Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0323300.1

Overview

Field Value
Gene ID LotjaGi4g1v0323300
Transcript ID LotjaGi4g1v0323300.1
Lotus japonicus genome version Gifu v1.2
Description Inter-alpha-trypsin inhibitor heavy chain-like protein; TAIR: AT1G19110.1 inter-alpha-trypsin inhibitor heavy chain-like protein; Swiss-Prot: sp|Q54DU5|Y2028_DICDI von Willebrand factor A domain-containing protein DDB_G0292028; TrEMBL-Plants: tr|A0A151SSS0|A0A151SSS0_CAJCA Inter-alpha-trypsin inhibitor heavy chain H5; Found in the gene: LotjaGi4g1v0323300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:70121367..70126347) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCGGAGGAATTTTCGAGAGCGGTGGACGACGGGCTGAAATTATCAAAGCGAATTTACTTCGGGAAGGACAGGGCGGT GGCGCCGCCCAAGCTGCCGGCACCGATGGCTAGGTCACCGGACGCGCTTCTTCCCACCGCGCCGATGGTTTATGCCGTGA TTTACGATCCAGGGATCGTGGATAACCCTGACATCCCGAGCTACCAGCCTCATGTGTATGGACGGTGCGACCCTCCGGCG CTGATTCCCCTTCAGATGAACGGTGTTGAGATGGAAATTGATTGCTATTTGGATACTGCGTTTGTCACCGTTTCTGGTTC GTGGAGGCTCCATTGCGTCATGGGTAGCCGCGCGTGTGATTGCCGTATTGCTATTCCCATGGGGCACCAGGTACTCTTTT CTTTCATCATGATGATTTCTTCATTGATTTCTCCTTTTAGATAATAGCATGAGCTGGAAATGATGAATTGTTTGATGTTT CTTTTGATTGATACATGCTTAATTTCATTCAGGATTTAGGGTATGATGAACTAAAATCAGGCTTGTTAATAGCGCGCTAT AGCGGCACAATAGCTTATAGCGTGGGTTCACCGTTACTCCATTATTCACCGCTATTTGCGCTATTTTCCGCTATAGCGCC ACAATAGCGCTCGAAATAGACTTTTTTGGGTTTGCCACTATACTACACTATCCGCCATTAACAACCCTGACTAAAATGAG AAATTGTTTGTTAGTTACTGTCTCTAATGGAAGAATTTCTGGATTTCTGCTTTGCTGGTGATGGAGTGGAACTTGTTTGA ATAATATTGTTTTGAACATGTTGAAGAGTTTGTGTTCTGATATGGTTTGGCTAACAGGGTTCAATTCTAGGTGTGGAAGT TACTGCTCATAGAAAAACATACTCTACTCAGCTTGTTGTAATGGAAGACAACAGTGTGAATGAAAATGCCACCATTGCTC AACAAGGAGGCTTTCTCAAATCAAATATATTTACTTTGACTGTACCTCAGGTGAATAAATAGCCTGCCTCTAGAAGATTT TGATTTCGAAGTATGTATTTTTTAGAGTCGTCTTATCTTGATGCTGTTTATCTGTTGTTCTTGTGATCAGATTGATGGGG GTACCAATTTATCGATTAAAATTCAATGGTCTCAGAAAATAGTGAATTGCAATGGGGAGTTGACTTTGAACGTGCCTTTT ACCTTCCCTGAATTTGTCACCCCAGCTGGGAAGAAAATGTCTAAAAAGGAAAAGATACAAATCAATGTGGAGGCTGTTGC TGGAAGTGAGCTTCTGTGCAGGACAATGAGCCACCCCCTAAAGGTTCTCATTTGGTTGGATTTTTTATGGGACTGCAGTT GAAATTTTACATATGAGATAACCAATTGAACATTTTATCCTCATTGTCCAGGAAATGAGGCGTGATGCTGGGAGTATTGG TTTCTTATATGATTCCCAAGTTCTCTCGTGGTCAAATACTGATTTTAGCTTTTCATATGCTGTAAGACTCACCACCATTT TATCTTATTCTTTTATTTGTAGTTTCAGCTGTTGAAAGGTTATCTTATCAGCAACTTACATGCATGCAGGTTTCCTCCAG TCGTATAGATGGTGGTGTTCTTTTGCAATCTGCATCTGTGCATGATTTTGATCAAAGAGAGATGTTCTACATGTACCTTT