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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0328700 |
| Transcript ID | LotjaGi4g1v0328700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT3G01750.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q5F478|ANR44_CHICK Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B; TrEMBL-Plants: tr|A0A0B2RRD2|A0A0B2RRD2_GLYSO Ankyrin repeat-containing protein; Found in the gene: LotjaGi4g1v0328700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70759447..70763160) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATCCTTTTTTATCTTCATGTGTCCGGCTAAATGAGTGCTCCATGTCATGCCACACTTGACACAAACCTCGAAATTT CCTCTACTGAATGAAATCAAACAAACAACCACAATCATAGTGGGGTCAATGGAATTACAACTTACCATAATCTAATAAAA TAAAATACTCTTATTCTGTGAGCTCACGGACCAGAGAATCTCAATCTTTCTAAGCCTTCTTTTTAACTTATTCTCCACTA TAGATAACAATTAACAAGTATCCTCCATCACAAATCCAGCATTAGGGACATTTTCCTTTTGTCATTTAACATCCTGCACC AACTATTTATAGTATATGCCAACATGTTGGTTCCTTGTATACTTCACTGTTTACAAGGCTAATTCTTAATCTCACTTCCT AGAATTTTCATCCCATTATAGCTTTTCAACAACTTTCAATCCAAGAGAATAAACACTTACACAAAGAACTAAAGCATATC TTCACTTTACACTTTTAAGGGTGTCTGAAAAACCAGTTTTTTCTTCTGCTTGAAAGTGGAAATTGAGCATAGAGGTGTGA AGTGAATCATGGCTCCCTCTAACTTCCCTCTTCGTTGGGAGAGTACAGGAGACAAGTGGTGGTATGCATCTCCTATTGAT TATGCTGCTGCAAATGGTCTATATGATCTTGTCACTGAGCTTCTTCACCTTGACACCAACCTCCTCATCAAGCTCACTTC CCTTCGAAGAATCCGCCGCCTTGAAACCGTGTGGGACGATGAGGCTCAGTTTGAAGATGTTGCCAAGAACCGCTCCAAGG TTGCAAGGAGTCTTCTGAGAGAGTGTGAGACAGTAAGAGGGGACAACAAGAACTCTCTCATGCGTGCCGGCTATGGCGGG TGGCTTCTCTACACTGCAGCCTCGGCCGGGGATGTGGAATTTGTTCAGGAGTTGTTAGGAAGGGACCATTTGATTGTGTT TGGTGAAGGAGAGTATGGTGTGACTGACATGCTTTATGCTGCAGCCAGGAGCAAGAACTCTGAAGTTTTTGAGATTCTGC TTGGTTCTGCCCTCTCAAGAAAAGAGTGCCTTAGCAGGCTTGGAGAAAATTTTGAAGAGAATTTAGATGGAGGTGGTGGG GTTTTCAAGAGGGAGATGGTGAACAGGGCAATTCATGCTGCTGCTAGAGGAGGGAATTGGGAGATGCTGAAGCAGCTTCT GGGAAGTGTTTCTGAGATTTTATCTTATAGAGATGCTCAAGGATGTACAGTCTTGCATGCAGCAGCTGGTAAAGGGCAAG TTGAGGTGAGGCAGATAACTTATAGCTCGTTTCTCATTTTTTAGAATCAATTATGGAACCCATAAGCTACGCACAGAAAG ATTTAGAAAGATAATTAAGTCTGGTTTTAGAATCAATTGTTGAAAAAATTTCAAGCATGCACTTAATGTGCTTGTAGACA ATTCAGGAGCCTTACTTATTTTATAGCATTGTTATACATAGAAGTCATGAGGAACTAGGACATGGATATCAGATTCTTGA