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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0330100 |
| Transcript ID | LotjaGi4g1v0330100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Seed maturation PM36-like protein; TAIR: AT3G16990.1 heme oxygenase-like, multi-helical; Swiss-Prot: sp|Q9SWB6|TENAE_SOYBN Probable bifunctional TENA-E protein; TrEMBL-Plants: tr|G7JMU3|G7JMU3_MEDTR Seed maturation PM36-like protein; Found in the gene: LotjaGi4g1v0330100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70932761..70935464) extracted from Lotus japonicus Gifu genome v1.2.
CTTGGAAAGACACCATCTCATAGAGCCCAATAAGCTTGACATGTGTAGAGGTGCATGCCTACAAAGCTACTTGTGGATTT CACTAGAACTTGGCCTGCCCCACTTACATTTGAACTCTTTTTAAGGCCCACAAAATAATCCTCCTCAGTTCTCACGATAC CTCATTGTTACTAGTCAAACTGAAAGATAATGGCGAGTGAGACACTGAGAAGAAGCGACAACATGGCGGAGAAGATGAAA GTCGAGGAGAAGAAAATCGGCATGATTGAAACTTGGTTGAGGAAGCACCGTATTCACTACGACGCAGCCACCAGACACCC TCTGATTCTTAGCATTCGTGATGGCACCATACACATCAATTCCTTCAAAACATGGCTCGTAATAACCTTCTCATTTTTTT CTCTTCTTTCTCTGTTGTTAGTTATAATTTTCATTATTATTTGATACAATTGAGCTGCTCTTGCCAAGATTCATCAATTG TTTGTAATTTTCAACTAAGTGGTTGCAATATGAATTAATTAATTTTCATCATAAGCACTGAAAGGGCCAACTACATACCA TAAGTTTACACCCTAATCGAAAATTTTAACTAATTTTTGAGTGGGCAACAACCTCTCTAGATTTTTCATTTTTGAGTGGG GGCAACAAGCAAAAGTATGGAGGAGTAAGTGCTCCCATACGTGTTTAACATGAAGGGAAAAACTCTCATTATATAAGGCA GAATGAAGAATGAGATAGAAACTTGTCCAATGTGGGACTAAAAATAGTTGAATAATGAACCATTTTAATGTGAAATTTCA ATTTTTTATGTTAAATTTTTATGTGTTTTTCACTATTCGAATGTTGGCAGAGGGGATTATGTTAGAACATAAGCATGGTT CAATATGAAAGGCCAAACTATCACTATGATTCTTTCTTTATGTTATACAGGCTCAGGATTACCTTTTCGTTCGAGAGTTT GTCCCATTTGTTGCTAGTGTGCTGATAAAAGCTAGCAAGGAATCGGATGACAGTGCTGACATGGAAGTCATATTAGGGGG CATGGCTTCTCTGGGGGATGAAATATCATGGTTCAAGAGAGAAGCCAACAAGTGGGGTATTGAACTTTCTGACGTTGTTC CTCAGCAGGCAAATATAAACTATTCTAGGTAGGTTTGTGTATTAAACATTTGTCATCAAACTCAATTCATGAATTATGAT ATCTGCTATTACAATTTAGTTTGGATCATGACGTGATTAGAACTGATGGAAGAAGAAGCTTTTGATTGCTGGGGGAATAT TTGCCAATATGGGAAAGTGGAGGTTTTAATTTGAGGCTAGAAGCCTAAGACATACATAATTTTGGAACCAGAAGAGCTGG AAAACATGAATTTAATCTTGTAGCAAACATAGAATTAAAAAAGATCACACTATGCCAAACTTAATTAGCTATGGACCCGT GGGTCTAGTCTCTAACACTGGATATGAATATGATGATGAAATGATTGATTTTACAGGTTAGGCCTTTTCCTCTGCCTTAA TATAGTGGAAGAAAATAAGTCTAGAGTTCTTGTTCCTTCAACATCATATAGCAGCTATGCTGTCATGATACAAATTACGT ATAACATGTTCAACTTGAATCAATTTTAACAACCAGAAACTACTCGGGTTTTGGATAACTTTTCTTTCCTCATAATCAAT TCTATTCTAACACCCAGGAGAGTGAATCGGTTTTTATTTTGGTTGTAGAATCAATTGTCCTACACATCCCATTAGAAGCC TTGGCGAAATCCTATTCCTTAAACATGATATGGCAGCTATGCTCTCATAATGCCATCAATATTTTGAGAAGCCACACATT