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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0333600 |
| Transcript ID | LotjaGi4g1v0333600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I3SL42|I3SL42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0333600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71276559..71279169) extracted from Lotus japonicus Gifu genome v1.2.
CAGAATCAGTCTCGTTTCTGAGCTTTCACTCACGCCCCTCTTCTCGGTGAGTTTCATTGCTTTTCCATGTTCAATCACTT CAATGCGATTTTCATTTGTTTGTTTTCGTGAAATCCCTAAATTTTTTCTAGTTTGATTGCTTTTCATTTGTTTACCACTT TGATTGTTTTTCGTTAAATGCCCTAATTTTATTCTAGTTTGATTGCTATTCCTTATTTCCCTAATTATTTCTCAAATTGT GTGGGTGTGGAGTTTGGGATTATAGTGCAATTTTCTCAATGATGTGATTGTGATTTGTGAGGCTTCATGGTCTCATACTA ATTCTGTCATCTTTCTGCAAGTTTGGAATGATGATAATGCAATTTTTGAATCATTCACTTATTATTGCTTATTTTTTAGG GTTTTGAAACATTGATTAAGTCTGCAGTGAGAGCAAAAATGGACCTCCGAAAACCCAAATCAATGAGGTGCCAAACAGAT GTTGCTCTGAGCATTACTAGGCATTTATTCTCAAAACAAGATAATCAGGACAAGAACATTATCTTCTCGCCCTTCTCTAT CCACGCTGCTCTCAGCGTCATGGCTGCTGGTTCAGATGGCCGCACACTCAACGAGCTTCTTTCCTACCTCCGAGCAGACT CCATTGACCATCTCAGCACCTTCTTCTCTCAGGTCTTCTCCTCCGGCGCTGCTGCACCTTCACGTTGTCTGTCTTTTGCC AATGGAATGTGGGCTGATAAATCCCTTTCACTTTCCTATTCTTTTAAACAACCTTTGGCCACTCATTACAAGGCCACTCT CGGTTCTGTCGATTTCCAGAACAAGGCTGATCAAGTGCGCGGTGAAGTGAATTCGTGGGTTAAAAAAGAGACTAATGGCC TAATTAAAGAGCTTCTTCCTCGTGGTGCATTGGACAAAACAACCAGGCTTATCTTTGCAAATGCACTGCACTTCAAGGGT GAGTGGGAACACCAGTTTGATGCTGGATGTACATTCGATTATAATTTTCACCTCCTTAATGGCACCTCAGTCAAGGTTCC CTTCATGACAAACAAGAAGGACCAGTCTATTAGGGCTTTTGATGGTTTCAAAGTCCTCCGTCTTTCTTATGAACAAGGTA CAGATAAAAACCTCCAGTTCTCCATGTACATTATACTTCCAGATGCCAAAGACGGACTTTCAGCTTTAATTGAAAAGATG GGTTCAGAATCTGGTTTCTTGGAAGGCAAGTTTCCTGAGGAAAAAGTGCAAGTAGGTGGTTTCAGGATTCCAAAATTCAA TTTTTCTTTTGCCTTTGAAGCTTCTAATGTGTTGAAGGAGTTGGGAGTGGTTTCGCCTTTCTCTCAATTGGATGCAGATT TTACAAAAATGGTGGACAATCCCGTGGATGGGTTATACGTTGAAAGTATGTTTCACAAAGCTTCCATTGAGGTAAATGAA AAAGGCACTGAAGCTGGAGCGGCCAGTTCATTGTGGGGGCCAACAAAGTGTATTAAGAGGGGTATCGAATTTATAGCTGA CCACCCTTTCCTCTTCTTGATCAGAGAAGATTTGACCGGAACAATCCTCTTTGTTGGACAGGTGCTCCATCCTAATGGAG TATCCGCACGGGTGAAGGTTAGCAATCTCAATATCTGTTTGCATTTTGTGATTAGGATTGTTCATGATTTTCTTTATTCT GCTGTAGTGGAATAGTTTAAAACGATGGAATGACTAATGATATTAGTGTCTGTTGAATTTTTGTTGTTCTGTGGTGTTTC AGTTTGTTCTTTTCTAGCTATTTGATTGAACCTATCTTGTTTAGCAGTAGCAATCTTATTTAGAAGTTTTGCTCATTATA CTTTTTTTTATTGTGATAGTTTTACTGTTACACAAATAGAAGTTTCTCAATTGTCATTAAATTGAAGAGAAAAAAGAAAG TAGTTGGAGTAAACATGTATTTTCTATTTCTTTGTTACATAAGGCTAAGTATGATGTTGGAAAAGCTTATGAGGATGTTT GTGTGGTAAGTGTGTTATTGGTTTTGTATCTCAAGCTTGGAAGATTTTTTACTGCATTTTGTATAATGAATGAACGTTAA AGAATCTGTATGAAACTTTTCTTCTCAGTCATGTCACATCTTTTTCCTTCCTATCGTGTGGCTTCTAATCTGTGTCATGT CCTTTTCCCTTTTTATTTTCAGTCGTATGATTTCCCTTTTCATTTTCCTTCCTATCGTGATCTTGGGCTATCAAAGAGGA AGAGGCTAACTGAAGATGATGGGGGAGAAGATGTTTTTCTTATTGTAAAGCAAGGAGGTCAAAGTAAAAATAAAGCACGG AGGTCAAAGTCAAAATGAGTGGGTTGAATGAAACATGTAATTGAACGAATATTGGGTACTAAATTTTTTATGTTTGAAGT ACTTTGTAGGTCTGGATATCTCATGCATTATTACTATTTCTGGCACCCTTAAACTGTTTTTGGCTCATTTATTGCAATTA CATGTTACTGGTGCTTCAAGTCTACTGGACTTGTCATTTGTGTATGCTGGATCCAATGGAGGACTAGAATTCTGTTTTAG GCACCCAAAGTCCAAACAGGTGAATGTAGCAGTTTACAATATGAGAAGTTA
