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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0322200 |
| Transcript ID | LotjaGi4g1v0322200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Stress responsive A/B barrel domain protein; TAIR: AT3G17210.1 heat stable protein 1; Swiss-Prot: sp|Q9LUV2|POP3_ARATH Stress-response A/B barrel domain-containing protein HS1; TrEMBL-Plants: tr|A0A151TDN5|A0A151TDN5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0322200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70052737..70058435) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATATCATAGTATATTTGCAACAGTAAAAGAATAAGATAATGTGATAGTATATATTAGAAGAGTGGGAGGGAGGGA CAAGAAAAGAAAAGGAGAAATGGAGGAAGCAAAAGGAACAGTGAAGCACGTTGTCCTCGCCAAGTTCAAAGATGATATAA CACCAGAGCAGATTCAGGAGCTCATCAAAGGCTATGCCAGTCTCGTCAACCTCATCCCATCTATGAAGTCATTCCATTGG TACGGTACCTATATTTCTCTATTTCTCTATCCCTTTTTATGTCTTTGTTTTCTTCAATCCAACAACCCATTTATTAGATC AGGGCACATACCACTCACTTCTTCACAAAAATCCAAAAACTGGGATCATTGACCAAAAAGATTGATTTTTTAATGAATTT ATCAAATGGGGTTGACGATGAATATTACAACATTGATTGGCTCATTCCCAGTGTTATTTATAACCATCATTCTAGTCCAC TGGATACTGTGCTTATATCATTCAGAATCAGAATCGTTAGTGGTCGTTTTTTTTATGAGATTCTTAAAGTCTATGAGTGA AATTGCAGGGTTCTTAGATCAAGGTCTATGTTTTTTTTTTCTGCATCCTAGGGTCTTTTGTTATTAGTGATTCATTGTGA TATTAGTAAGTGTGAAAAAACTAAGGAAACAGATTAACAGATGACTTAGATGCATTGTGGATTGTCATTGTGAATTTGCA ATGATGGTATTAGCCCTGATTCTGGATACTCTCTGTTTGTCATATACTATATGGTTGTACATGGCAACAAGTCTTAACTT AAGTGAGGTTTTAAATTACGGTTGCGAAAATTCGGGTTGATTCAGCCGTAGGTGTGGTCGTGATGATGTTGTTGCGTGGA CTCCAAAATGCTTAACATTGAGGACTGCAATTCAAAACTCTGGTCTTAGGTGCTAGCATTGGAGTTTCACCGTTTGATGG CCTGAATTTCTACGGGCCGAAAATATTGGCAAATCTACAATTTCAATGGCTCAGTGATTACAATTAAAATTATATGTTGT CATGCTAGAAAACATGGAACTCAAATAGGTGCTTGAGTAAAATGTAACATTTTATTAAACATCTGCACTTGAAACCCTTG TAGTGGCTGGCTTGGTTAAAACTTTTCAAATAGCAATATATCTAATTAATGCTATATTTTTGCTATCCTTCCATTATGAT TTATTGTAGGGGCACGGATGTAAGTGCTGAGAACTTGCATCAAGGTTTCACTCATGTCTTTGAATCAACATTTGAGAGTA CTGAAGCTGTTGCTGAGTATGTAGCTCATCCTAACCATGTTGAATATGCAAATTTGCTTCTTCCCACCTTGGAGAAAGTG ATTATTGTTGACTATAAGCCTTCCACTGTTAACTTTTGATTGTATAAGTAATGGAATCACGACTGCCAGTGTTTTATGAA AAATAAATTCTGTATCCTCTTTCAACAACTCTTGTGTACCCTGCAATGCTCTATCTTGTCATTGTTGAGTGATTTTCTCT TGTTAGATTGGAAATACTTGTTCTGCTTTCTTTTATAAAAAAACCTGATTGATCGGACAATGTATCATTAAATCACTCCA AGGTTTAAAATTAGTAAATCAATTATCCCTAATTTTACCTTAATTAAGATATTGATGTACATTACTTTAAGGTTACAGAT TATATATATTTTGAGTTGGAAGAATAGGGGGTTGGTTGGATTTGGGGAGAAGTTTCTGGAAAATGGTGAATGGTGTGACC TGAAATTTAGTCTTTTGAATAAAAGAGTAGTAATTGGGAAGAATTTTTCCCCCCACAGTTCTGTTTCTCTCCATTCCTAC