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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0307400 |
| Transcript ID | LotjaGi4g1v0307400.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleotide-sugar transporter family protein; TAIR: AT5G57100.1 Nucleotide/sugar transporter family protein; Swiss-Prot: sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890; TrEMBL-Plants: tr|A0A151SCQ3|A0A151SCQ3_CAJCA Putative membrane protein family; Found in the gene: LotjaGi4g1v0307400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68315007..68320626) extracted from Lotus japonicus Gifu genome v1.2.
GGCAATCATAAGACGATAGTTTATGAATACGACATCGTTTGAGTGGCAATCATAAGACGACAGAAGAAACGAGGTTTTGT TTGGGAGCGGTGTGTCGCAATGAATGATGTTTGATTTTCCGAAATCAGCGGCATAATCCACGTGTCCAATCTGATGATGT CCCACCCTTTCCCTTTTCTCTCTCAATTTCACTCACACATGACACAACACAAACCCACCCAGTGCCACCAGACACCAGTG GTGCTAGCTAGCTCTTCTTACTCAGCCTCCTCCTCCTCCTTTGTTAGTTAGATAGAGCACACCCTCTTCATTTCTTCCCA AAATGTTTAATTTCTTAATGAGTAAACAGGTCCGAAAGATTCTCAAGCGCAAAGACAGTGATGCTGGTCAAACAGGTAAT GCAATGTTAGATTTCCACAATGTGGCTTCCAATATTCCTCATCATCCTTATTACATTGTCTACTGCAACTTTATTTTCTG TGATGATTGGGAGTGAACACATGTGAAATCAATTTAGGATTTCCCAAACAATTTTATCCTTTTTTAGGTTTCTATTATCC GCAGCTCCTTAATATACCTATGTATTTGTGTCTGTCAGTCTTTATTGCAAACTTCTATCAATGCCTTGCAGTTTTGATAT TTTTTCAATTCATTTGTATTTGACTCTTAGTGTTCATGATTTATTTATTCTTTTACTATTTGGAGAGTTTGTTTATCAAG CCATTTAAGGCACATGCGGAGAAATTTGGTTATAGCACCAGTTAGGAATGTGAATCAGATGAAGGCCTGTCCAATAGGGA AAATTGGTTATAGCACCAGTTAGGGCAGGGGTGTCAAATCATTAAGAAGGATTTGCATTTTAATGATCTATTTTTAGACA TGATTGATGATACATTGTTTAAATCATGTTGCAAACCCAATAGTGGAAACAAACTGCGGTTGTTATTGTTGAATTTCAAA TTTTTACTATAGAGCTGGTTTCTTATGTATTCTAGAATTTGGGCCTGTATTTTATATGCTTAATTGCTTACCATAAACTT GGCAATCTTTATTCATATTCATTTCTTATTGATTCACCTCTGAATTGGAATTTGTCCTTTGCAATGATTGATATAAGAAT GTCAATCTAGGGCATATTGACGTTTTTCTATAGTGAATAGACTATATTTCTATAAGAAAAATTCACTAATATCTTCCATT ACCTTTCACTGCACAGGAAAAGCATTGGAAGACTTGAGAGGCTCTCTGTTCAATGAATTTCGTACCGTTGAAGGTGCAAA ACGTCAACAACAGCGTACGTGTGGTCCAGCTGCAGCACTTTCCTTCAATTTTCTGGTTGCAGTTGGTATTATTTTCATGA ACAAAATGGTTCGTTCACTCTCTTTCTTTCTATCTGGTGTAGCTATGTTTTGTGTTGAAATTTCAAAGTACTATGGTTTT TATGCAGATTTAATTGACTTCATCTTTTTCGTTGTTTCTTTCAGGTGCTTCAAACTGTCAAATTCAAATTCCCGATATTT CTCTCACTAATTCACTATGTTGTGAGCTGGTTCTTAATGGCTCTACTAAATGCATTTTCTTTCCTCCCTGCATCTCCTTC CTCAAAAACTCCGCTGTCTGCTTTATTTACTCTTGGATTTGTTATGTCTCTATCTACTGGCCTTGCTAATGTCAGCTTGA AGTATAATAGGTAGGTAATTCAACTATCAATATTTTTATTTTGAAGTATTCTTTTAATACTCTTAATTCAATATTAATTC AATATCTATATCTGCAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTAACACCTTCAATAGTTATGGCAGAATTTGT TTTGTACCGGAAGAAAGTTTCTTGGCCGAAGGTAAATGCATTCACTTTGACTGTCTCGCAAACCCTCAGAAGAAAATTGA AAAATTGATTGAAATAAATGAAGAAAAGAAGAATTTTATTGAATGATAGAGAATAGGAGAAGTGTCTACTCCTAGGGTTT CCCCTTCAACAAAGGATTTACCCTTTCATTTGAACTTTCCAAATTCACACAATGAGTCCTCTCTACTATGTGTCCTTATT TACCTAGTTAAGTCTCCTCTAACTGAATAACTACCCTAACTAATCCTTATTACTACTCCTCTTTACATAAGGGGTTTTAG AATGAGCTAATCTGAAAAACGTGCACATTTTGTTCTATCATCTATGAACTCCTGTGAGCATACATTGTTTTGACCTCAAA CAGTATGCATGGAATAATTAATCCCAGATTTGTATTATGAGGTTAAGTGCATGACCAAATTATGAAGTAAGCATGTCTCT TGAACACCCTCGTGAGTCAAGATACCTCAATTACTCCTTTATGTTTGCGGAAGCTCACTGAATGCCTTGGTAGACTTAAA GTGATTAGACCAATAAATTAGTTCAAACTCAAAATTCTAGTTAACCAAAAGGCTCTAGTCACTTTGTGTCTAGGACTATA ATTTTAGTATTTAACTATTTATGATTGTGTATTAATTTAGTGATTTATGCCAGTCAAATATCATTGTTTGAATTAGTCAG CCTTCTTTCTCTGGACACAATGAGTTGTGTGTTCTGTATTTCATATATGAATTTCAGTTATTTTCTGTAGGAATTTCTAA AATTGTTCATAAGAGATGGATTTCAGTCAGTTAATATAGCTATGGATATGTTATCTTAAAAACATCAATTAATAAAGTCC CAACTTTTAGAGCATTATAGATATGCTTATCCAATTTTAGATTGAAATGCTTACTATAGGAATGGCAACTCTACAGGCTA TTGCATTAACGGTCGTATCTATTGGTGTTGCTGTGGCTACAGTGACTGACCTGCAGTTCCATGTGTTTGGTGCCTTTGTA GCACTGGCGTGGATTGTACCTAGTGCTGCTAACAAAATCCTCTGGTCCCGACTGCAGCAGCAAGAGAACTGGACAGCTTT GGCGTAAGTAATTCATTCATTTATTCTTTAGGCCAGTTTAGGGTTAAAGGAGGAAGATTGTGTGTTAGTCTATGGCAACA GACATAAAACTAGCCTTATTTTTAATATGGATCAAGTGATCCATATAGCCGAACTGACTTAGTGAGATAAAAGTTGTTAT TGTTTATAATACTGTTAACCCTGGCCTCCCCTCTCAATTTTCAGCGGTGATTCGCATACAAAGTTGCTTTCTCTTTCTTG CCTAATTTTTTGATTGATCAACAGGTTGATGTGGAAAACAACACCTATTACTTTAATTTTCCTGGTTGCTATGTTACCCT ACTTAGACCCTCCAGGTGTACTATCCTTTGATTGGAACTTCAACAACACACTGGTGATTCTTATATCTGCTATTCTTGGA TTTTTGCTTCAATGGTCTGGTGCTTTAGCACTGGGGTGAGTTACATGCATTATTCTTCTTTTAATTATTGAATGATTTTT CTGTAAAAATAATTCCAATTTCAGTTTCTGGTAGAATGGTGTAGGAACCACTTGTTTAATATTTCTAGGTTGTTTTAAAC ACATAATCAAATTTAGTGTTGATTCAACGATGGCTTGACTTCCAATGTGCCAAACATGAACGAGGTCACTTGTTTTTTTT CCCGCTTGCTTTATGATAGTACTTAATGACGAGTGCGAAAAATGTAAGTCACATTTTCTGCTTCCTTAATGGTGAATCAG TGGTTCACTGTTGAAGAGGAATATGCTTTATTTCAGTTGACAAAGGTGGACCGAGAAGCCTGTGGCCGCATTTGATTCCA TCTTTGTTTCTTTTGTTCTCATAGTTCCTGATCTTTTATTATTTTAGTTTTTCTCTATTTTTCCAAATTTTTTGTTGTTT TAGAAATCTAAGACCATTTATCACTTTTTATTTCAATGATAGTGTATACCCTCATTTACTAGTTTAAGAAATTTATTGAA ATTAGTTGAAAATAGGTTATAAGTAAGCATAAGCTCTTCTCCATAAGCTATTCTGACCAACTTATGAAAATTAGCTCAAA CCATCTTATAGGTAGGCCATAAGCTATCCCAAACACTTGCATAAGCGCTAATACTATCATTCTCTTTTTAACATATTTCA