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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0303200 |
| Transcript ID | LotjaGi4g1v0303200.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | A-kinase anchor protein 9, putative isoform 1; TAIR: AT5G57340.1 ras guanine nucleotide exchange factor Q-like protein; Swiss-Prot: sp|Q4ULS4|SYFB_RICFE Phenylalanine--tRNA ligase beta subunit; TrEMBL-Plants: tr|A0A151SRP3|A0A151SRP3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0303200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67844941..67848187) extracted from Lotus japonicus Gifu genome v1.2.
TGTGTACTTATCATTTTCCATTTCAAATACAATATTCATTTATAGTATGAACACACATCTTTCTCTCTCTAAATATCACA TAGTCACTCACTCATTCATATGAGACACATTGCTACTCCAGCTTTTCTCTTGCCTCCTTCCCTCACAGCCTGTCAAGCCT GAATTATTAACTAACCCCTTGATTATAGTTTTAAATTTGAGCTGTTTCCTTTGTTGTTTCCTAGTAAAGGGTTGATTAAT GTTTCTTACCTGTCAAGAGATTTGGTGCTGTCTATGAGCTTTCTCCAGATTCCCCAGGTGGTACTGCACTGTTTGGATTG ATCCATCCTCTGTCTTGGAAATGATTCAAGGAGAATCATGAGAGCATTGTTCTCTTTTAATATTAGTATTGGTCCAATGA GTAAGGCTGACTCATGCATAGATGCTGGCATGAAGGAGTGTTCAATGTCCCTCATAAGAGAAAGCAGAAATTTGGGTACT TCTTATCACAGGTATTAGAGCTACATCTCACAGATATCTTTATTCTTTCCTTTAACTTGAATTCGGTGTCAAATCCTAAT GAAAACAGTTTTTCCTTTTCTTTCTTTCTTTGTTGCTGAGTCTCCAAATATGTCTGTGTGAAGAAGGTGTTGCCGTTCTA AGATGTAATACTCCTAAAGCATTTCATATGCCATTTTTTTTTGTAGTTTTAGATCAAGTATGGGTGCAGGCAAAAAATTC ACTTATCGAAGCTTATCTACTAAACAAAGCATTGGATAAGCTTCAATAAGTGCCTTTTGTTGGTCTACATCCAAACAAGC TCTTAATTCTCATGGAAGTGATACCAAATATCAATTATCTATCCATGGTGAAACAAAAAATTTCAAGAATAACATAATAG AAAGCAAGGTGACTTAAGAGCCTAGCTTTATAAGGAACAAGGAAAAGTGGGCACTTTTCTGAGGCCAGTGTGTAAGAAGT TGTAGGAGTAGGAGATGATGACCACTGTTAAGGTCCTCATGGCTAATGCCTCCATAATGCTTCTGTCATCATACAATCTC AGACCCACATTTTAATTAGTTGGTTCCAACTTGCCTAAATCTATATTTTATGTTACATGCTGCTCCTATGTCTTTGATTG CACATTTGAAAATTTCAATGCAAATTCTACTTGTCACCCCTCTCTCCACTTTTTGTTCCTAAAGTGAAACAAGCTAGAAA CTTTCCTATATATTGCCTGCATCCAGGCCCCAAAAAGGGCAGAGACAGAATCTTGCAGGATAATGCCAGCTTATTATCAT GATTCTGATCCTGTTCAATCTTCATTTCAGTCTCTTGCCATGAAACTGAATGTGGTATCAGGTATATATGGTTAATCTAC CAGTTAGCTAGGGTCTCAACAATAGGTAAAGCCTGAGTTTCCAGTTTCTGTTAATCTTTTATGTTTTTGGTCAAACTTAA ATTTGTCTTCACCTTCACACTGTAGCTTGAGAGGTCATAAGTACTCCATCAATTAGCATTAAAAAAAATTACGAACATGC TTTTTCTTTTACTCTTACAGAATGTAGAAGTTGGTTGTATGATGATAGCAAGAGAAAAAATAAAAAAAATTCATTTTCTT TTTAGGAATGGTAACCAAAACTGAATATTCCATAAATCTTCTAGCAAATAACTTAGCTGGGGTGGAGTGGATGCCTGGGA GCATTATCAGAGCAAAGGACAGCTAACCTATCACTGTCACAGGACTGCAACAACGACAACAAGAACAAAAGCCTCATCCC CCTAAGTGAGGTCGGCTATATGGATCACACGACGCCCTTGCGCTCGATCAAAATCCAAATTTTGTCACAGGATTGGAATC AATAAATTGCAAGGTCCCATGGATGAGAGAAACAATATAGAATCCATCAAGAAGACAATGCAGAGGCATGAGGACATCTT TAAACACCAGGTATCCTCAAGATGTGGTATGATACTATGATTGAACTTCCCATCTTAGCAAATACAAAATTCAGGTTACC ATTCAATTTGTTTCTCACATGTTACATTACATGAAAACAATAATCACAGGGTCAAGCAGGTGCCCTATTAGGCTTTTATC