGGTATGCCATCATTAGCTAGACAATTTGTGTCAGGACATGTGTTTGCCTTGTGATCAAGAAA AATGAATGATTTGTATTCTTAGAAGAACTTATTTCGTAACATGGCTTGTTTTGTTGTACCTGAAAGTTCCTGTATTTGGT TCTTAATTGTTTTATGATATTAATGTGAAACAGGTGAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTCCAAG ACTCAGTGGAAGGTCTAAGAAATTCTTTTCCACGTTAATTTCAAAATATTTTAGTTTTCATAATTTCTTTTGACTATATT TTCTCTATGCTTTTTTTCATGTAATTGTCTGCAGACCAAGCAATGATACAATTGGATTAATTAATGTGCATTTAGTGGCC ATAATTTTTACGTTTACTTTTGAGTTTTGAGGCCTTTTCTCTATTGTCGATTTTGGTTCCATGGTGTAAATTAGGTGTTC TTTAAGTGTTTAATTTCTTGGTTCTAGAGTGGAAAATATATCTTCTTTCCCTCCCTCTCTCTTTCAATTATCTTGTGATG GTTGACTCCAAACTGCAGTATCTATAAATAAGATAATACTCAAATGTACCACATAGATGGTTGTGTATGATTAAACTCAT CCAAATTATATTTTTGCTACTGGCTGGTATTTTGAAGGATAACCAAGAATGCTTTATTTTTTACTCGGGTAGGATTACAA TTGACTGGGAAGTTATAATGAGAAGATAGAGGACTAGGGATCATCTTAAAAGAGGCCAACCAACAGTTAAACTAAGAAAA TAATCCTGTCTCAAAAGATGATATGGCGGGGAAAATCTATGGCTAAAACTTCTAGCATTCAGATCTAATGAAATGCAGCA TGCTCTTGCTATCTAAGTGCACTTCCACAAGACCTTACTATTTTTTCTGTAAATCGAAATCCATGAAACTGAACAAGAGA ATTGTAATTTTAACAGAAATAATTTTGTGGTTCCACTGGCTATTTAGACACTGTTCAATCAACTGCTCTGCCAGGAATTA GCTTTCATGATTTCCTGTGTCTTATTTAATCCATTTGTATATATATGTTCAATGGCCTTGGTTTTGGAAGATTCATTGGG GCAATGGTATAGTATGGTGGTAATTATTGAATGTGATACCCTTCAATTTATTTATTTTTTATCGGTGACCACATATACAT AACAAAAATAAGCTTTGGGTTCTGGTAAGCATTTCTAGATATCAAGGTATTTTATGTGATCCATCTCCATCTGAAACATG GAGATGTAGTGCATTGATTTTTCTTTTACTGTTGCCCTTATTTTCGGTCTGAGACATCAGATAGAAACATTGTACCTCAG TACGTCTGGTATTTTCTTCTAACAGTTCAAAATTCCAGGTCTTCTCCTCCTAAAATGATTGAAGCTCCTAATGGTAGAAA CTTGCGGCTGCAATTTAGGTCCCGGCTGTCTCTTCCCCTATTCACGGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAA TTCATGTTGTCCTGAGTGATGCCACTAGTGGAAATGTTGTAACATCTGGACCTGAAGCCTCTATGAAACTTGATGTTGTT GTCCTTGAAGGTGATTTTAATAACGAAGATGATGAAGATTGGAATCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACG AGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACGCTCAAGGAAGGAGTTGGAACATTGGGGGAACTGACAT TTACTGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCCTGAAGGTGGCATCAGGTTTTTGCGAGTCTATA CGGATTCGTGAGGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAATGTAGGGTTATGCTTTTGCATCTTCT AGTTTTGCTCTAGCATTAGTGCTCTACCTGCTCCTATTCCTTAACACTGTCATTCTAATTTCATATTTTGTCACAGTATA TAAAAAACATTATCCTCCTGCATTGAATGATGATGTGTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGA AGCTGAATAATGCAGGAATATTCACAGTTGAAGATTTTCTTCGGCTTGCAGTTAAAGATCAACAAAAACTGCGGAATGTA AGTTTAGGTTTTTTTGTCTTCATCTTAAAGTTGGGTCTTTCCAGCCAATTCCTTATATTATTCAACTGTAGATCCTTGGG