TAATTTGTATGTAGTTTTAAAGATGAGGGTTAAATGAAATATTTTATTTAGTACACAGTTTAAATAACACCATACACATT TGGGTGAATTCCTCTAAGTATGTGACTGCAGTAAGCCTCATAACCAATTCTGATCGAGTAAAATAATTTTGGATGACAAT ATAGATGTTTATGAATGATTGTGTAGAATTGATTTTGTTAGAAGCCTGAGAGAGTAGCCTCTGAGTTTATGACATAGTCA AGTCTGAGATTTTACCACTGGATTGTTTGACCCCCTTTTGTCAAAATCAATTTTATCCAAAATCAATTGGGACAACGTTG ATCCAAACGAGCATCTCAATGCCTTATTCCAATTGACCCCTTTTGACACCTGACTAGAGATAGAAACCATAGAATCTTGT ATACATAGACTCAAAATCAGAGTTAATGTTAAATATTTTGCTTAAAACAGGCAACTTATTGTATGACTACCACTTACCTT CACATTTGATGCTTTAGGGAACAGTTAATGCTACAGAATTTCAGCATGTCCAAACTTACTTCTGCCATTTTCATTGGGTT TAACAAATTAATTGTTACTTACTTTTACTATTTTAATGATGCAGGTGGTGAGAAATCTAATTTTATCCTATGATATCATC AACTCAACTGATGCTCAAGGAAATACAGCATTACATGTGGCTTCTTACAGGGGTTACTTACCTGTGTTAGAGATTCTGAT CCAAGCATCTCCCTCATTAACAACATTGACCAATCACTATGGGGATACTTTTCTTCACATGGCAGTGGCTGGTTTCAGAA GCCCTGGTTTCTGCAGAATGGAAAAGCACACTGAGCTCATGAAGAACCTGCTAAGTGAGAAAATTGTGAACATGAGGGAC ATCATCAATGTCAGGAACAATGATGGAAGAACAGCTCTTCATGTAGCTGTAATTCATGATGTCCAATGTGATGTGGTGGA ACTATTGATGTCTATTGCGTCTGTTAATCTGAACATTCGCGATGCTGATGGGATGACTCCCCTGGATCATCTGAAGCAAA GACCAAGATCAGCATCTTCTGAAATTCTAATCAAACAGTTGATTTCAGCTGGAGGAATCTCTGACTTTTCTCAAGATCAT ATAGCAAGAAATTTTCTTGTTAGTCGTCTGAAAAATCACGGTTTCAGAGGTAGCCCTGGAACTTCATTTAGAATCTCAGA TGCTGAGATATTCTTATACACAAGCATTGAGAATGAGAATTCATCTGAGGTTAATTTTGATCATGCAAGTGTAGAATCAA ACTCATGCTCAAGTGAACTAAACAATTATGACTCAGACAATTCATCGAACATTTTCAAGTCATGTTCTGCCAACACTGCT ACAAGGCGCTTAACGAACCTTCTCCAATGGCCAAGGAGAAGAGAATCAAAACCAGCTACCTCAGTGTTAGAAGATGATGA TTCAGTGGATTCTTTCAATTCAAGGAAAAAATTGGAAGACTTTCCAATTCCATTAAGGCAAAGATACTCAAAACAGTGCT CTCTTCCAAACAACAAGAGAACACTATCTATAAAGACTTTACTTCCAAGTCCATCAGCAAAAGAATACTTCACTGCAGGG TTAATGCAGGGTGTGATTAAGGTAAAGCCACATGGGCATGTTTTTTCTCATTCAATTTCTAGTCCTTTTCAAGAGTTGTC TATTTCTTCTCATTCTCCAAACAATAAGCAAAAATGTGGTGCTACAATGGGAACCTCTTGCTCCAATCAACCAATGAAAT ACAAGCAGAGCCCCATCAGTAAGAAATTGATGAACAGGTATTTTTCTTTTGGAGCACATGGCCAAGCTAAGGAGGATGGA AGTAGTAGCTGCACAATAACAGATTCAAGTTATAAGAGTTCTGGTTCTTTAGTTGCATAAATGTTATATATGATGAGCCA TTTTGTAAAAAATAATACATTCTCACTCAAAGTTGTGATGATCAAATGTTTGAAAAAGTTTTAGAATATGTATATAGTGG TGGTCATTTCATTTTACATGACAGAATCATGTAAAATTTTTTTTAGCTCAAATGTATTGAGGGACGATAAGTGATAAGTG TGACTAATTCTCTTGCCGTGAGTGCTTAAGAGAGGTTTATCATTTCTTATATAAGGGTTATCTTGGTTATATATCTAGAG AGAGACTTCTCAACACCCCATTCAGGCTAAGGGC