TGATATTTTCTTTCTTGTCATTAACTATACAAACATTCTGTCTTGCATCAAAAGACAAAAGAGTTCTATTCCTAGTTCTA ATTTCAGCAACTAGTCTTACACAGTTCATTTCCTATCTCTCTCCATCAATAAATAGTAATCAAGTAAAAGTGGAGTGGAT ATTTGAACCAACAGGGAAATAAATTCCTTCGTCACACCCTTATAAATCAAGAGTTTTGGAAATTCACAAAATAATCACCA ACCACAGAAAACTTCAATTTTCACTCTAATTTTCCCCCTCAAAGAGTTCCTCTTTTATTGGTTAAATGCTAATTCGACAC TTGTAAGAATGTCTTTAGTTCCAATTCAACAGAATATTCAGTAACCAGAAATGAGCCGTACACTGATAAACCCAGGTTAG TGCTCGCTCCATCATATATAAAACACTTGATCAAGCCACAAATACTATCACATAGCAGAGAACATTGACACAGACTGAAG TGTGCTAGGTGATGCACAAGCTTCAATTTTCATATCAGCAAGCAATTAGCCATGAACTACCAGTCCAAGGGGTAGTTCAT CATATACTTGGAACGGAATCTTCTATTCTAGTTTGGTGTCTCTTTTCCTGTCCTACCAATAAAATTGTGTCATGTCATTT AAAATTACTCGTGCAAATTTATAATTTCATGCCCATGCCCTTTTTAACTAACATGACAGATTTCAGATCAAGTTACAGTA AGACTGTAAGAGCTCTATCAATGTCTCCGAAACATATTTTTTCAGCAGATGTTCAGTACCATTTAACTAAAACAGCATGT CTAAAGAAAATTATGATACTAGATCACTGTACTCTAGAAGTAACTCTCATCTGAAATCTGAATAACGTTGTTTACTATGG ATAACCAAGCAGATGAAGACAAATCATAGTCTGATGTTCAAGGGTGAAAATGAATTGTTTGTGTCTTGTTTGGGGTGATA CAGTGATCACCAAAAAAGCTCACATGGCCACATGTTTAGTTGGTCAATGTTGTGTAACCCACGCTCAGTCACGATGAGAT AAGAAACTAGAAGAGTGGGAGGGAGAACAAAAGAAAAGGTTGTGGAAGGAGAAAGAAATGGAGGAAGCAAAAGGAGTAGT GAAGCACGTAGCTCTCACCAAGTTCAAGGATGACATAACACCAGAGAGAATTGAGGAACTCACCAAAGCCTATGCCAATC TCCTCAATGTCATCCCATCTATGAAGTCATTTCACTGGTACCTTCCTCTACCCTTTCTATGTCTTTGCTTATAGCATTCA GATCTGACCCGTTAGTGTATGCTTGGTTTAATGCTAGAGCAAATGCTGACGTGATTTCAAGTTAGTTAGAATTTATCACG TTGAATTTAACGTTGACCGGAGAAACATGATTTTGTCTCATTGAAGTCAAACATGAATCCATGTTGACTTCAATGAAAGT CCAAACACACTAAAGTCCGTGTGGACGAGTTTTGCTGAGATTCTTTTAGTCCATGGGTGAAATTGCAGGGTTCTCATATC TGGATCTATGCTTTTTCTGCATCTGAGGGTCTATTGTTATTAGTCCTTGAGTAAACTGTAACATTTTATTAAACATATGC ATTTGAACCCTTGTAGTTCCTTGGCTGTGTTTGCTAACCTTCTAATTTGATGCATTATAAGGGCAAAGATGTAAGTGCTG AAAACCTGCATCAAGGTTTTACTCATGTGTTTGAATCAACCTTTGAGAGTATGGAAGGTGTTGCAGAGTATGTAGCTCAT CCTGCCCATGTTGAATATGCAAATTTGCTTATCCCCTGCTTGGAGAAATTCGTTATTATCGACTATAAGCCCACCGTTGT TAAGTTTTGATTGTATAAGTAATGGAACCATTACAGTCAGTGTTTTCTGAAAAATAAATTATGGATCCTCTTTGTGTACC CTACAATGCTACATCTGCTACAGTTCCTCTTCTAGTGGATGAATTCAGACTTTATTAGAATTCCATTTCAAGAAGCCTTT ATGAAGCTATCTCCACCAATTCAGATTCAGCTTATTAATTTCTCATGCACTCTCCTCTTGGCCTGATTTTGTTAATGTAT TGCTTTATGGTAATCTGTATGGATTGAACATAATCCATTAATAAATAAGCAAGGATCAGTGTCCTTTTGCTAAAAACTCA CTTCATCCAAGACTTTATAAGTTGACCAAGAAAAAATCCCTAGCTTTCTAAATTGACCATATACAAATTCAATCATAGCT GCACGTGATGAAAATTGTCTCCCTTAATATGAAGTAGAACCAATTTGTCATATAACCTGTATTGAAATGAACATGAGTCC TCCAATCTTATGTGCAAAAACTGTCTCCGACCGCTCCATAAGGCTTTCTAACGCGGTTGGGAGCATCCTAACCTCTCCTC TTAAGGGCACATGTTGCCAAGAGGCCTACAACAATAGGTCGCCCCTTTAAACATAGGGGTCAAGTATTATAAATTAAGCT