CTCCCGGAGATATTCACCGTAAGAAGGTTTGTGCTCCAACTGTAAACTTTCAGGTCTACATGTAATGTTATATAAACATT CTCATGTCTGGTTCTACTCCATATGCAGGTATTCAGAAAGGACATAATATTCGTTATTGACATCAGTGGAAGCATGCAGG GAAAGCTAATTGATGACACAAAGAATGCACTATCGTCTGCCCTCTCTAAGCTTAATCCTGATGATTCATTTAATATTATA GCCTTTAATGGAGAGAGTTATCTATTTTCAAAATCGATGGAACCGGCTTCTAGTGATGCTGTTGAAAAGGCCACTGAGTG GATGGATGTGAACTTTGTCATTGGGGGTGGTACAAATATTTTGCGTCCCTTAAACACGGTACTATTGAATATTAATATTT TTTATAAACATAAAGATCATTGAGCAGTAGTGATTAATACTTAACCCAAAGTGTTATGCACTGGTTATACAAATCAATCT ACGCTCACTTGTGGCATGGTTAATACTTAATACTGTTTTTGATGTATTTTTTATTATCATAGTAATTGTTTTATGCCCTC TGTAATTGGATAGATTACATTTTACAAATTTACTGACCTTCTTGTTCAGGCAATAAAGATCATTGAGCAGTAGTGATTAA TACTTAACCCAAAGTGTTATGCACTGGTTATACAAATCAATCTACGCTCACTTGTGGCATGGTTAATACTTAATACTGTT TTTGATGTATTTTTTATTATCATAGTAATTGTTTTATGCCCTCTGTAATTGGATAGATTACATTTTACAAATTTACTGAC CTTCTTGTTCAGGCAATAGAGATGCTATCCGGTGCTCAAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGT TGAAGATGAGAGGCAAATTTGTGATTTGGTAAAGAATCATATGACCAATGGAGAGTCAATATGCCCCCGAGTTTACACTT TTGGCATAGGTATAAATCCAGAATTTTAAAAGCCCTTATCAGAATTTTCCCCTTGCAATAAATTTTTAACGTGATATTAT TTTTTCTGGTAAAACCTATTTAAAATCTTGCTCTTAATTCTTCTAATTTGTTGTTAGTAATGGTAATGTTCTTCATTCTT TCACTTGCTTATGTTAAACTTAACACCTCATTCAACCCAGGCTCATTCTGCAATCACTATTTCTTGCGAATGCTTGCTGC AATTGGTAGGGGCCAATATGACGCTGCAGTGGATGTCGGTAAGTCTTGAGTTTAACTTGTAAAAAACTAAATACCATGAT ACATGCTTATATTTTTTTCGTGTTGTAAGTTAAAATGACATTATATGATTTTAGAGAAATGTATACCTGACAAACAATTA GAGTACACGAGGTTGGTTCCTTGGTCTATGCATTCTATTTGGAAGACCTGGTTATTGACTCTGCCGTGAACTTTTGAGTT TTCTGATTTTCTTAAAGGAAGAGAGATATGATACCGATTTTATATTAATATTTATATGCAAAAGTTCTTTCAGTTACCAA ATCTGAATTTTTTTATTTTCTGCGTTTACAAGTATTTTATAGCTCCTCTCTTTTCTGAATTGCAAGATTTGGTTGAGCCT CGAATGCTGACGTTGTTTGAAAAGGCATCATCTCTCATTCTCGCAAATATCAAAATGGATGTATTGGATGATATTGATCA ACTTGAGGTAATATTTTACTACTGCTACCTGGCTAGATTGGTTTTTTTTCTTTCCCTCATTTTTGTGTACCTGCTTTTTA TTCTTACCGATATATCCTATTATAGCAATTTATTTTCTATTTAGACATGCTACTCTACTTTGAATTTTGTCCAACTTACC CTGAGCTTGTTGCTGTCTCTTATGGCATTATCTGCAATTTTTTTATAGGTATATCCTTCCCACATTCCAGATCTTTCAAC AGAGGGTCCATTGATTTTATCTGGCAGATATAAGGGAAATTTCCCCGAAACTGTTAAAGTCAAAGGTATCATGGCTGATT TCAGTGATTTTGTAATAGATATGAAGATTCAAACAGCTAAGGACATACCTGTACAAAGGGTAAAGTACTCTGCTGCTTAG CCAACTCAAGTTTTCTTATTTTTGAAATTATATGTGTGCAATTTCTGAAGACAGTGTTCTAAGTTTTGTTTATGGTTGCT GATGAACTATTTATATGAAAACTCTTTGAACTTCGAATTATCTGTTTTTTCATAAAGCACAAGTTTATAGTTGGGTGATG TTTTACTATTATTATAAGATCTATTAGATTAGGATCTAGACAAAATAAAGGTATTCCTTTTCTTCATCTATCTTTGTTGT