CDS sequence (LotjaGi4g1v0328700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCCTCTAACTTCCCTCTTCGTTGGGAGAGTACAGGAGACAAGTGGTGGTATGCATCTCCTATTGATTATGCTGC TGCAAATGGTCTATATGATCTTGTCACTGAGCTTCTTCACCTTGACACCAACCTCCTCATCAAGCTCACTTCCCTTCGAA GAATCCGCCGCCTTGAAACCGTGTGGGACGATGAGGCTCAGTTTGAAGATGTTGCCAAGAACCGCTCCAAGGTTGCAAGG AGTCTTCTGAGAGAGTGTGAGACAGTAAGAGGGGACAACAAGAACTCTCTCATGCGTGCCGGCTATGGCGGGTGGCTTCT CTACACTGCAGCCTCGGCCGGGGATGTGGAATTTGTTCAGGAGTTGTTAGGAAGGGACCATTTGATTGTGTTTGGTGAAG GAGAGTATGGTGTGACTGACATGCTTTATGCTGCAGCCAGGAGCAAGAACTCTGAAGTTTTTGAGATTCTGCTTGGTTCT GCCCTCTCAAGAAAAGAGTGCCTTAGCAGGCTTGGAGAAAATTTTGAAGAGAATTTAGATGGAGGTGGTGGGGTTTTCAA GAGGGAGATGGTGAACAGGGCAATTCATGCTGCTGCTAGAGGAGGGAATTGGGAGATGCTGAAGCAGCTTCTGGGAAGTG TTTCTGAGATTTTATCTTATAGAGATGCTCAAGGATGTACAGTCTTGCATGCAGCAGCTGGTAAAGGGCAAGTTGAGGTG GTGAGAAATCTAATTTTATCCTATGATATCATCAACTCAACTGATGCTCAAGGAAATACAGCATTACATGTGGCTTCTTA CAGGGGTTACTTACCTGTGTTAGAGATTCTGATCCAAGCATCTCCCTCATTAACAACATTGACCAATCACTATGGGGATA CTTTTCTTCACATGGCAGTGGCTGGTTTCAGAAGCCCTGGTTTCTGCAGAATGGAAAAGCACACTGAGCTCATGAAGAAC CTGCTAAGTGAGAAAATTGTGAACATGAGGGACATCATCAATGTCAGGAACAATGATGGAAGAACAGCTCTTCATGTAGC TGTAATTCATGATGTCCAATGTGATGTGGTGGAACTATTGATGTCTATTGCGTCTGTTAATCTGAACATTCGCGATGCTG ATGGGATGACTCCCCTGGATCATCTGAAGCAAAGACCAAGATCAGCATCTTCTGAAATTCTAATCAAACAGTTGATTTCA GCTGGAGGAATCTCTGACTTTTCTCAAGATCATATAGCAAGAAATTTTCTTGTTAGTCGTCTGAAAAATCACGGTTTCAG AGGTAGCCCTGGAACTTCATTTAGAATCTCAGATGCTGAGATATTCTTATACACAAGCATTGAGAATGAGAATTCATCTG AGGTTAATTTTGATCATGCAAGTGTAGAATCAAACTCATGCTCAAGTGAACTAAACAATTATGACTCAGACAATTCATCG AACATTTTCAAGTCATGTTCTGCCAACACTGCTACAAGGCGCTTAACGAACCTTCTCCAATGGCCAAGGAGAAGAGAATC AAAACCAGCTACCTCAGTGTTAGAAGATGATGATTCAGTGGATTCTTTCAATTCAAGGAAAAAATTGGAAGACTTTCCAA TTCCATTAAGGCAAAGATACTCAAAACAGTGCTCTCTTCCAAACAACAAGAGAACACTATCTATAAAGACTTTACTTCCA AGTCCATCAGCAAAAGAATACTTCACTGCAGGGTTAATGCAGGGTGTGATTAAGGTAAAGCCACATGGGCATGTTTTTTC TCATTCAATTTCTAGTCCTTTTCAAGAGTTGTCTATTTCTTCTCATTCTCCAAACAATAAGCAAAAATGTGGTGCTACAA TGGGAACCTCTTGCTCCAATCAACCAATGAAATACAAGCAGAGCCCCATCAGTAAGAAATTGATGAACAGGTATTTTTCT TTTGGAGCACATGGCCAAGCTAAGGAGGATGGAAGTAGTAGCTGCACAATAACAGATTCAAGTTATAAGAGTTCTGGTTC TTTAGTTGCATAA