AGTGGAATGTCAAACAAGATGTGGGAGGCTCTCTTAGACCATGCAAAGACTTGTGTTCTAAGTGGGAAGCTCTATGTTTA TTATCCAGAAGATACAAGAAATGTTGGTGTTATTTTTAACAATGTCTATGAGCTGCGTGGCCTTATAACAGGAGAACAAT TCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTAGTCAGCATCATGCATTTCTTCCACTGTTCTCTGTAGACAAT TCAATTACTTTAAGGGTTTGATGACTTGAGTATGATAGTTTTAATTGATCGGAAATGATATCTGTATTTTCTCTTACACT TGCAAATATTCCAATATTGAAACCAATAAACAAGTGTGTGTTATGTTACTGACTTACAAAAGGCTAAATAATGATCTGGA CTGTAACATTAAGAATTATCAAGGCTGAAAGTTTGCAATTTCTTTTTAAAGCTTTCTGTTAGGAATAGGGTAAGTTGATG ATACCTTCAAAATGCTCTTGCAAATCCAGGTTTATGTAGATTCGTTGGTAAAGAAGGCCTATGACAATTGGGATCAGGTA GTAGAGTATGATGGCAAATCACTTGTGAATGCTGAGCAGAATAATAGTTCTGTTGAATCTGAAAATGAACTTCATCTAGA GTCAATTGATTATGGTAGTGGTTTGGGTCATCAACTGCAACTTCCCCTCCCAATGCCTGTTCCTTCTGAACAGCAAATGA ATTCAGGGATGGCGGTTGGAGGTAAGCATTCTTTTTTCCACGAACTCCAATTCGATGGATCCTCTCTTTTTGTTCTTCCT CCCTCCTTTTCTTTTGGAACAGGGGTGTCAGATTTTCAGTTACGTATCTCAAATATAATTTCACATTACAGCTTTCTGAT GATAATGAAATAGATGAAATGTTTTTTTGTAATATTGTTGATTAACAAATATCAAGATTAAAAAAATAGTTATAAAATGA ATCTTCTACCCCTGAAAACAAAAAATAAAAATAAAATATGGCATATGCATGAATTAATTTCTTTACTTGCAAAGTTCCAT ACAACGTTGCTGATTGTGCATGTCTGATGATCTTAAGATCTAAATGTGTGCTATACATTCTCTTTTCAGGTTATGAAAAT AGTTTGGTAACAAGATATCCAACCCACTCATTAATTGCAAACTCCAACTCCCGGAGTCAGTTTGACAGCTCATTATATCT CTCTAGTGACCAATTAATAAGCAATGCTCATCAAACCCAAAGCACTAGGAATGATCATGGTACAGTAGGGTTAGCTCTTG GCCCTCCTCAATCATCAACATCAGGGTTCCATGCTGGTAGCTCCTCGGTTCAGTCGTCTACCCTAAATCCTTTTGATGAT TGGTCGCAGAACAGGGACAAAGGGGTTGATGATTTCTTTTCAGAAGAAGAAATCCGCATTAGAAGTAATGAGATGCTAGA GAATGAAGATATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATTCCTCCATGAATGCTGAGGATGTCTATTCAT ACCCTTCATTCATGCCATCTCCGATGCCTAACATAGACGAGGATCGCTCTCGTCCAGGCAGAGCTGTTGTGGGATGGCTG AAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGAGAGCGGCTGAGAGGCGGGCACAGATAGAGGAGATAGA TGATTAG
CDS sequence (LotjaGi4g1v0298600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGAAGCTCCTAATGGTAGAAACTTGCGGCTGCAATTTAGGTCCCGGCTGTCTCTTCCCCTATTCACGGGAGGAAA AGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTCCTGAGTGATGCCACTAGTGGAAATGTTGTAACATCTGGACCTG AAGCCTCTATGAAACTTGATGTTGTTGTCCTTGAAGGTGATTTTAATAACGAAGATGATGAAGATTGGAATCAAGAAGAA TTTGAAAGCCATGTGGTGAAAGAACGAGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACGCTCAAGGAAGG AGTTGGAACATTGGGGGAACTGACATTTACTGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCCTGAAGG TGGCATCAGGTTTTTGCGAGTCTATACGGATTCGTGAGGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAA TTATATAAAAAACATTATCCTCCTGCATTGAATGATGATGTGTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCA CAAGAAGCTGAATAATGCAGGAATATTCACAGTTGAAGATTTTCTTCGGCTTGCAGTTAAAGATCAACAAAAACTGCGGA ATATCCTTGGGAGTGGAATGTCAAACAAGATGTGGGAGGCTCTCTTAGACCATGCAAAGACTTGTGTTCTAAGTGGGAAG CTCTATGTTTATTATCCAGAAGATACAAGAAATGTTGGTGTTATTTTTAACAATGTCTATGAGCTGCGTGGCCTTATAAC AGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCGTTGGTAAAGAAGGCCTATG ACAATTGGGATCAGGTAGTAGAGTATGATGGCAAATCACTTGTGAATGCTGAGCAGAATAATAGTTCTGTTGAATCTGAA AATGAACTTCATCTAGAGTCAATTGATTATGGTAGTGGTTTGGGTCATCAACTGCAACTTCCCCTCCCAATGCCTGTTCC TTCTGAACAGCAAATGAATTCAGGGATGGCGGTTGGAGGTTATGAAAATAGTTTGGTAACAAGATATCCAACCCACTCAT TAATTGCAAACTCCAACTCCCGGAGTCAGTTTGACAGCTCATTATATCTCTCTAGTGACCAATTAATAAGCAATGCTCAT CAAACCCAAAGCACTAGGAATGATCATGGTACAGTAGGGTTAGCTCTTGGCCCTCCTCAATCATCAACATCAGGGTTCCA TGCTGGTAGCTCCTCGGTTCAGTCGTCTACCCTAAATCCTTTTGATGATTGGTCGCAGAACAGGGACAAAGGGGTTGATG ATTTCTTTTCAGAAGAAGAAATCCGCATTAGAAGTAATGAGATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGCCTC TTCAGCATGGGAGGTCATTCCTCCATGAATGCTGAGGATGTCTATTCATACCCTTCATTCATGCCATCTCCGATGCCTAA CATAGACGAGGATCGCTCTCGTCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCT TTATCAGGAAGAGAGCGGCTGAGAGGCGGGCACAGATAGAGGAGATAGATGATTAG
Protein sequence (LotjaGi4g1v0298600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIEAPNGRNLRLQFRSRLSLPLFTGGKVEGEQGAPIHVVLSDATSGNVVTSGPEASMKLDVVVLEGDFNNEDDEDWNQEE FESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTVAFTVKDHRGE LYKKHYPPALNDDVWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLAVKDQQKLRNILGSGMSNKMWEALLDHAKTCVLSGK LYVYYPEDTRNVGVIFNNVYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYDNWDQVVEYDGKSLVNAEQNNSSVESE NELHLESIDYGSGLGHQLQLPLPMPVPSEQQMNSGMAVGGYENSLVTRYPTHSLIANSNSRSQFDSSLYLSSDQLISNAH QTQSTRNDHGTVGLALGPPQSSTSGFHAGSSSVQSSTLNPFDDWSQNRDKGVDDFFSEEEIRIRSNEMLENEDMQHLLRL FSMGGHSSMNAEDVYSYPSFMPSPMPNIDEDRSRPGRAVVGWLKIKAAMRWGFFIRKRAAERRAQIEEIDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 548 | 547 | 1.9E-266 | – | |
| PANTHER | 2 | 548 | 547 | 1.9E-266 | ||
| Pfam | 10 | 301 | 292 | 1.7E-129 | ||
| MobiDBLite | 399 | 444 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calmodulin binding | Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
Expression pattern of LotjaGi4g1v0298600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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