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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0321500 |
| Transcript ID | LotjaGi4g1v0321500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily protein; TAIR: AT5G20740.1 Plant invertase/pectin methylesterase inhibitor superfamily protein; Swiss-Prot: sp|P17407|21KD_DAUCA 21 kDa protein; TrEMBL-Plants: tr|A0A072V2U1|A0A072V2U1_MEDTR Plant invertase/pectin methylesterase inhibitor; Found in the gene: LotjaGi4g1v0321500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:69947557..69948671) extracted from Lotus japonicus Gifu genome v1.2.
CAAACACTTCTTAACAGGCACCACCATTTGTCCTATAAATCCACCCTCGCATTAAATCATTCTTCCACCACCCTACTCCA TCCATCGATCTCTAGCATATTGTAACAACTCAAAGCTAAACTCTTCACTCTTCCAAGCTCCTCCTTCTTCCTTTCCATTC TTTAAATCAAAAAAGAAGAAATGCCAAAACATAACCCTCTCTCCCTTGCACTCTTTGCTAATTTCTTCCTCTTGTTCGCC GTTGCTGCTACAACGGCGGCAACAACCCCGCAAGATGAGGTGTTCCGCTCATCTTGCGCGGAGGCCAGATACCCTGCCCT ATGTGTCAAAACCCTCTCCAAATATGCAGGCTCCAACACGAAGCCCTTGGACCTGGCCCAAGCTGCCACCAAGGCCAGCC TCGGCCAGGCTCGCGCCCTCTCCATTTACCTCAAAACCACCGTCCAGGCTCAGGCCACGAGCACCAGGCAGCGAGCTGCA CTGAGTGACTGCATGGCTCAGATCTCCGACTCTGTAACCCAACTAGACAGGACGTTGAGCGAACTGCAACACCTCCAGGT GAAATCATTCCAATGGCAGATGAGCAACGCCCAGACGTGGGCCAGCACAGTCATGTCCAACGGCGGCTCGTGCGTGCGCA GCTTCAGGAATAGCGATGCGGACGCGAAGCTCAAGTTGGACATGAATCGGAGGGTCACCACCGTTACCATGCTCACCAGC AACGCGTTGTATCTTATCACTCGCCTCAGTGAAGGCACGAGTCGCAACCATCGCTCTAATTCCCATCCTTGATGATTAAT AATTAGTGTGTATGAAAATCTTTGGGTAAGGACTAGCTGTTTTTGAGCGAAAGCTTTTGGTTTTGGCTTTAATTTTCTGC AAACACAAGATGTAAAATCAACGTTTGTAATATATAGCTTGTCTGTTTAATTATCTATGTACGTGTGTGCTCAATGTAAA ATGTGTAATAATAATGCACCTTTTTGTAATCTTTCTATTTCCTCTTCTACTGCTCAAGCTTGCCAGGTTTTTCGTCCTTT TAAAGAAAATAAACAAATTTGATCATTTTTTTTATCGAACAAAATAAGGTGGGTTGAGATTCTCTTAAGTGATTT
CDS sequence (LotjaGi4g1v0321500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAAACATAACCCTCTCTCCCTTGCACTCTTTGCTAATTTCTTCCTCTTGTTCGCCGTTGCTGCTACAACGGCGGC AACAACCCCGCAAGATGAGGTGTTCCGCTCATCTTGCGCGGAGGCCAGATACCCTGCCCTATGTGTCAAAACCCTCTCCA AATATGCAGGCTCCAACACGAAGCCCTTGGACCTGGCCCAAGCTGCCACCAAGGCCAGCCTCGGCCAGGCTCGCGCCCTC TCCATTTACCTCAAAACCACCGTCCAGGCTCAGGCCACGAGCACCAGGCAGCGAGCTGCACTGAGTGACTGCATGGCTCA GATCTCCGACTCTGTAACCCAACTAGACAGGACGTTGAGCGAACTGCAACACCTCCAGGTGAAATCATTCCAATGGCAGA TGAGCAACGCCCAGACGTGGGCCAGCACAGTCATGTCCAACGGCGGCTCGTGCGTGCGCAGCTTCAGGAATAGCGATGCG GACGCGAAGCTCAAGTTGGACATGAATCGGAGGGTCACCACCGTTACCATGCTCACCAGCAACGCGTTGTATCTTATCAC TCGCCTCAGTGAAGGCACGAGTCGCAACCATCGCTCTAATTCCCATCCTTGA
Protein sequence (LotjaGi4g1v0321500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPKHNPLSLALFANFFLLFAVAATTAATTPQDEVFRSSCAEARYPALCVKTLSKYAGSNTKPLDLAQAATKASLGQARAL SIYLKTTVQAQATSTRQRAALSDCMAQISDSVTQLDRTLSELQHLQVKSFQWQMSNAQTWASTVMSNGGSCVRSFRNSDA DAKLKLDMNRRVTTVTMLTSNALYLITRLSEGTSRNHRSNSHP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| TIGRFAM | 6 | 189 | 184 | 4.2E-28 | ||
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 7 | 195 | 189 | 1.2E-69 | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| PANTHER | 7 | 195 | 189 | 1.2E-69 | – | |
| Phobius | 19 | 26 | 8 | - | – | |
| Phobius | 27 | 203 | 177 | - | – | |
| SMART | 30 | 185 | 156 | 2.8E-34 | ||
| Gene3D | 31 | 191 | 161 | 1.7E-17 | ||
| SUPERFAMILY | 35 | 189 | 155 | 1.57E-26 | ||
| Pfam | 36 | 184 | 149 | 8.9E-29 | ||
| CDD | 37 | 190 | 154 | 1.78456E-36 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. |
Expression pattern of LotjaGi4g1v0321500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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