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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0329100 |
| Transcript ID | LotjaGi4g1v0329100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acid phosphatase/vanadium-dependent haloperoxidase-related protein; TAIR: AT1G67600.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein; Swiss-Prot: sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD; TrEMBL-Plants: tr|I3S4M5|I3S4M5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0329100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70787475..70791302) extracted from Lotus japonicus Gifu genome v1.2.
TATATCTAAAAGCTTAGGTGCGACCGTTAGTTAGCATTTGGAACAAGCAACCAACCAAACAGTTAGTTAAGACGGCATCT TCTCAAATGAATCTCTCTTTTGTTCCCACTCAACATACCTACCAGCTTCCACATCCTTTACTAATTCTTCATAACTTTCA GCAATAGCCATGGCTATGATGGGTGAGACTGAGGTTGCAGCCATGCATTCTTCAACTTCCTTCTCATTGATCTCTGTCAA TTACCCTCTCATTTCCGCCCTCGTTGCTTTCGCTCTTGCCCAAGGCATCAAGTTCTTCACCACCTGGTTGGTTGGTATTC TCTCTCTTTTTTTCTCCTATGACTCTTAAATCCATATGACTCTTATATTATGACTCTTAAATCCAATTTGATCTTGTTGT TATGGTTCTATGATTTAGGACATGAGAAGCTTTTAACAAATAACATAATTAGAGTCAACTTATAGAATGTTTGAAAATTC TTGTATAATTGATTCTAAACCCAAAATCAATTCTAGGAAGAAGCTTCCTCTGGGTAGTTTTTAGGTACCAGAATTGATTC CGAGGAAAGAGAAGATGATATTTGGATGCAGTAGTTTTTTTTCTTCTCTTTAATTGGTGTAAACTCGTTCGGGAAACTAT GACCGTTCCTCCTAAGAGATGATCAACCTGGGGTTTAAATTTGTGTAGTCACCCTTACAGGATCTAGCTTCTCTACCACT AGATGACACGTTGTTGGTGGATGTAGTAGCTTTGGAGGGCAAGGCCGCAAGGATTAGTTTTTTTGTTTGTTTTTAAATTT AGAGAATTATATAATAGTGGTTGCTTGAGTTGATAGTGTCTCATTTTGTTCCTCCCTTTTTAAAGTTTTTTACATAAATA AAATGTTTGAATAAATTAAAATGAAAAGCCTCCTCCATCCAAACAAAAAGTGTCTTAATTGAGAAAAGTTTTTAGTTTCA CTTATGTAAGAAAAATGGTGTAAACAAGCAGCAACGAAACATTAAACAATTTTCTCAATTAAAACAAGCCCACCCTTGAT GTTTCTTAGATAATGCAGGTTTAAGGAAAGAAGATGGGATATGAAGCAATTAGTAGCATCTGGTGGAATGCCATCATCTC ATTCAGCAGTTGTCACTGCTCTTGCAGCAGCCATTGGGTTCCAAGAAGGCTTTGGAGGACCTCTTTTTGCAATTGCCTTG GTCTTAGCTTGTATTGTATGACTTCTCTTTTTGGTTCTTCAAAATTTGTGTAGAGGCCTCATAAAAGACTTGATATTTTG TTTACTATGATGTGTGATATAAGGAATATTCAATCTGATGTCCTATTTTACTTGTTAGCATGTTAGTATCAACTTTTCTT TCATGATAGTAAATTCTGGACCCCAGGAGCTACTAACAAAAGTTTCTCCCCAGAATTGATTCTGACTTTACAACCAATTG TAGAGGTTTTTCCAAATATGTACTTAGTTACTGTTAAGAAAGCATCTGATGTCCTACAAACAACTATAGCATCTTTGGTA AAAACATATTTTGGGAATTTCAAAAGCCCTTTCAGGAAATTATGGAAAAAATGATTTTTTGGCTGCAAAAGATGTACTAG GTTAGATATGAGAAATTAATGTAATGTTGTTTCATATGGCTCTGTAAATTTCTGATGAATAGATTGCTGGCAGGTGATGT ATGATGCCACTGGTGTAAGGTTGCAAGCAGGACGCCAAGCAGAGGTTTGATGTTTATGCTACTAATTTTTTCACCTATGC CATATTTTCCCCTTTATTTCTATGCACATTTCTGTCTTATATAGATATGGAATTCCAAAGCCACTAGGATTGAGCTAGTT GGTAGTGTTTTGGGTAGTTTGAACCAAAAACAAATGTTACTGAAGACTTTTTCTGTTTGCCTGTGATTGCTGTGAAATAA AACCTCATTCTTTTGTTTTGGATTTGTTTCAATGTATTTTATTATACTAAATTTGAATGGGTGAAATTTTCCCAGGTTTT AAACCAAATTGTGTATGAACTCCCAGCTGAGCATCCTCTGGCTGAAAGCAAACCGCTTCGCGAACTTCTTGGGCATACAC CTCTTCAGGTTACCATTTTGCATTTGATTGTTTCTTATAATTATTTGATGGATCTGTGTTTAACCAATGGAATTTACTGC ACCAGAAGATGGCAGTTTTTGCATTATTAGACTTTTTGCACTGGTTCCATAACTTTGTTACTAGACATTCTATGTAAATG TTGTGGAGAAGCTGACAGGAAATCAGTTAATGTGGTATGTGTAAAAAGAAGGTCTTTAGACGCATTGGTGAGAATGGTTG ATAACATAGTATTTAGACTCGTAAAGAGGGGTAGATGGAAATAAAAAAGAACTTGGGAGGAGATTGTTAAAAATGCTTAT