Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0303200 |
| Transcript ID | LotjaGi4g1v0303200.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | A-kinase anchor protein 9, putative isoform 1; TAIR: AT5G57340.1 ras guanine nucleotide exchange factor Q-like protein; Swiss-Prot: sp|P06105|SC160_YEAST Protein SCP160; TrEMBL-Plants: tr|I1LVP2|I1LVP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0303200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67845013..67848186) extracted from Lotus japonicus Gifu genome v1.2.
ATATCACATAGTCACTCACTCATTCATATGAGACACATTGCTACTCCAGCTTTTCTCTTGCCTCCTTCCCTCACAGCCTG TCAAGCCTGAATTATTAACTAACCCCTTGATTATAGTTTTAAATTTGAGCTGTTTCCTTTGTTGTTTCCTAGTAAAGGGT TGATTAATGTTTCTTACCTGTCAAGAGATTTGGTGCTGTCTATGAGCTTTCTCCAGATTCCCCAGGTGGTACTGCACTGT TTGGATTGATCCATCCTCTGTCTTGGAAATGATTCAAGGAGAATCATGAGAGCATTGTTCTCTTTTAATATTAGTATTGG TCCAATGAGTAAGGCTGACTCATGCATAGATGCTGGCATGAAGGAGTGTTCAATGTCCCTCATAAGAGAAAGCAGAAATT TGGGTACTTCTTATCACAGGTATTAGAGCTACATCTCACAGATATCTTTATTCTTTCCTTTAACTTGAATTCGGTGTCAA ATCCTAATGAAAACAGTTTTTCCTTTTCTTTCTTTCTTTGTTGCTGAGTCTCCAAATATGTCTGTGTGAAGAAGGTGTTG CCGTTCTAAGATGTAATACTCCTAAAGCATTTCATATGCCATTTTTTTTTGTAGTTTTAGATCAAGTATGGGTGCAGGCA AAAAATTCACTTATCGAAGCTTATCTACTAAACAAAGCATTGGATAAGCTTCAATAAGTGCCTTTTGTTGGTCTACATCC AAACAAGCTCTTAATTCTCATGGAAGTGATACCAAATATCAATTATCTATCCATGGTGAAACAAAAAATTTCAAGAATAA CATAATAGAAAGCAAGGTGACTTAAGAGCCTAGCTTTATAAGGAACAAGGAAAAGTGGGCACTTTTCTGAGGCCAGTGTG TAAGAAGTTGTAGGAGTAGGAGATGATGACCACTGTTAAGGTCCTCATGGCTAATGCCTCCATAATGCTTCTGTCATCAT ACAATCTCAGACCCACATTTTAATTAGTTGGTTCCAACTTGCCTAAATCTATATTTTATGTTACATGCTGCTCCTATGTC TTTGATTGCACATTTGAAAATTTCAATGCAAATTCTACTTGTCACCCCTCTCTCCACTTTTTGTTCCTAAAGTGAAACAA GCTAGAAACTTTCCTATATATTGCCTGCATCCAGGCCCCAAAAAGGGCAGAGACAGAATCTTGCAGGATAATGCCAGCTT ATTATCATGATTCTGATCCTGTTCAATCTTCATTTCAGTCTCTTGCCATGAAACTGAATGTGGTATCAGGTATATATGGT TAATCTACCAGTTAGCTAGGGTCTCAACAATAGGTAAAGCCTGAGTTTCCAGTTTCTGTTAATCTTTTATGTTTTTGGTC AAACTTAAATTTGTCTTCACCTTCACACTGTAGCTTGAGAGGTCATAAGTACTCCATCAATTAGCATTAAAAAAAATTAC GAACATGCTTTTTCTTTTACTCTTACAGAATGTAGAAGTTGGTTGTATGATGATAGCAAGAGAAAAAATAAAAAAAATTC ATTTTCTTTTTAGGAATGGTAACCAAAACTGAATATTCCATAAATCTTCTAGCAAATAACTTAGCTGGGGTGGAGTGGAT GCCTGGGAGCATTATCAGAGCAAAGGACAGCTAACCTATCACTGTCACAGGACTGCAACAACGACAACAAGAACAAAAGC CTCATCCCCCTAAGTGAGGTCGGCTATATGGATCACACGACGCCCTTGCGCTCGATCAAAATCCAAATTTTGTCACAGGA TTGGAATCAATAAATTGCAAGGTCCCATGGATGAGAGAAACAATATAGAATCCATCAAGAAGACAATGCAGAGGCATGAG GACATCTTTAAACACCAGGTATCCTCAAGATGTGGTATGATACTATGATTGAACTTCCCATCTTAGCAAATACAAAATTC AGGTTACCATTCAATTTGTTTCTCACATGTTACATTACATGAAAACAATAATCACAGGGTCAAGCAGGTGCCCTATTAGG CTTTTATCAGCTTTAAGTTCATGAGTATTATAAGGAGAGGCTTTCCATTGCCGTTATCTTTGATTCTCTTTGGAGGCCAC