CTTAAATAAGTGTGTTTTAGTCAAGTTCATATCAATTAAAAAGCTCTTAAACTATGTGCATGACCTCAAACAACAAAAGA TGAGGAATGGAGGTAGTAGCATTTCAATTTCAAGGAGGGTCCAGATCACTCTTATTATGAATTATGGGCTACTTATATGC TTTGTTTTAAACAATTACATATGTTTTTTTGCGCCTTTGGCTTATTTATCCGTATTCCTGTAAAGACTTGATAAATTCAG ATTTGGCTAGATATTTTTGTAGAAGTCACATATTATTCTAATTTCCTTCCAACATCAATGATATCCATGAACTTCAAAAT TCTGAAGTTGTATTTTTTAGTGACAAACCACCCAACTAACCAATCCTCTTAAAAAATACTAAAAGAGTGATCCTCCTTGT ATGAGAATTTCGAAAACAGTTTGTATATATTGCATAGTGTAATGGTTATGTGCTAATACTGATGGTGCTCTCTATGTCCA GACTTCAGACGCACTAGTGAATAAGTGTGACATGTTTGTGACATTAATGACAGATCTTTTAAAGACTGTTCTAACATATT GTTTGCCAATGCCAGATATTCACTGATGTTCATTAATTGTTTTTTTTTCGTTGCTGTTTCTATATTACTGTTTTAAACAT GCAGTATAATGCATTGTTTCTACCTGGTTTCTTCTTATATTTTCTTGGTCATGAAATTTACAGTGCTACGTCCGCCATCT CGCATGCTGTTCTTGGGCAATTTAAGACGTGTGTACTCCTCCTGGGAAACTATTATCTTTTTGGGTCGAATCCCGGCATA ATCAGTATCTGTGGAGCAGTTACAGCCATTACCGGCATGTCTGTTTATACTTGTCTTAATCTGAAGCAGCAATCAAACAA GATATTTCCTCAACAGGTCTCCCATGTAGCAAAATCTAAACTTAGCAAAGAAAATGGCAGTTCCCAAAATGGACATTACG GTGCAGAATCCGTCTAACAAATTAACTTAGCAGTGCATTACATGAAGCATTTTTTATCCATGCTTTCTGTGGTTTCTAGA TTCTGATATAACTTATCATTTCGGGTGTTAATAGTGAATTTGTCAATTATGATGTATTGTTTAACTTTTACTAGGGCTTA CATGATTCTCTTACTCGAGGTAACTGCTGCTCGAGTTGGAATCCCATCTGTAAATGAATGATTTGGTGGATTCTTCTCGA GAGTTATGGTTTTCTCTGACTTTTAGACTTAGAGCAGGAGCTGCTTTTGCATTTTGTAGTTTCAATAGAAACATACTTTT ATCTTGGGGAAATAGGGTTGATTTCAATTTTATTTGTTGTATGAATAGAATTGTTGGCTTGAAGTGTGGACAATGTGGAA GTTCAGCTGTCTTCTATTGAAATTCAAGTATATTGATGTTCAATTGTGACACAATTTTCAATGTCTTTGTCACCATATAT TAGGATATATCATTGAAAACTTTGATATCTTGAATAATAGATATGAACTTTCAGATGTTTCTTTAAAGATTAACTTTCTC TACTAATAGTTTTTTTCCTT
CDS sequence (LotjaGi4g1v0307400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTAATTTCTTAATGAGTAAACAGGTCCGAAAGATTCTCAAGCGCAAAGACAGTGATGCTGGTCAAACAGGAAAAGC ATTGGAAGACTTGAGAGGCTCTCTGTTCAATGAATTTCGTACCGTTGAAGGTGCAAAACGTCAACAACAGCGTACGTGTG GTCCAGCTGCAGCACTTTCCTTCAATTTTCTGGTTGCAGTTGGTATTATTTTCATGAACAAAATGGTGCTTCAAACTGTC AAATTCAAATTCCCGATATTTCTCTCACTAATTCACTATGTTGTGAGCTGGTTCTTAATGGCTCTACTAAATGCATTTTC TTTCCTCCCTGCATCTCCTTCCTCAAAAACTCCGCTGTCTGCTTTATTTACTCTTGGATTTGTTATGTCTCTATCTACTG GCCTTGCTAATGTCAGCTTGAAGTATAATAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTAACACCTTCAATAGTT ATGGCAGAATTTGTTTTGTACCGGAAGAAAGTTTCTTGGCCGAAGGCTATTGCATTAACGGTCGTATCTATTGGTGTTGC TGTGGCTACAGTGACTGACCTGCAGTTCCATGTGTTTGGTGCCTTTGTAGCACTGGCGTGGATTGTACCTAGTGCTGCTA ACAAAATCCTCTGGTCCCGACTGCAGCAGCAAGAGAACTGGACAGCTTTGGCGTTGATGTGGAAAACAACACCTATTACT