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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0312800 |
| Transcript ID | LotjaGi4g1v0312800.2 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT1G02500.1 S-adenosylmethionine synthetase 1; Swiss-Prot: sp|P43280|METK1_SOLLC S-adenosylmethionine synthase 1; TrEMBL-Plants: tr|A0A097GX09|A0A097GX09_ROBPS S-adenosylmethionine synthase; Found in the gene: LotjaGi4g1v0312800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68956260..68957730) extracted from Lotus japonicus Gifu genome v1.2.
TGTGATTTGAGGGTTTTTAGCAAATTTTAGGGTTCTTCTTTGTTATGTGCATTGTTGGGAGATGTTACGTACCTGTATTT GGATTTTTCTCATTTTTTTACAATCTCTGAAATTCATGCATGATGGTGTTTTTGTTCTTGTGTATGAGTTTAGGTACTGG TTTGATTTGTGTTTGGATTTCAACTTGAGATACATGAAATCATGATTGTATTTGTTTGTATTTGCATCAATGTCAAACCA TACAAACATGCAGTTATTGTAGTTGAATTTTGGTTGTGTGATTCTGCAGATGGCGGCGGAGACTTTCCTATTCACTTCTG AGTCAGTGAACGAGGGGCACCCTGACAAGCTCTGTGACCAGATCTCTGATGCTGTGCTGGATGCATGCCTGGAGCAGGAC CCTGATAGCAAGGTTGCATGTGAGACTTGCACCAAGACCAACTTGGTCATGGTCTTTGGAGAGATCACCACCAAGGCCAT TGTTGACTATGAGAAAATTGTGCGTGACACCTGCAGGAAAATTGGGTTTGTTTCAGCTGATGTTGGACTTGATGCTGACA ACTGCAAGGTCCTTGTTTACATTGAGCAGCAGAGTCCTGATATTGCTCAGGGTGTGCATGGCCATTTGACCAAGAGGCCT GAGGAAATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCTACCGATGAGACCCCTGAGCTGATGCCTCTGAGCCA TGTCCTTGCTACCAAGCTTGGTGCTCGCCTAACTGAGGTTCGCAAGAATGGAACCTGCGCTTGGCTGAGACCTGATGGTA AGACCCAAGTCACTGTGGAGTATTACAATGACAATGGTGCTATGGTTCCTGTTCGCGTCCACACTGTTCTCATCTCAACC CAGCATGATGAGACTGTCACTAACGATGAAATTGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTGATTCCTGAGAA GTATCTTGATGAGAAGACCATCTTCCACCTGAACCCTTCTGGCCGTTTTGTCATTGGTGGTCCTCATGGTGATGCTGGTC TCACTGGGAGGAAGATCATCATTGACACTTATGGTGGATGGGGTGCTCATGGTGGTGGTGCTTTCTCAGGGAAGGACCCA ACTAAGGTTGATAGGAGTGGGGCTTACATTGTGAGGCAAGCTGCTAAGAGCATTGTTGCTGTTGGACTTGCAAGGAGGTG CCTTGTCCAGGTTTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTGTTTGTTGACACTTATGGTACTGGGAAGATCC CTGATAAGGAGATTCTGAAGATTGTGAAGGAGGAGTTTGATTTCAGGCCTGGTATGATCTCCATCAACCTTGATCTCAAG AGGGGTGGCAACAACAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGAAGGGATGATGCTGACTTCACATGGGAAGT GGTGAAGCCTCTGAAGTGGGAGAAGGCTTAA
CDS sequence (LotjaGi4g1v0312800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGGAGACTTTCCTATTCACTTCTGAGTCAGTGAACGAGGGGCACCCTGACAAGCTCTGTGACCAGATCTCTGA TGCTGTGCTGGATGCATGCCTGGAGCAGGACCCTGATAGCAAGGTTGCATGTGAGACTTGCACCAAGACCAACTTGGTCA TGGTCTTTGGAGAGATCACCACCAAGGCCATTGTTGACTATGAGAAAATTGTGCGTGACACCTGCAGGAAAATTGGGTTT GTTTCAGCTGATGTTGGACTTGATGCTGACAACTGCAAGGTCCTTGTTTACATTGAGCAGCAGAGTCCTGATATTGCTCA GGGTGTGCATGGCCATTTGACCAAGAGGCCTGAGGAAATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCTACCG ATGAGACCCCTGAGCTGATGCCTCTGAGCCATGTCCTTGCTACCAAGCTTGGTGCTCGCCTAACTGAGGTTCGCAAGAAT GGAACCTGCGCTTGGCTGAGACCTGATGGTAAGACCCAAGTCACTGTGGAGTATTACAATGACAATGGTGCTATGGTTCC TGTTCGCGTCCACACTGTTCTCATCTCAACCCAGCATGATGAGACTGTCACTAACGATGAAATTGCTGCTGATTTGAAAG AGCATGTGATCAAGCCTGTGATTCCTGAGAAGTATCTTGATGAGAAGACCATCTTCCACCTGAACCCTTCTGGCCGTTTT GTCATTGGTGGTCCTCATGGTGATGCTGGTCTCACTGGGAGGAAGATCATCATTGACACTTATGGTGGATGGGGTGCTCA TGGTGGTGGTGCTTTCTCAGGGAAGGACCCAACTAAGGTTGATAGGAGTGGGGCTTACATTGTGAGGCAAGCTGCTAAGA GCATTGTTGCTGTTGGACTTGCAAGGAGGTGCCTTGTCCAGGTTTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTG TTTGTTGACACTTATGGTACTGGGAAGATCCCTGATAAGGAGATTCTGAAGATTGTGAAGGAGGAGTTTGATTTCAGGCC TGGTATGATCTCCATCAACCTTGATCTCAAGAGGGGTGGCAACAACAGGTTCTTGAAGACTGCTGCTTATGGACATTTTG GAAGGGATGATGCTGACTTCACATGGGAAGTGGTGAAGCCTCTGAAGTGGGAGAAGGCTTAA
Protein sequence (LotjaGi4g1v0312800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRKIGF VSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN GTCAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF VIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAVGLARRCLVQVSYAIGVPEPLSV FVDTYGTGKIPDKEILKIVKEEFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKWEKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 393 | 393 | 2.2E-163 | ||
| PANTHER | 4 | 392 | 389 | 5.9E-273 | ||
| PANTHER | 4 | 392 | 389 | 5.9E-273 | – | |
| Hamap | 4 | 392 | 389 | 49.993 | ||
| SUPERFAMILY | 5 | 111 | 107 | 2.51E-47 | ||
| Pfam | 6 | 103 | 98 | 1.4E-42 | ||
| TIGRFAM | 7 | 388 | 382 | 6.0E-166 | ||
| CDD | 7 | 386 | 380 | 0.0 | – | |
| Gene3D | 7 | 242 | 236 | 4.1E-170 | – | |
| Gene3D | 13 | 279 | 267 | 4.1E-170 | – | |
| Gene3D | 104 | 384 | 281 | 4.1E-170 | – | |
| SUPERFAMILY | 117 | 241 | 125 | 3.83E-53 | ||
| Pfam | 119 | 240 | 122 | 1.9E-47 | ||
| ProSitePatterns | 121 | 131 | 11 | - | ||
| SUPERFAMILY | 242 | 390 | 149 | 2.51E-61 | ||
| Pfam | 242 | 383 | 142 | 7.1E-62 | ||
| ProSitePatterns | 268 | 276 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi4g1v0312800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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