TAATATGACAAGTGGGGAACATTGCCTCGCCCAGTGACTATATAGTTCCTCCCTTATGCCTAACATGACTTCATCCCTGT GTAGTTCTACATTGAGTCGTCCATAACCAATTGTCCGAAGTGGTTAGGTGTTCAGTTGTGTGATTAAATTGAACTTGTGA GCAAACCAATATAGCTTTGTCTATACATTTTAGGAGAGTATGATTTATAGTTTTCCACCTCTAAATGACATATAGGGCAT AGACTATCTGGAACTTGATGCCTCTTGGGGAAATTGGCTTAACCGGGACCGAATTTTCTACCATAAATTCTATGAAATAT TTTATTCTTCTTTGGCACCTTAATTTTCCATCACCACTTCTACAACACATCAAGTGGGAAAGAACTACCATGGAACCCTT AGTTGTGATTTTTTCCCTACATGGCAGTCACTTTTAAGTTTTAATGGTGAAAGACCCTATTTTTAGTGTGGCATGCTAAT AGATGTGATCTATGTATAAGACTAATGGGAGTTTGTACGGCTTTAAAGACTAACATGACCTAATGTTATGAAGAGATAAT ATTCCTAGCTTCTCCTTGTAGAATCAAGCTTTGCAATGAGTATATATACTAAAATATAAAACTATTCATATGTTCGGCTT GAGCTATAAGTCAATTAAAATTGGCTGATAGATTAATATAATGATCTGTTTTTTCTTATCAAGTATAAGTTAATTATCCG TGAATCTACCAATAAGTAATAGATTATGATCATTTGAAAAGGTCTAGATAATTCGATGCAGCCTAGTCCAATTTGGCACA ATATTTTTTTTTTGGCATAACACAGTGTTATAGAAATTGAATTTTTCATTTTTAAAATCTTGCCCTGGATACCTTGAGGG ACAAAAATATATAGTTACAGAAAAGAAGACAAATATTTTTTTTGTTTCAAATGTAAACAAAGTACTTAAATTGGGGGAAT TTTGTGGGGTACTACTTAAGTCTGTTCTGTTTTCATTTAAATGTAAACGTCTTTTCTTGTTTGGTTGTTATTTTCTAATT TTATTTTATTTTAAGTAAAAATAAGGAGTATGTGTTAGAATTTTGGGTCACAAATATAACTTTTAATTGTGTTAGGGCCA TTATTTAATTAGCCAAACTAAAGTGGTCTATTTAATATTGATCTTATGGCTAAGGGCATATGTGTTATGAAAAGGTATTG TGCAGATACCATAAGGCAATATTCTAATTTGATGAGGGGCCAAATTAAAAATATTGAAAACAGAATTGTAACTGATGCAG TTACTTATAGGGTTATGGTCCCCAATTGTAGACACAACGTAACAACGTAAAAAAAAGTTTCTCCTCATCCCCATCAGAGG AGAACATCAGGAAACCCTA
CDS sequence (LotjaGi4g1v0322200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAAGCAAAAGGAACAGTGAAGCACGTTGTCCTCGCCAAGTTCAAAGATGATATAACACCAGAGCAGATTCAGGA GCTCATCAAAGGCTATGCCAGTCTCGTCAACCTCATCCCATCTATGAAGTCATTCCATTGGGGCACGGATGTAAGTGCTG AGAACTTGCATCAAGGTTTCACTCATGTCTTTGAATCAACATTTGAGAGTACTGAAGCTGTTGCTGAGTATGTAGCTCAT CCTAACCATGTTGAATATGCAAATTTGCTTCTTCCCACCTTGGAGAAAGTGATTATTGTTGACTATAAGCCTTCCACTGT TAACTTTTGA
Protein sequence (LotjaGi4g1v0322200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEAKGTVKHVVLAKFKDDITPEQIQELIKGYASLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESTFESTEAVAEYVAH PNHVEYANLLLPTLEKVIIVDYKPSTVNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 109 | 109 | 1.6E-47 | – | |
| PANTHER | 2 | 108 | 107 | 8.3E-57 | – | |
| PANTHER | 2 | 108 | 107 | 8.3E-57 | – | |
| SUPERFAMILY | 8 | 106 | 99 | 2.68E-33 | ||
| ProSiteProfiles | 8 | 102 | 95 | 35.218 | ||
| SMART | 8 | 104 | 97 | 1.2E-30 | ||
| Pfam | 8 | 103 | 96 | 2.2E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0322200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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