GAGGTTGTATAAAGAACTGTAGTCTACTGGCCTTCTTGACCTTTCTCTGATGTGTGTGATTCACAAATACATGTTTAATT CATCATAGCCTCAGAGTCACTGTCCTGATTGTCCACAATTTTTGTTATTATATTGCTCTTTTTCTATCTAACAGGTTTGT GCAAGAGATCAAATAGAGCATCTTACTGCTCAAGCATGGCTATCCGAAAACAAACAATTAGAACAGCAGGTTCATTAATT TCTATGAATATTCCTCCACTCATTACACAAGGTATACATCCAGTTCTTTTTTGAATAAAATGTTCTTATGCCGCATCATT TAATTGGCAGGTTGCCAAACTAAGCCTGCAGACTGGCTTTATGTCTGAGTATACACGTATGGTAGTACTTGAAAATGATC ATCTAAAGAAAGCCAAAGAATCAGCTGGTGGGAAAGAAGTATGTATCCGAAATTTTGAAGAATTTGTAATGCTCTCATTA TGAAATTTGTTTCTAACCACAGTTTTAAATATGAAAAGTTTATTTTCTGTCACTTAAAAATAACTATGTTGGCTCTGTTT AATTGACATTAAAGATGGATAAAATCTTAGGTAAAACCTTTCTAATCAGTAGCTTTTCAATCATTGCAACCAACAGGTGT CAAAAAAGAGTCATGCTCCACACGAGGCAAACACAAACGTACAGGGCCAGAGAATGATTTTACTCCCACACATAGGTGTC GGCTTTGGCAACTTGACTGCAACTGCTGAAAACACTCCTCCAGGAGCTGAAAAGATGCTTGAAATGCCCGAAATCTTTAA GGCGGCCTCAAATTGTTGTAGCACCTTGTGCAGTTACTGCTGTTGCATGTGCTGCATCCAGTGCTTTACCCGAATGAACA ACCAATGTCTCACTGCATTGACTCAGCTTTGTGTTGGTATAGGATGCTTCGGCTGCCTCACATGTTGTTCAGACATATGC TGTGGTGGAAACGATAGTTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0323300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGAGGAATTTTCGAGAGCGGTGGACGACGGGCTGAAATTATCAAAGCGAATTTACTTCGGGAAGGACAGGGCGGT GGCGCCGCCCAAGCTGCCGGCACCGATGGCTAGGTCACCGGACGCGCTTCTTCCCACCGCGCCGATGGTTTATGCCGTGA TTTACGATCCAGGGATCGTGGATAACCCTGACATCCCGAGCTACCAGCCTCATGTGTATGGACGGTGCGACCCTCCGGCG CTGATTCCCCTTCAGATGAACGGTGTTGAGATGGAAATTGATTGCTATTTGGATACTGCGTTTGTCACCGTTTCTGGTTC GTGGAGGCTCCATTGCGTCATGGGTAGCCGCGCGTGTGATTGCCGTATTGCTATTCCCATGGGGCACCAGGGTTCAATTC TAGGTGTGGAAGTTACTGCTCATAGAAAAACATACTCTACTCAGCTTGTTGTAATGGAAGACAACAGTGTGAATGAAAAT GCCACCATTGCTCAACAAGGAGGCTTTCTCAAATCAAATATATTTACTTTGACTGTACCTCAGATTGATGGGGGTACCAA TTTATCGATTAAAATTCAATGGTCTCAGAAAATAGTGAATTGCAATGGGGAGTTGACTTTGAACGTGCCTTTTACCTTCC CTGAATTTGTCACCCCAGCTGGGAAGAAAATGTCTAAAAAGGAAAAGATACAAATCAATGTGGAGGCTGTTGCTGGAAGT GAGCTTCTGTGCAGGACAATGAGCCACCCCCTAAAGGAAATGAGGCGTGATGCTGGGAGTATTGGTTTCTTATATGATTC CCAAGTTCTCTCGTGGTCAAATACTGATTTTAGCTTTTCATATGCTGTTTCCTCCAGTCGTATAGATGGTGGTGTTCTTT TGCAATCTGCATCTGTGCATGATTTTGATCAAAGAGAGATGTTCTACATGTACCTTTCTCCCGGAGATATTCACCGTAAG AAGGTATTCAGAAAGGACATAATATTCGTTATTGACATCAGTGGAAGCATGCAGGGAAAGCTAATTGATGACACAAAGAA TGCACTATCGTCTGCCCTCTCTAAGCTTAATCCTGATGATTCATTTAATATTATAGCCTTTAATGGAGAGAGTTATCTAT TTTCAAAATCGATGGAACCGGCTTCTAGTGATGCTGTTGAAAAGGCCACTGAGTGGATGGATGTGAACTTTGTCATTGGG GGTGGTACAAATATTTTGCGTCCCTTAAACACGGCAATAGAGATGCTATCCGGTGCTCAAAGTTCAGTTCCAATAATTTT