TATTAATAATACTCCCCATAACCTGGTTTTTTATCGAGTTCAATTGCGTAGTGTAATTCATATAGTCACCCTCACTTGGT GGAATAAGACTTTTGTTGTAGTAGTTGTTATTCTATATGAGCATTTCTAGTTCCTCCTACATCTGTGAATGCTATATTCT TAAGAGATTATTCATTCCCAAGTCTGTTTTTCTAGGAATTATTTTAGAAAGCTGGAAACAAACACCCCCTGAAGTTTAAA AAAGTAGGTTAACCACGGTATTATACCAAATGCGTGTTTGGATCAGCGTTGTTCAAAAAATTGATTGTTGATTGTAGTGC CAACTCTTTTACCACTGATGATTCTCATTCCTGCTCTCCTTCATTCTGCAGGTCATTGCTGGTGGGTTACTTGGGCTCTT AACAGCAGCAATTGGCCTTCTAGGAAGAGTGATTACTAGTTAAAATTGAGGCTTCTTTTCTTGACATTCCTAACAGGTGC AATTTCAGTTCATTCCATGCCAATGGTACGCAAGTTGAACGCATCAGCATTTTCATGCAGAAATGCACTTCAACCTCTCA AGTCAGCAGTAGAATTCAAAACAGAATTTGTAGACTCCAGTGTTTGATGCAATGGAAGTATCTATCTCATAGAATCTTTT ACTTGCTAGAGTCGCAGGGTTTAAGTTTGCATACTCATTCATACTCACTTTGAGATAAAAAAAAAAAAAAAAACGAAACT CCTTTTATGAATTTGGATAACAATCCGTTCGAGCTTGGTTTCACATATATAGACTAACAATAAGTTTAATATCATCATGG ACAATCACATGTGGATATCTTCTATTAACCTCAAGTCCTGAAGCATTTAATTTCAGGTAGATATGGTAAATGAAGACTTG AAAATGGCATTAAGAACACTTTAGTCTATAGTGGTAATAACTAATAACCAGACATGCCATATTCATTGTCTCATTGAGGC CCTTGGAGGTTGGTATTCGGGTCGCACAACCCGTAATAAACGGGCCGGTTCAAGTTAATCTGCATAATAAATGATTCGGA AGAAGAGATGTCAGCCCCCTACCAAAGCTTGTGGATCACTGGGTTGCTCCACATAGAAATGAATTTAAAAAAAAAAAGCT AAAATAAGTAGATAAAAAAAGTTATGGTTTCTATCACAGTCACGTCAAGGGTTTGGAAATATATTTATCCAAAAAAGTTG GTACACTATTCCGTTATAATCATTGCAGCTTCCACTGGACATGGCACTCTTCCTCCCACGTCTCACTCTCCCTCAAAATT TGCTTATTGATATCTATCAGACTTCATCACCATCACAACCTCTTGCAATAATTCAACTTCATAAATTCACAACTACCCTA CTTCAGAACTTGTATATATCTCAGATATATGTACTCGAACCCAAAGAAATATGATACATTAATTATGG
CDS sequence (LotjaGi4g1v0329100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATGATGGGTGAGACTGAGGTTGCAGCCATGCATTCTTCAACTTCCTTCTCATTGATCTCTGTCAATTACCCTCT CATTTCCGCCCTCGTTGCTTTCGCTCTTGCCCAAGGCATCAAGTTCTTCACCACCTGGTTTAAGGAAAGAAGATGGGATA TGAAGCAATTAGTAGCATCTGGTGGAATGCCATCATCTCATTCAGCAGTTGTCACTGCTCTTGCAGCAGCCATTGGGTTC CAAGAAGGCTTTGGAGGACCTCTTTTTGCAATTGCCTTGGTCTTAGCTTGTATTGTGATGTATGATGCCACTGGTGTAAG GTTGCAAGCAGGACGCCAAGCAGAGGTTTTAAACCAAATTGTGTATGAACTCCCAGCTGAGCATCCTCTGGCTGAAAGCA AACCGCTTCGCGAACTTCTTGGGCATACACCTCTTCAGGTCATTGCTGGTGGGTTACTTGGGCTCTTAACAGCAGCAATT GGCCTTCTAGGAAGAGTGATTACTAGTTAA
Protein sequence (LotjaGi4g1v0329100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMMGETEVAAMHSSTSFSLISVNYPLISALVAFALAQGIKFFTTWFKERRWDMKQLVASGGMPSSHSAVVTALAAAIGF QEGFGGPLFAIALVLACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESKPLRELLGHTPLQVIAGGLLGLLTAAI GLLGRVITS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 8 | 163 | 156 | 2.4E-79 | ||
| PANTHER | 8 | 163 | 156 | 2.4E-79 | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 20 | 37 | 18 | - | – | |
| Pfam | 24 | 156 | 133 | 1.0E-49 | ||
| Phobius | 38 | 56 | 19 | - | – | |
| TMHMM | 57 | 79 | 23 | - | – | |
| Phobius | 57 | 78 | 22 | - | – | |
| Phobius | 79 | 83 | 5 | - | – | |
| Phobius | 84 | 103 | 20 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 104 | 146 | 43 | - | – | |
| TMHMM | 145 | 167 | 23 | - | – | |
| Phobius | 147 | 167 | 21 | - | – | |
| Phobius | 168 | 169 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0329100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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