TTAATTTTCCTGGTTGCTATGTTACCCTACTTAGACCCTCCAGGTGTACTATCCTTTGATTGGAACTTCAACAACACACT GGTGATTCTTATATCTGCTATTCTTGGATTTTTGCTTCAATGGTCTGGTGCTTTAGCACTGGGTGCTACGTCCGCCATCT CGCATGCTGTTCTTGGGCAATTTAAGACGTGTGTACTCCTCCTGGGAAACTATTATCTTTTTGGGTCGAATCCCGGCATA ATCAGTATCTGTGGAGCAGTTACAGCCATTACCGGCATGTCTGTTTATACTTGTCTTAATCTGAAGCAGCAATCAAACAA GATATTTCCTCAACAGGTCTCCCATGTAGCAAAATCTAAACTTAGCAAAGAAAATGGCAGTTCCCAAAATGGACATTACG GTGCAGAATCCGTCTAA
Protein sequence (LotjaGi4g1v0307400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFNFLMSKQVRKILKRKDSDAGQTGKALEDLRGSLFNEFRTVEGAKRQQQRTCGPAAALSFNFLVAVGIIFMNKMVLQTV KFKFPIFLSLIHYVVSWFLMALLNAFSFLPASPSSKTPLSALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIV MAEFVLYRKKVSWPKAIALTVVSIGVAVATVTDLQFHVFGAFVALAWIVPSAANKILWSRLQQQENWTALALMWKTTPIT LIFLVAMLPYLDPPGVLSFDWNFNNTLVILISAILGFLLQWSGALALGATSAISHAVLGQFKTCVLLLGNYYLFGSNPGI ISICGAVTAITGMSVYTCLNLKQQSNKIFPQQVSHVAKSKLSKENGSSQNGHYGAESV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | - | – | |
| PANTHER | 8 | 368 | 361 | 1.5E-193 | – | |
| PANTHER | 8 | 368 | 361 | 1.5E-193 | – | |
| Phobius | 53 | 72 | 20 | - | – | |
| TMHMM | 55 | 77 | 23 | - | – | |
| Pfam | 63 | 336 | 274 | 1.9E-15 | ||
| Phobius | 73 | 83 | 11 | - | – | |
| Phobius | 84 | 109 | 26 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 110 | 120 | 11 | - | – | |
| TMHMM | 121 | 140 | 20 | - | – | |
| Phobius | 121 | 140 | 20 | - | – | |
| Phobius | 141 | 145 | 5 | - | – | |
| Phobius | 146 | 166 | 21 | - | – | |
| Phobius | 167 | 172 | 6 | - | – | |
| TMHMM | 171 | 191 | 21 | - | – | |
| Phobius | 173 | 192 | 20 | - | – | |
| Phobius | 193 | 197 | 5 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| Phobius | 198 | 218 | 21 | - | – | |
| Phobius | 219 | 229 | 11 | - | – | |
| TMHMM | 230 | 252 | 23 | - | – | |
| Phobius | 230 | 251 | 22 | - | – | |
| Phobius | 252 | 262 | 11 | - | – | |
| Phobius | 263 | 281 | 19 | - | – | |
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 282 | 292 | 11 | - | – | |
| Phobius | 293 | 314 | 22 | - | – | |
| TMHMM | 296 | 315 | 20 | - | – | |
| Phobius | 315 | 319 | 5 | - | – | |
| TMHMM | 319 | 341 | 23 | - | – | |
| Phobius | 320 | 339 | 20 | - | – | |
| Phobius | 340 | 378 | 39 | - | – | |
| MobiDBLite | 359 | 378 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0307400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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