ACTATGCTTCATTCTGCATGTAAAGTGAAAATGGAACCATAATGCTTTCATAATGAACATACTGATTCAGAACTTTATAA AGTTACTCATTCTTTGACATCATATATGTGGCCATGTTTATATCATTCTATGACTATGACCTTTATAAATTATTTGTTAA CAAGTCCAAGCAGTCACACATGTGAAACATCAGTCCCAATCCTGTGTTAAGAAGCATTATGATCTGCAATCTTTAACTGG TTAGCAATTATGAGAATATGGACTTTGCAGGTAAGAGAACTACACAGGGTATACAGTGTGCAAAAGATGCTGATGGATGA GCTCAAAGGAGAAATTAGACAACAGAGAATTTGGAACCCCATGAGTGTCATAAATGTTAGCCATCCTCATTCAATTGAAC ACCAACATCAAACAACACAATTTTCTTTCCATGTTCATAGATTGAGAGAGGATCTAGGCTCAAGAGAAAGGAGTGGAAGT GACTCTGGAGAGACCAACAAAATGGAAAGAGGTTTTGATTTGGAAAAGCCTGCTGAAGAAGATAATTTTACTGGAGTTTG TGGTTTTGAAGAAGGTGATGCAGGACCTAGCTCTCATAATGCATTTCAGAGTAGTAAAATAAGTGCTTGTGGCTCAGATG AAGATATGGAAGTGGATTTGACACTAAGCATAGGAGGAAGCATGGTTAAGAACTCTCATCTTTCTCAATTAGACTCACCA AATGGGAAAACTAGAGAGCTAAATTCAAGTGCCTCCTTCAAATCAGACCTTAGATCAGATAGAGTAGGAGAATGCAGTGA CACAACCACCCCCATTAGTAGCTCCAATGTGAAATTGACTCAGGAAAAGAAAGGGGAACATTGGCTTTCAAAAGGTCTAC AGCTTAAATAACATTTTAACTTGTTTGTTTGTAATTGTATCCTTTCATCTATACATTGACCACAGAATTTTGATGGGTCA TGTATTCACATTCCTAGATTAATTTCCACTTTATTCCAATAAATGAAATAGTTTATACACTCTTCTGGGTGTCTTTTCTG CTGATGACTTTATGGTCAATTAATAATCAGTATTCATGTAATATTGAAGATTCA
CDS sequence (LotjaGi4g1v0303200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAGAGAAACAATATAGAATCCATCAAGAAGACAATGCAGAGGCATGAGGACATCTTTAAACACCAGGTAAGAGA ACTACACAGGGTATACAGTGTGCAAAAGATGCTGATGGATGAGCTCAAAGGAGAAATTAGACAACAGAGAATTTGGAACC CCATGAGTGTCATAAATGTTAGCCATCCTCATTCAATTGAACACCAACATCAAACAACACAATTTTCTTTCCATGTTCAT AGATTGAGAGAGGATCTAGGCTCAAGAGAAAGGAGTGGAAGTGACTCTGGAGAGACCAACAAAATGGAAAGAGGTTTTGA TTTGGAAAAGCCTGCTGAAGAAGATAATTTTACTGGAGTTTGTGGTTTTGAAGAAGGTGATGCAGGACCTAGCTCTCATA ATGCATTTCAGAGTAGTAAAATAAGTGCTTGTGGCTCAGATGAAGATATGGAAGTGGATTTGACACTAAGCATAGGAGGA AGCATGGTTAAGAACTCTCATCTTTCTCAATTAGACTCACCAAATGGGAAAACTAGAGAGCTAAATTCAAGTGCCTCCTT CAAATCAGACCTTAGATCAGATAGAGTAGGAGAATGCAGTGACACAACCACCCCCATTAGTAGCTCCAATGTGAAATTGA CTCAGGAAAAGAAAGGGGAACATTGGCTTTCAAAAGGTCTACAGCTTAAATAA
Protein sequence (LotjaGi4g1v0303200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDERNNIESIKKTMQRHEDIFKHQVRELHRVYSVQKMLMDELKGEIRQQRIWNPMSVINVSHPHSIEHQHQTTQFSFHVH RLREDLGSRERSGSDSGETNKMERGFDLEKPAEEDNFTGVCGFEEGDAGPSSHNAFQSSKISACGSDEDMEVDLTLSIGG SMVKNSHLSQLDSPNGKTRELNSSASFKSDLRSDRVGECSDTTTPISSSNVKLTQEKKGEHWLSKGLQLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 229 | 228 | 7.4E-84 | – | |
| PANTHER | 2 | 229 | 228 | 7.4E-84 | – | |
| MobiDBLite | 85 | 110 | 26 | - | – | |
| MobiDBLite | 167 | 230 | 64 | - | – | |
| MobiDBLite | 167 | 190 | 24 | - | – | |
| MobiDBLite | 198 | 213 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0303200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…