AGCTTTAAGTTCATGAGTATTATAAGGAGAGGCTTTCCATTGCCGTTATCTTTGATTCTCTTTGGAGGCCACACTATGCT TCATTCTGCATGTAAAGTGAAAATGGAACCATAATGCTTTCATAATGAACATACTGATTCAGAACTTTATAAAGTTACTC ATTCTTTGACATCATATATGTGGCCATGTTTATATCATTCTATGACTATGACCTTTATAAATTATTTGTTAACAAGTCCA AGCAGTCACACATGTGAAACATCAGTCCCAATCCTGTGTTAAGAAGCATTATGATCTGCAATCTTTAACTGGTTAGCAAT TATGAGAATATGGACTTTGCAGGTAAGAGAACTACACAGGGTATACAGTGTGCAAAAGATGCTGATGGATGAGCTCAAAG GAGAAATTAGACAACAGAGAATTTGGAACCCCATGAGTGTCATAAATGTTAGCCATCCTCATTCAATTGAACACCAACAT CAAACAACACAATTTTCTTTCCATGTTCATAGATTGAGAGAGGATCTAGGCTCAAGAGAAAGGAGTGGAAGTGACTCTGG AGAGACCAACAAAATGGAAAGAGGTTTTGATTTGGAAAAGCCTGCTGAAGAAGATAATTTTACTGGAGTTTGTGGTTTTG AAGAAGGTGATGCAGGACCTAGCTCTCATAATGCATTTCAGAGTAGTAAAATAAGTGCTTGTGGCTCAGATGAAGATATG GAAGTGGATTTGACACTAAGCATAGGAGGAAGCATGGTTAAGAACTCTCATCTTTCTCAATTAGACTCACCAAATGGGAA AACTAGAGAGCTAAATTCAAGTGCCTCCTTCAAATCAGACCTTAGATCAGATAGAGTAGGAGAATGCAGTGACACAACCA CCCCCATTAGTAGCTCCAATGTGAAATTGACTCAGGAAAAGAAAGGGGAACATTGGCTTTCAAAAGGTCTACAGCTTAAA TAACATTTTAACTTGTTTGTTTGTAATTGTATCCTTTCATCTATACATTGACCACAGAATTTTGATGGGTCATGTATTCA CATTCCTAGATTAATTTCCACTTTATTCCAATAAATGAAATAGTTTATACACTCTTCTGGGTGTCTTTTCTGCTGATGAC TTTATGGTCAATTAATAATCAGTATTCATGTAATATTGAAGATTCAG
CDS sequence (LotjaGi4g1v0303200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAATATGGACTTTGCAGGTAAGAGAACTACACAGGGTATACAGTGTGCAAAAGATGCTGATGGATGAGCTCAAAGG AGAAATTAGACAACAGAGAATTTGGAACCCCATGAGTGTCATAAATGTTAGCCATCCTCATTCAATTGAACACCAACATC AAACAACACAATTTTCTTTCCATGTTCATAGATTGAGAGAGGATCTAGGCTCAAGAGAAAGGAGTGGAAGTGACTCTGGA GAGACCAACAAAATGGAAAGAGGTTTTGATTTGGAAAAGCCTGCTGAAGAAGATAATTTTACTGGAGTTTGTGGTTTTGA AGAAGGTGATGCAGGACCTAGCTCTCATAATGCATTTCAGAGTAGTAAAATAAGTGCTTGTGGCTCAGATGAAGATATGG AAGTGGATTTGACACTAAGCATAGGAGGAAGCATGGTTAAGAACTCTCATCTTTCTCAATTAGACTCACCAAATGGGAAA ACTAGAGAGCTAAATTCAAGTGCCTCCTTCAAATCAGACCTTAGATCAGATAGAGTAGGAGAATGCAGTGACACAACCAC CCCCATTAGTAGCTCCAATGTGAAATTGACTCAGGAAAAGAAAGGGGAACATTGGCTTTCAAAAGGTCTACAGCTTAAAT AA
Protein sequence (LotjaGi4g1v0303200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIWTLQVRELHRVYSVQKMLMDELKGEIRQQRIWNPMSVINVSHPHSIEHQHQTTQFSFHVHRLREDLGSRERSGSDSG ETNKMERGFDLEKPAEEDNFTGVCGFEEGDAGPSSHNAFQSSKISACGSDEDMEVDLTLSIGGSMVKNSHLSQLDSPNGK TRELNSSASFKSDLRSDRVGECSDTTTPISSSNVKLTQEKKGEHWLSKGLQLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 212 | 210 | 1.5E-72 | – | |
| PANTHER | 3 | 212 | 210 | 1.5E-72 | – | |
| MobiDBLite | 68 | 89 | 22 | - | – | |
| MobiDBLite | 150 | 173 | 24 | - | – | |
| MobiDBLite | 150 | 213 | 64 | - | – | |
| MobiDBLite | 181 | 196 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0303200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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