Protein sequence (LotjaGi4g1v0328700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPSNFPLRWESTGDKWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLETVWDDEAQFEDVAKNRSKVAR SLLRECETVRGDNKNSLMRAGYGGWLLYTAASAGDVEFVQELLGRDHLIVFGEGEYGVTDMLYAAARSKNSEVFEILLGS ALSRKECLSRLGENFEENLDGGGGVFKREMVNRAIHAAARGGNWEMLKQLLGSVSEILSYRDAQGCTVLHAAAGKGQVEV VRNLILSYDIINSTDAQGNTALHVASYRGYLPVLEILIQASPSLTTLTNHYGDTFLHMAVAGFRSPGFCRMEKHTELMKN LLSEKIVNMRDIINVRNNDGRTALHVAVIHDVQCDVVELLMSIASVNLNIRDADGMTPLDHLKQRPRSASSEILIKQLIS AGGISDFSQDHIARNFLVSRLKNHGFRGSPGTSFRISDAEIFLYTSIENENSSEVNFDHASVESNSCSSELNNYDSDNSS NIFKSCSANTATRRLTNLLQWPRRRESKPATSVLEDDDSVDSFNSRKKLEDFPIPLRQRYSKQCSLPNNKRTLSIKTLLP SPSAKEYFTAGLMQGVIKVKPHGHVFSHSISSPFQELSISSHSPNNKQKCGATMGTSCSNQPMKYKQSPISKKLMNRYFS FGAHGQAKEDGSSSCTITDSSYKSSGSLVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 670 | 670 | 2.2E-249 | – | |
| PANTHER | 1 | 670 | 670 | 2.2E-249 | – | |
| Gene3D | 13 | 171 | 159 | 3.0E-8 | ||
| SMART | 18 | 47 | 30 | 300.0 | ||
| SMART | 102 | 131 | 30 | 1100.0 | ||
| SUPERFAMILY | 107 | 395 | 289 | 7.74E-38 | ||
| SMART | 136 | 166 | 31 | 1100.0 | ||
| Gene3D | 186 | 409 | 224 | 2.5E-37 | ||
| SMART | 190 | 219 | 30 | 420.0 | ||
| ProSiteProfiles | 190 | 410 | 221 | 29.176 | ||
| Pfam | 195 | 280 | 86 | 2.5E-12 | ||
| ProSiteProfiles | 224 | 256 | 33 | 9.003 | ||
| SMART | 224 | 253 | 30 | 0.19 | ||
| SMART | 257 | 286 | 30 | 0.0067 | ||
| ProSiteProfiles | 257 | 289 | 33 | 10.553 | ||
| SMART | 291 | 331 | 41 | 11.0 | ||
| SMART | 339 | 370 | 32 | 0.011 | ||
| Pfam | 339 | 372 | 34 | 0.0022 | ||
| SMART | 374 | 409 | 36 | 1900.0 | ||
| MobiDBLite | 597 | 623 | 27 | - | – | |
| MobiDBLite | 645 | 670 | 26 | - | – | |
| MobiDBLite | 647 | 670 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0328700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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