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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0305000 |
| Transcript ID | LotjaGi4g1v0305000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF4228 domain protein; TAIR: AT1G21010.1 poly polymerase; Swiss-Prot: sp|Q892X1|PUR5_CLOTE Phosphoribosylformylglycinamidine cyclo-ligase; TrEMBL-Plants: tr|G7JUB6|G7JUB6_MEDTR DUF4228 domain protein; Found in the gene: LotjaGi4g1v0305000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68044959..68046897) extracted from Lotus japonicus Gifu genome v1.2.
ATTTAAAACAAAATAACTATCTCAAATGATCAATAGTCAACCCCCATTTGTGTATTCTAAACACACTATAACATCATTGC TAATAAATACAGGACCAGAGGCATCAGAATATTCAGTATTCACCACTACTTTTTCATTTAGCATCTATTCAATTCCAAGT GAGAAGCACGAAAATGGGTGCCTGTTTATCTCTTAAGTCATCTTCCACCTTCAAGAATGTGCGAGTGGTTCATCTCAATG GTTATGTAGAGTATTTTGAGCAACCCATTTCAGCAAGCCAAGTAATTGACACCCCCGAAAAACACTTTGTTTGCACCTCC TTTCAGCTTCTTTCCTCAACACCATTCAAGGGAGATACCCAACTCCAACTTGGGCAAGTGTATTTCATGCTCCCATACTC AATGTTCCAAACTGAGTTTTCCCCTATGGATTTGGCTTGCCTAGCAAAGAGGCTCACTGCAATAGCCAAAACCAGGTCAT GTAATTCTGACTCAAAAAAACTCAGGAGTCCTTGCAGAGTCGCCGTGGCTGAGAAAGTTGGTGTGAATATGATGAATGGG GGACGAAGCCCTTGTAGGTTGAAAACATGGAAACCTGTCTTGGACACTATCACAGAAAAGTCATTCCATAGCAATAGGAG TTGTGAATCAGTTTTGTATGAGAAAAATTAATTCTCATGTCCTGTACTCATGAATGTCCTCAAGGACTTCATAATACTAT TAATTGTTAGGCATTTGGATATTACAGATTTCATATCCAAATCTTATGAAAAAAATGTAAATAAGGTACGCTTTTTGCTT AGTTAGTTCTTTGTATTTTTTTGTTATGCAACCTTCTTGTTTTTGGAAGTGTATTAGATCATTAGATGTTTTCAAGGCAG ACAGATCAGAAGGAAGTTCAGTTTGTGAAATACTTAATTAATTTTTCTTGTTTGGGCTACTATAAAAAATAGCATATACT CAAGTTAGGACAGCAAAGAATTGAATAACTTTTAATGTATTTTAACAACTAAAGAATGACAATTTGGCTGTCCAGATTGA AGAACTCGAGAAATGGTTGGAGTTTGGTGGCCAAAGTTGTCTACTAGGATTTACGGCTATGTTTGGATATTCTTGTGTTA GTGCAAATGCAAATTGACGTTAACTCTCACTTACAAAAAGTAAGCAAAATATTTTGATAAAAATTTGTTTACGTTGCATT CAACTAGTATCAAAGCGGATTACCATGATGGCTCTGCTAGGGTTTTAGCGCCTCTTTCTGACGGCTAGGGTTTCTGGGCT TTGACTTCCAAATTCTGGCTCGGGATCCTAGGGAAGACTTTGACGGCACGACTTGTCTCGTGTTCCTCTACGAGTAGACT TTCTTCTCATCTGTGGGAAGATTCTCTTCTGGTACTCAACGTGAAGTTTTGATCGTGTTTCTTTTTCTGGCTTTCATGCA CATCACCGCCCATCAATGGCTGATATCCCTGAGTTTGATATGAATGAGGAGGAAGGAGAGGCCCTCGATTTGGGAATTCT GGGTGAGGATCCGGCTCTGAGACAAGACGTATGGCTTACAGCAAGGGTTCATGCCAGAAATCAAGTTAGCTCTCAGGCTT TCAAAACTGTCATATCTGCTTTGTGGAAATCACGAAACTGCGAGGAGGTGCACCAGGCAGGAGTGAATCTCTTCACGTTC AAGTTTACCTCTGCTAGGGACAAGGACCTAGTCCTCCGTTCGGGGCCCTGGTTCTTTAACCGGTACGCACTGGTGCTGCA ACTGATGAATGGGGTGGTTGCCCAACCACCGATTCCCCTTGGTGGTATCCCTTTCTGGATACAGGTTAACAATCTTCCTC CGGGGGGATTCAGGACAGAGGCGGTGGCACGTCTTATTGCAAGAACCTTTGCAGGATACATAGAGTGGGACAAATCAGAG GCGAACAAGTACGAACCAC
CDS sequence (LotjaGi4g1v0305000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGCCTGTTTATCTCTTAAGTCATCTTCCACCTTCAAGAATGTGCGAGTGGTTCATCTCAATGGTTATGTAGAGTA TTTTGAGCAACCCATTTCAGCAAGCCAAGTAATTGACACCCCCGAAAAACACTTTGTTTGCACCTCCTTTCAGCTTCTTT CCTCAACACCATTCAAGGGAGATACCCAACTCCAACTTGGGCAAGTGTATTTCATGCTCCCATACTCAATGTTCCAAACT GAGTTTTCCCCTATGGATTTGGCTTGCCTAGCAAAGAGGCTCACTGCAATAGCCAAAACCAGGTCATGTAATTCTGACTC AAAAAAACTCAGGAGTCCTTGCAGAGTCGCCGTGGCTGAGAAAGTTGGTGTGAATATGATGAATGGGGGACGAAGCCCTT GTAGGTTGAAAACATGGAAACCTGTCTTGGACACTATCACAGAAAAGTCATTCCATAGCAATAGGAGTTGTGAATCAGTT TTGTATGAGAAAAATTAA
Protein sequence (LotjaGi4g1v0305000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGACLSLKSSSTFKNVRVVHLNGYVEYFEQPISASQVIDTPEKHFVCTSFQLLSSTPFKGDTQLQLGQVYFMLPYSMFQT EFSPMDLACLAKRLTAIAKTRSCNSDSKKLRSPCRVAVAEKVGVNMMNGGRSPCRLKTWKPVLDTITEKSFHSNRSCESV LYEKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 154 | 154 | 1.1E-48 | – | |
| PANTHER | 1 | 154 | 154 | 1.1E-48 | – | |
| Pfam | 1 | 148 | 148 | 1.1E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0305000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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