CCTAGTTACAGATGGAACTGTTGAAGATGAGAGGCAAATTTGTGATTTGGTAAAGAATCATATGACCAATGGAGAGTCAA TATGCCCCCGAGTTTACACTTTTGGCATAGGCTCATTCTGCAATCACTATTTCTTGCGAATGCTTGCTGCAATTGGTAGG GGCCAATATGACGCTGCAGTGGATGTCGATTTGGTTGAGCCTCGAATGCTGACGTTGTTTGAAAAGGCATCATCTCTCAT TCTCGCAAATATCAAAATGGATGTATTGGATGATATTGATCAACTTGAGGTATATCCTTCCCACATTCCAGATCTTTCAA CAGAGGGTCCATTGATTTTATCTGGCAGATATAAGGGAAATTTCCCCGAAACTGTTAAAGTCAAAGGTATCATGGCTGAT TTCAGTGATTTTGTAATAGATATGAAGATTCAAACAGCTAAGGACATACCTGTACAAAGGGTTTGTGCAAGAGATCAAAT AGAGCATCTTACTGCTCAAGCATGGCTATCCGAAAACAAACAATTAGAACAGCAGGTTGCCAAACTAAGCCTGCAGACTG GCTTTATGTCTGAGTATACACGTATGGTAGTACTTGAAAATGATCATCTAAAGAAAGCCAAAGAATCAGCTGGTGGGAAA GAAGTGTCAAAAAAGAGTCATGCTCCACACGAGGCAAACACAAACGTACAGGGCCAGAGAATGATTTTACTCCCACACAT AGGTGTCGGCTTTGGCAACTTGACTGCAACTGCTGAAAACACTCCTCCAGGAGCTGAAAAGATGCTTGAAATGCCCGAAA TCTTTAAGGCGGCCTCAAATTGTTGTAGCACCTTGTGCAGTTACTGCTGTTGCATGTGCTGCATCCAGTGCTTTACCCGA ATGAACAACCAATGTCTCACTGCATTGACTCAGCTTTGTGTTGGTATAGGATGCTTCGGCTGCCTCACATGTTGTTCAGA CATATGCTGTGGTGGAAACGATAGTTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0323300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAEEFSRAVDDGLKLSKRIYFGKDRAVAPPKLPAPMARSPDALLPTAPMVYAVIYDPGIVDNPDIPSYQPHVYGRCDPPA LIPLQMNGVEMEIDCYLDTAFVTVSGSWRLHCVMGSRACDCRIAIPMGHQGSILGVEVTAHRKTYSTQLVVMEDNSVNEN ATIAQQGGFLKSNIFTLTVPQIDGGTNLSIKIQWSQKIVNCNGELTLNVPFTFPEFVTPAGKKMSKKEKIQINVEAVAGS ELLCRTMSHPLKEMRRDAGSIGFLYDSQVLSWSNTDFSFSYAVSSSRIDGGVLLQSASVHDFDQREMFYMYLSPGDIHRK KVFRKDIIFVIDISGSMQGKLIDDTKNALSSALSKLNPDDSFNIIAFNGESYLFSKSMEPASSDAVEKATEWMDVNFVIG GGTNILRPLNTAIEMLSGAQSSVPIIFLVTDGTVEDERQICDLVKNHMTNGESICPRVYTFGIGSFCNHYFLRMLAAIGR GQYDAAVDVDLVEPRMLTLFEKASSLILANIKMDVLDDIDQLEVYPSHIPDLSTEGPLILSGRYKGNFPETVKVKGIMAD FSDFVIDMKIQTAKDIPVQRVCARDQIEHLTAQAWLSENKQLEQQVAKLSLQTGFMSEYTRMVVLENDHLKKAKESAGGK EVSKKSHAPHEANTNVQGQRMILLPHIGVGFGNLTATAENTPPGAEKMLEMPEIFKAASNCCSTLCSYCCCMCCIQCFTR MNNQCLTALTQLCVGIGCFGCLTCCSDICCGGNDS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46503:SF7
1 754 754 0.0 –
PANTHER
PTHR46503
1 754 754 0.0 –
CDD
cd01461
323 497 175 2.67455E-65 –
SMART
SM00327
324 504 181 1.4E-14
IPR002035
Gene3D
G3DSA:3.40.50.410
324 503 180 5.6E-31
IPR036465
Pfam
PF13768
325 483 159 1.1E-16
IPR002035
SUPERFAMILY
SSF53300
325 483 159 1.05E-27
IPR036465
ProSiteProfiles
PS50234
326 519 194 14.867
IPR002035
Coils
Coil
592 612 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0323300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…