CDS sequence (LotjaGi4g1v0333600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCTCCGAAAACCCAAATCAATGAGGTGCCAAACAGATGTTGCTCTGAGCATTACTAGGCATTTATTCTCAAAACA AGATAATCAGGACAAGAACATTATCTTCTCGCCCTTCTCTATCCACGCTGCTCTCAGCGTCATGGCTGCTGGTTCAGATG GCCGCACACTCAACGAGCTTCTTTCCTACCTCCGAGCAGACTCCATTGACCATCTCAGCACCTTCTTCTCTCAGGTCTTC TCCTCCGGCGCTGCTGCACCTTCACGTTGTCTGTCTTTTGCCAATGGAATGTGGGCTGATAAATCCCTTTCACTTTCCTA TTCTTTTAAACAACCTTTGGCCACTCATTACAAGGCCACTCTCGGTTCTGTCGATTTCCAGAACAAGGCTGATCAAGTGC GCGGTGAAGTGAATTCGTGGGTTAAAAAAGAGACTAATGGCCTAATTAAAGAGCTTCTTCCTCGTGGTGCATTGGACAAA ACAACCAGGCTTATCTTTGCAAATGCACTGCACTTCAAGGGTGAGTGGGAACACCAGTTTGATGCTGGATGTACATTCGA TTATAATTTTCACCTCCTTAATGGCACCTCAGTCAAGGTTCCCTTCATGACAAACAAGAAGGACCAGTCTATTAGGGCTT TTGATGGTTTCAAAGTCCTCCGTCTTTCTTATGAACAAGGTACAGATAAAAACCTCCAGTTCTCCATGTACATTATACTT CCAGATGCCAAAGACGGACTTTCAGCTTTAATTGAAAAGATGGGTTCAGAATCTGGTTTCTTGGAAGGCAAGTTTCCTGA GGAAAAAGTGCAAGTAGGTGGTTTCAGGATTCCAAAATTCAATTTTTCTTTTGCCTTTGAAGCTTCTAATGTGTTGAAGG AGTTGGGAGTGGTTTCGCCTTTCTCTCAATTGGATGCAGATTTTACAAAAATGGTGGACAATCCCGTGGATGGGTTATAC GTTGAAAGTATGTTTCACAAAGCTTCCATTGAGGTAAATGAAAAAGGCACTGAAGCTGGAGCGGCCAGTTCATTGTGGGG GCCAACAAAGTGTATTAAGAGGGGTATCGAATTTATAGCTGACCACCCTTTCCTCTTCTTGATCAGAGAAGATTTGACCG GAACAATCCTCTTTGTTGGACAGGTGCTCCATCCTAATGGAGTATCCGCACGGGTGAAGTCGTATGATTTCCCTTTTCAT TTTCCTTCCTATCGTGATCTTGGGCTATCAAAGAGGAAGAGGCTAACTGAAGATGATGGGGGAGAAGATGTTTTTCTTAT TGTAAAGCAAGGAGGTCAAAGTAAAAATAAAGCACGGAGGTCAAAGTCAAAATGA
Protein sequence (LotjaGi4g1v0333600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLRKPKSMRCQTDVALSITRHLFSKQDNQDKNIIFSPFSIHAALSVMAAGSDGRTLNELLSYLRADSIDHLSTFFSQVF SSGAAAPSRCLSFANGMWADKSLSLSYSFKQPLATHYKATLGSVDFQNKADQVRGEVNSWVKKETNGLIKELLPRGALDK TTRLIFANALHFKGEWEHQFDAGCTFDYNFHLLNGTSVKVPFMTNKKDQSIRAFDGFKVLRLSYEQGTDKNLQFSMYIIL PDAKDGLSALIEKMGSESGFLEGKFPEEKVQVGGFRIPKFNFSFAFEASNVLKELGVVSPFSQLDADFTKMVDNPVDGLY VESMFHKASIEVNEKGTEAGAASSLWGPTKCIKRGIEFIADHPFLFLIREDLTGTILFVGQVLHPNGVSARVKSYDFPFH FPSYRDLGLSKRKRLTEDDGGEDVFLIVKQGGQSKNKARRSKSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 7 | 385 | 379 | 7.72E-104 | ||
| PANTHER | 9 | 386 | 378 | 2.3E-125 | – | |
| PANTHER | 9 | 386 | 378 | 2.3E-125 | ||
| Pfam | 12 | 385 | 374 | 1.9E-99 | ||
| SMART | 17 | 385 | 369 | 6.2E-91 | ||
| Gene3D | 31 | 334 | 304 | 3.7E-113 | ||
| Gene3D | 176 | 380 | 205 | 3.7E-113 | ||
| ProSitePatterns | 358 | 368 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi4g1v0333600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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