AAACATGGATATTTGGGGTTTTAGTCAAATTATATGCTACTTTTGCCTCCAAAAAATGCTTGTATTGTGACTTACTTAGA GGAAGCAATTAAATGTGACAGGTTACTGGAAAGTTTAATGAGGTCAGATGTGGAATATACTGTGGCTATGACAGCATTTT GGGCCATTGAAGCAGTGTACCAAGAGAGCTTTGCCCACTGCATTGGAGAAGGCTCCAAAGCCCCACCGGAACTGGAGGAG ACTTGTGCAAGATGGGGCAATGAGGGTTTTGGTCAGTATTGCCAATCTCTGCAGAAGATTGCCAACCAGCGCTTACAAAA GGCTTCTGATGATGAGCTCAAAAAGGCTGAAGTTGTGTTCCTCAGTGTTCTTGAGCATGAAGTTGAGTTTTGGAACATGA GCCGTGGAAATGTTTGATTTTGTTCATGATGAAAACCTTTATGTTTGTGTGAAAAATGGTCAAAGCCTTGTTCTGTTTTA CCATTTACAGAGACTAAAGTACTGTGTGGATCTTTATTTCTTAGAAGGATACAGTAAATTAGAACTAGGAAAATAATAAA TGAAAATGTTGAAAACACTCCTTAGCATCTGTAACTTGAGTTCTAAATGTAATTAGAATTTGGATCCCCTCTTGTTATGT CTCAAACATGCATAGTTGTAGAAATAATTACACTTGTAATTTTATTTTGTGTACGTACGACAAGTTTACATCCTAATTTG AATTTTCGTTTTTTTAGTGGGAGAAACCACTACTCAGTAAGATTTATTGAGGAACTCCCTTTATATAGGGCAAAATGAAG AATGATAGAGTAACTTGTCCAATGTGGGACTAAAACTAATGTGAAATTTCAATATAAGCATTGA
CDS sequence (LotjaGi4g1v0330100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGTGAGACACTGAGAAGAAGCGACAACATGGCGGAGAAGATGAAAGTCGAGGAGAAGAAAATCGGCATGATTGA AACTTGGTTGAGGAAGCACCGTATTCACTACGACGCAGCCACCAGACACCCTCTGATTCTTAGCATTCGTGATGGCACCA TACACATCAATTCCTTCAAAACATGGCTCGCTCAGGATTACCTTTTCGTTCGAGAGTTTGTCCCATTTGTTGCTAGTGTG CTGATAAAAGCTAGCAAGGAATCGGATGACAGTGCTGACATGGAAGTCATATTAGGGGGCATGGCTTCTCTGGGGGATGA AATATCATGGTTCAAGAGAGAAGCCAACAAGTGGGGTATTGAACTTTCTGACGTTGTTCCTCAGCAGGCAAATATAAACT ATTCTAGGTTACTGGAAAGTTTAATGAGGTCAGATGTGGAATATACTGTGGCTATGACAGCATTTTGGGCCATTGAAGCA GTGTACCAAGAGAGCTTTGCCCACTGCATTGGAGAAGGCTCCAAAGCCCCACCGGAACTGGAGGAGACTTGTGCAAGATG GGGCAATGAGGGTTTTGGTCAGTATTGCCAATCTCTGCAGAAGATTGCCAACCAGCGCTTACAAAAGGCTTCTGATGATG AGCTCAAAAAGGCTGAAGTTGTGTTCCTCAGTGTTCTTGAGCATGAAGTTGAGTTTTGGAACATGAGCCGTGGAAATGTT TGA
Protein sequence (LotjaGi4g1v0330100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASETLRRSDNMAEKMKVEEKKIGMIETWLRKHRIHYDAATRHPLILSIRDGTIHINSFKTWLAQDYLFVREFVPFVASV LIKASKESDDSADMEVILGGMASLGDEISWFKREANKWGIELSDVVPQQANINYSRLLESLMRSDVEYTVAMTAFWAIEA VYQESFAHCIGEGSKAPPELEETCARWGNEGFGQYCQSLQKIANQRLQKASDDELKKAEVVFLSVLEHEVEFWNMSRGNV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 238 | 227 | 8.8E-115 | – | |
| PANTHER | 12 | 238 | 227 | 8.8E-115 | – | |
| PIRSF | 13 | 239 | 227 | 2.4E-29 | ||
| Gene3D | 20 | 238 | 219 | 2.1E-53 | ||
| Pfam | 31 | 238 | 208 | 2.2E-50 | ||
| SUPERFAMILY | 40 | 236 | 197 | 1.88E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0330100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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