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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0312800 |
| Transcript ID | LotjaGi4g1v0312800.3 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT1G02500.1 S-adenosylmethionine synthetase 1; Swiss-Prot: sp|P43280|METK1_SOLLC S-adenosylmethionine synthase 1; TrEMBL-Plants: tr|A0A097GX09|A0A097GX09_ROBPS S-adenosylmethionine synthase; Found in the gene: LotjaGi4g1v0312800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68956260..68957730) extracted from Lotus japonicus Gifu genome v1.2.
TGTGATTTGAGGGTTTTTAGCAAATTTTAGGGTTCTTCTTTGTTATGTGCATTGTTGGGAGATGTTACGTACCTGTATTT GGATTTTTCTCATTTTTTTACAATCTCTGAAATTCATGCATGATGGTGTTTTTGTTCTTGTGTATGAGTTTAGGTACTGG TTTGATTTGTGTTTGGATTTCAACTTGAGATACATGAAATCATGATTGTATTTGTTTGTATTTGCATCAATGTCAAACCA TACAAACATGCAGTTATTGTAGTTGAATTTTGGTTGTGTGATTCTGCAGATGGCGGCGGAGACTTTCCTATTCACTTCTG AGTCAGTGAACGAGGGGCACCCTGACAAGCTCTGTGACCAGATCTCTGATGCTGTGCTGGATGCATGCCTGGAGCAGGAC CCTGATAGCAAGGTTGCATGTGAGACTTGCACCAAGACCAACTTGGTCATGGTCTTTGGAGAGATCACCACCAAGGCCAT TGTTGACTATGAGAAAATTGTGCGTGACACCTGCAGGAAAATTGGGTTTGTTTCAGCTGATGTTGGACTTGATGCTGACA ACTGCAAGGTCCTTGTTTACATTGAGCAGCAGAGTCCTGATATTGCTCAGGGTGTGCATGGCCATTTGACCAAGAGGCCT GAGGAAATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCTACCGATGAGACCCCTGAGCTGATGCCTCTGAGCCA TGTCCTTGCTACCAAGCTTGGTGCTCGCCTAACTGAGGTTCGCAAGAATGGAACCTGCGCTTGGCTGAGACCTGATGGTA AGACCCAAGTCACTGTGGAGTATTACAATGACAATGGTGCTATGGTTCCTGTTCGCGTCCACACTGTTCTCATCTCAACC CAGCATGATGAGACTGTCACTAACGATGAAATTGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTGATTCCTGAGAA GTATCTTGATGAGAAGACCATCTTCCACCTGAACCCTTCTGGCCGTTTTGTCATTGGTGGTCCTCATGGTGATGCTGGTC TCACTGGGAGGAAGATCATCATTGACACTTATGGTGGATGGGGTGCTCATGGTGGTGGTGCTTTCTCAGGGAAGGACCCA ACTAAGGTTGATAGGAGTGGGGCTTACATTGTGAGGCAAGCTGCTAAGAGCATTGTTGCTGTTGGACTTGCAAGGAGGTG CCTTGTCCAGGTTTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTGTTTGTTGACACTTATGGTACTGGGAAGATCC CTGATAAGGAGATTCTGAAGATTGTGAAGGAGGAGTTTGATTTCAGGCCTGGTATGATCTCCATCAACCTTGATCTCAAG AGGGGTGGCAACAACAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGAAGGGATGATGCTGACTTCACATGGGAAGT GGTGAAGCCTCTGAAGTGGGAGAAGGCTTAA
CDS sequence (LotjaGi4g1v0312800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGGAGACTTTCCTATTCACTTCTGAGTCAGTGAACGAGGGGCACCCTGACAAGCTCTGTGACCAGATCTCTGA TGCTGTGCTGGATGCATGCCTGGAGCAGGACCCTGATAGCAAGGTTGCATGTGAGACTTGCACCAAGACCAACTTGGTCA TGGTCTTTGGAGAGATCACCACCAAGGCCATTGTTGACTATGAGAAAATTGTGCGTGACACCTGCAGGAAAATTGGGTTT GTTTCAGCTGATGTTGGACTTGATGCTGACAACTGCAAGGTCCTTGTTTACATTGAGCAGCAGAGTCCTGATATTGCTCA GGGTGTGCATGGCCATTTGACCAAGAGGCCTGAGGAAATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCTACCG ATGAGACCCCTGAGCTGATGCCTCTGAGCCATGTCCTTGCTACCAAGCTTGGTGCTCGCCTAACTGAGGTTCGCAAGAAT GGAACCTGCGCTTGGCTGAGACCTGATGGTAAGACCCAAGTCACTGTGGAGTATTACAATGACAATGGTGCTATGGTTCC TGTTCGCGTCCACACTGTTCTCATCTCAACCCAGCATGATGAGACTGTCACTAACGATGAAATTGCTGCTGATTTGAAAG AGCATGTGATCAAGCCTGTGATTCCTGAGAAGTATCTTGATGAGAAGACCATCTTCCACCTGAACCCTTCTGGCCGTTTT GTCATTGGTGGTCCTCATGGTGATGCTGGTCTCACTGGGAGGAAGATCATCATTGACACTTATGGTGGATGGGGTGCTCA TGGTGGTGGTGCTTTCTCAGGGAAGGACCCAACTAAGGTTTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTGTTTG TTGACACTTATGGTACTGGGAAGATCCCTGATAAGGAGATTCTGAAGATTGTGAAGGAGGAGTTTGATTTCAGGCCTGGT ATGATCTCCATCAACCTTGATCTCAAGAGGGGTGGCAACAACAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGAAG GGATGATGCTGACTTCACATGGGAAGTGGTGAAGCCTCTGAAGTGGGAGAAGGCTTAA
Protein sequence (LotjaGi4g1v0312800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRKIGF VSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN GTCAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF VIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKEEFDFRPG MISINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKWEKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 281 | 281 | 2.0E-118 | ||
| PANTHER | 4 | 280 | 277 | 7.4E-246 | – | |
| PANTHER | 4 | 280 | 277 | 7.4E-246 | ||
| SUPERFAMILY | 5 | 111 | 107 | 2.16E-47 | ||
| Pfam | 6 | 103 | 98 | 1.2E-42 | ||
| Gene3D | 7 | 244 | 238 | 1.6E-125 | – | |
| TIGRFAM | 7 | 280 | 274 | 3.6E-125 | ||
| CDD | 7 | 358 | 352 | 0.0 | – | |
| Gene3D | 13 | 276 | 264 | 1.6E-125 | – | |
| SUPERFAMILY | 117 | 241 | 125 | 3.24E-53 | ||
| Gene3D | 119 | 141 | 23 | 1.6E-125 | – | |
| Pfam | 119 | 240 | 122 | 1.7E-47 | ||
| ProSitePatterns | 121 | 131 | 11 | - | ||
| Pfam | 242 | 280 | 39 | 8.3E-19 | ||
| SUPERFAMILY | 242 | 361 | 120 | 9.03E-44 | ||
| ProSitePatterns | 268 | 276 | 9 | - | ||
| Gene3D | 277 | 365 | 89 | 3.0E-29 | – | |
| PIRSF | 278 | 365 | 88 | 1.0E-22 | ||
| Pfam | 279 | 355 | 77 | 7.1E-20 | ||
| PANTHER | 279 | 364 | 86 | 7.4E-246 | ||
| PANTHER | 279 | 364 | 86 | 7.4E-246 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi4g1v0312800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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